Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner13h20f
         (662 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               25   0.64 
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    23   2.6  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    23   2.6  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   6.0  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   6.0  

>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 25.0 bits (52), Expect = 0.64
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +3

Query: 39  IHTRVAYSYVNSVRVNSWLPRVPAMLMSWT 128
           + TR  + Y + V  NSW+P +   +  WT
Sbjct: 460 LQTRTMHPYDHLVW-NSWMPSIRGAIQQWT 488


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +3

Query: 267 ELLMVYFVNRHGERAPDD 320
           EL  +  + RHG+R PD+
Sbjct: 1   ELKQINVIFRHGDRIPDE 18


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +3

Query: 267 ELLMVYFVNRHGERAPDD 320
           EL  +  + RHG+R PD+
Sbjct: 16  ELKQINVIFRHGDRIPDE 33


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +3

Query: 138 VATMAPFARRTNKMLKYLIFV 200
           V +  P  RRT K++KY +F+
Sbjct: 901 VVSPPPTKRRTMKVVKYHLFL 921


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
            isoform A protein.
          Length = 969

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +3

Query: 138  VATMAPFARRTNKMLKYLIFV 200
            V +  P  RRT K++KY +F+
Sbjct: 939  VVSPPPTKRRTMKVVKYHLFL 959


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,163
Number of Sequences: 438
Number of extensions: 3390
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19977660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)