Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner13i19f
(623 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23C11.05 |||inorganic pyrophosphatase |Schizosaccharomyces p... 213 2e-56
SPAC3A12.02 |||inorganic pyrophosphatase|Schizosaccharomyces pom... 191 6e-50
SPAC15A10.13 |ppk3||serine/threonine protein kinase Ppk3|Schizos... 28 0.95
SPAC1D4.10 |||tRNA endonuclease|Schizosaccharomyces pombe|chr 1|... 26 3.8
SPAC959.09c |apc5|SPAP32A8.01c|anaphase-promoting complex subuni... 26 5.1
SPAC19D5.06c |din1||Dhp1p-interacting protein Din1|Schizosacchar... 25 6.7
SPBC23G7.10c |||NADH-dependent flavin oxidoreductase |Schizosacc... 25 8.9
SPCC1494.09c |||sequence orphan|Schizosaccharomyces pombe|chr 3|... 25 8.9
SPCC18B5.03 |wee1||dual specificity protein kinase Wee1|Schizosa... 25 8.9
SPAC1399.05c |||transcription factor, zf-fungal binuclear cluste... 25 8.9
SPCC663.08c |||short chain dehydrogenase |Schizosaccharomyces po... 25 8.9
SPCC794.12c |mae2||malic enzyme|Schizosaccharomyces pombe|chr 3|... 25 8.9
>SPAC23C11.05 |||inorganic pyrophosphatase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 289
Score = 213 bits (520), Expect = 2e-56
Identities = 96/161 (59%), Positives = 118/161 (73%)
Frame = +3
Query: 141 YIVEERGSPYTPDYRVFFKDEGGPISPMHDIPLWADKAQRLVNMVVEVPRWTNAKMEISL 320
Y E G+ T DY+V+ + G PIS HDIPL+A+ + ++NMVVE+PRWT AK+EI+
Sbjct: 4 YTTREVGALNTLDYQVYVEKNGTPISSWHDIPLYANAEKTILNMVVEIPRWTQAKLEITK 63
Query: 321 GEALNPIKQDVKKGNLRFVNNVFPHRGYIWNYGALPQTWENPNHVDPDTGARGDNDPVDV 500
LNPIKQD KKG LRFV N FPH GYIWNYGA PQT+E+PN V P+T A+GD+DP+DV
Sbjct: 64 EATLNPIKQDTKKGKLRFVRNCFPHHGYIWNYGAFPQTYEDPNVVHPETKAKGDSDPLDV 123
Query: 501 IEIGERVASRGDVYPVKILGTLALIDEGETDWKLIAIDSRD 623
EIGE G V VK+LG +AL+DEGETDWK+I ID D
Sbjct: 124 CEIGEARGYTGQVKQVKVLGVMALLDEGETDWKVIVIDVND 164
>SPAC3A12.02 |||inorganic pyrophosphatase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 286
Score = 191 bits (466), Expect = 6e-50
Identities = 89/170 (52%), Positives = 113/170 (66%)
Frame = +3
Query: 114 ATLKTQVRMYIVEERGSPYTPDYRVFFKDEGGPISPMHDIPLWADKAQRLVNMVVEVPRW 293
A+L + + + G TPD+RV+ PIS HD+PL +DK NMV E+PRW
Sbjct: 2 ASLAKNILQFRSKITGKLNTPDFRVYCYKNNKPISFFHDVPLTSDKDT--FNMVTEIPRW 59
Query: 294 TNAKMEISLGEALNPIKQDVKKGNLRFVNNVFPHRGYIWNYGALPQTWENPNHVDPDTGA 473
T AK EISL +PIKQD+K G LR+V N FP+ G+IWNYGALPQTWE+PN +D T
Sbjct: 60 TQAKCEISLTSPFHPIKQDLKNGKLRYVANSFPYHGFIWNYGALPQTWEDPNVIDSRTKM 119
Query: 474 RGDNDPVDVIEIGERVASRGDVYPVKILGTLALIDEGETDWKLIAIDSRD 623
+GD DP+DV EIG + G + VK+LG L LID+GETDWK++AID D
Sbjct: 120 KGDGDPLDVCEIGGSIGYIGQIKQVKVLGALGLIDQGETDWKILAIDIND 169
>SPAC15A10.13 |ppk3||serine/threonine protein kinase
Ppk3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 637
Score = 28.3 bits (60), Expect = 0.95
Identities = 14/48 (29%), Positives = 20/48 (41%)
Frame = +3
Query: 36 PVCRSIARRLCAVKEPTRVTCSINSTATLKTQVRMYIVEERGSPYTPD 179
P +A R C + R C I +T K+ +YI E P T +
Sbjct: 59 PEWAELADRACETMKTLRHPCIIKYLSTYKSSTHLYIATETVRPVTTE 106
>SPAC1D4.10 |||tRNA endonuclease|Schizosaccharomyces pombe|chr
1|||Manual
Length = 809
Score = 26.2 bits (55), Expect = 3.8
Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Frame = +3
Query: 156 RGSPYTPDY--RVFFKDEGGPISPMHDIPLWADKAQRLVNMVVEVPRWTNAKMEISLGEA 329
RG P T + V+ K+ GP P + + ++++V+E +WTNA + + +
Sbjct: 301 RGEPVTLENGKTVYPKEVIGPSIPGSSFFIIHCPNELVIDLVIENHKWTNAPKPVCVIHS 360
Query: 330 LNP 338
+ P
Sbjct: 361 VTP 363
>SPAC959.09c |apc5|SPAP32A8.01c|anaphase-promoting complex subunit
Apc5 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 737
Score = 25.8 bits (54), Expect = 5.1
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -1
Query: 98 TSYTCRFFNSAQSSCYRPANRNSC 27
TSY C+F NS S Y+ + N C
Sbjct: 254 TSYYCKFLNSWFSGDYQQSVENLC 277
>SPAC19D5.06c |din1||Dhp1p-interacting protein
Din1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 352
Score = 25.4 bits (53), Expect = 6.7
Identities = 15/56 (26%), Positives = 29/56 (51%)
Frame = +3
Query: 192 FKDEGGPISPMHDIPLWADKAQRLVNMVVEVPRWTNAKMEISLGEALNPIKQDVKK 359
F+D+ G + M + L+ + +++ + WT ++ + L AL IKQ VK+
Sbjct: 276 FRDDNGILIEMKE--LFTHQIPKMLRPYFKPNDWTPNRLLVVLEHALEWIKQTVKQ 329
>SPBC23G7.10c |||NADH-dependent flavin oxidoreductase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 395
Score = 25.0 bits (52), Expect = 8.9
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +3
Query: 207 GPISPMHDIPLWADKAQRLVNMVVEVPRWTNAKMEISLGEA 329
G ISP +D LW + + + +VE N K+ I L A
Sbjct: 94 GRISP-NDSGLWMESQMKPLRRIVEFAHSQNQKIGIQLAHA 133
>SPCC1494.09c |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 157
Score = 25.0 bits (52), Expect = 8.9
Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = -2
Query: 385 TLFTNRRLPFFTSCLIGLRASPR-LISIFALV 293
T FT R + FF ++G ASP +F+L+
Sbjct: 67 TNFTLRGIDFFVDTIVGFPASPETTFKVFSLL 98
>SPCC18B5.03 |wee1||dual specificity protein kinase
Wee1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 877
Score = 25.0 bits (52), Expect = 8.9
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = -2
Query: 601 SFQSVSPSSMRASVPRIFTG*TSPRLATRSPISMTSTGSLSPLAPVS 461
SF P VPR + P L +RS + + SLSP+A V+
Sbjct: 86 SFTHSQPQIQAQPVPRRPSLFDRPNLVSRSSSRLGDSPSLSPVAQVA 132
>SPAC1399.05c |||transcription factor, zf-fungal binuclear cluster
type|Schizosaccharomyces pombe|chr 1|||Manual
Length = 529
Score = 25.0 bits (52), Expect = 8.9
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -2
Query: 382 LFTNRRLPFFTSCLIGLRASPRL 314
L+T L T+CLI LR +P L
Sbjct: 157 LYTKSHLMLATACLIALRHNPSL 179
>SPCC663.08c |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 253
Score = 25.0 bits (52), Expect = 8.9
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +3
Query: 195 KDEGGPISPMHDIPLWADKAQRLVNMVVEVPRWTNAKMEISLGEALNPIKQDVKKGNLRF 374
+DEG + +H + D AQ +VN E +++ +AL P K L+
Sbjct: 177 QDEGFIVISIHPGAVRTDSAQEIVNQHAEK---KPEILDLFAKQALTPEKS--ASDMLKV 231
Query: 375 VNNVFP-HRGYIWNY 416
V+N+ P + G +NY
Sbjct: 232 VDNLKPENNGLFYNY 246
>SPCC794.12c |mae2||malic enzyme|Schizosaccharomyces pombe|chr
3|||Manual
Length = 565
Score = 25.0 bits (52), Expect = 8.9
Identities = 10/35 (28%), Positives = 20/35 (57%)
Frame = +3
Query: 279 EVPRWTNAKMEISLGEALNPIKQDVKKGNLRFVNN 383
++ +W++ K I+ G L P+ ++ KK + NN
Sbjct: 430 QIDKWSDGKALIATGSPLPPLNRNGKKYVISQCNN 464
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,406,443
Number of Sequences: 5004
Number of extensions: 50337
Number of successful extensions: 130
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 127
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 129
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 275671126
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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