Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner13i18f
         (658 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC012779-1|AAH12779.1|  408|Homo sapiens potassium channel, subf...    31   2.7  
AF287303-1|AAG32314.1|  408|Homo sapiens tandem pore domain pota...    31   4.8  
BC027588-1|AAH27588.1|  672|Homo sapiens hypothetical protein KI...    30   6.3  
AL360254-1|CAB96175.1|  392|Homo sapiens SCK protein.                  30   6.3  
AL109935-4|CAB91047.2|  672|Homo sapiens novel protein protein.        30   6.3  
AL109935-3|CAI18905.1|  263|Homo sapiens novel protein protein.        30   6.3  
AB037855-1|BAA92672.1|  677|Homo sapiens KIAA1434 protein protein.     30   6.3  
AB001451-1|BAA25798.1|  540|Homo sapiens Sck protein.                  30   6.3  

>BC012779-1|AAH12779.1|  408|Homo sapiens potassium channel,
           subfamily K, member 13 protein.
          Length = 408

 Score = 31.5 bits (68), Expect = 2.7
 Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
 Frame = -1

Query: 151 VCCLRSMEPELSVLVRPRLRQSLVRWSAGCA-ACRRGWL*LKRS 23
           VCC+ S+   +S+L++  L   L +  +GC   C+RG L  +R+
Sbjct: 269 VCCIYSLFNVISILIKQSLNWILRKMDSGCCPQCQRGLLRSRRN 312


>AF287303-1|AAG32314.1|  408|Homo sapiens tandem pore domain
           potassium channel THIK-1 protein.
          Length = 408

 Score = 30.7 bits (66), Expect = 4.8
 Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
 Frame = -1

Query: 151 VCCLRSMEPELSVLVRPRLRQSLVRWSAGCA-ACRRGWL*LKRS 23
           VCC+ S+   +S+L++  L   L +  +GC   C+RG L  +R+
Sbjct: 269 VCCIYSLFNVISILIKQSLDWILRKMDSGCCPQCQRGLLRSRRN 312


>BC027588-1|AAH27588.1|  672|Homo sapiens hypothetical protein
           KIAA1434 protein.
          Length = 672

 Score = 30.3 bits (65), Expect = 6.3
 Identities = 22/62 (35%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
 Frame = +1

Query: 58  RRTLPTNERGSGGGVV-AQEPTTQVPLTASNKHHRARDHATFFFLFDTHLASVFVTVLYT 234
           R  L    RG+G     AQ    Q    AS ++  A  H   F  FD HL+  FV V+Y 
Sbjct: 316 RIPLDVGHRGAGNSTTTAQLAKVQENTIASLRN--AASHGAAFVEFDVHLSKDFVPVVYH 373

Query: 235 SL 240
            L
Sbjct: 374 DL 375


>AL360254-1|CAB96175.1|  392|Homo sapiens SCK protein.
          Length = 392

 Score = 30.3 bits (65), Expect = 6.3
 Identities = 16/34 (47%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
 Frame = +2

Query: 14  ALPRPFESK-PTSPARGAPCRPTNEAL-AEAWSH 109
           A P P E + P+ P R AP  PT E L  E W H
Sbjct: 266 AAPLPLEDQWPSPPTRRAPVAPTEEQLRQEPWYH 299


>AL109935-4|CAB91047.2|  672|Homo sapiens novel protein protein.
          Length = 672

 Score = 30.3 bits (65), Expect = 6.3
 Identities = 22/62 (35%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
 Frame = +1

Query: 58  RRTLPTNERGSGGGVV-AQEPTTQVPLTASNKHHRARDHATFFFLFDTHLASVFVTVLYT 234
           R  L    RG+G     AQ    Q    AS ++  A  H   F  FD HL+  FV V+Y 
Sbjct: 316 RIPLDVGHRGAGNSTTTAQLAKVQENTIASLRN--AASHGAAFVEFDVHLSKDFVPVVYH 373

Query: 235 SL 240
            L
Sbjct: 374 DL 375


>AL109935-3|CAI18905.1|  263|Homo sapiens novel protein protein.
          Length = 263

 Score = 30.3 bits (65), Expect = 6.3
 Identities = 22/62 (35%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
 Frame = +1

Query: 58  RRTLPTNERGSGGGVV-AQEPTTQVPLTASNKHHRARDHATFFFLFDTHLASVFVTVLYT 234
           R  L    RG+G     AQ    Q    AS ++  A  H   F  FD HL+  FV V+Y 
Sbjct: 14  RIPLDVGHRGAGNSTTTAQLAKVQENTIASLRN--AASHGAAFVEFDVHLSKDFVPVVYH 71

Query: 235 SL 240
            L
Sbjct: 72  DL 73


>AB037855-1|BAA92672.1|  677|Homo sapiens KIAA1434 protein protein.
          Length = 677

 Score = 30.3 bits (65), Expect = 6.3
 Identities = 22/62 (35%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
 Frame = +1

Query: 58  RRTLPTNERGSGGGVV-AQEPTTQVPLTASNKHHRARDHATFFFLFDTHLASVFVTVLYT 234
           R  L    RG+G     AQ    Q    AS ++  A  H   F  FD HL+  FV V+Y 
Sbjct: 321 RIPLDVGHRGAGNSTTTAQLAKVQENTIASLRN--AASHGAAFVEFDVHLSKDFVPVVYH 378

Query: 235 SL 240
            L
Sbjct: 379 DL 380


>AB001451-1|BAA25798.1|  540|Homo sapiens Sck protein.
          Length = 540

 Score = 30.3 bits (65), Expect = 6.3
 Identities = 16/34 (47%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
 Frame = +2

Query: 14  ALPRPFESK-PTSPARGAPCRPTNEAL-AEAWSH 109
           A P P E + P+ P R AP  PT E L  E W H
Sbjct: 414 AAPLPLEDQWPSPPTRRAPVAPTEEQLRQEPWYH 447


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,234,816
Number of Sequences: 237096
Number of extensions: 1688374
Number of successful extensions: 4128
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4045
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4128
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7366354010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)