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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner13h18f
         (651 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC823.15 |ppa1||minor serine/threonine protein phosphatase Ppa...   290   1e-79
SPBC16H5.07c |ppa2||serine/threonine protein phosphatase Ppa2|Sc...   282   4e-77
SPCC1739.12 |ppe1|esp1, ppx1|serine/threonine protein phosphatas...   246   2e-66
SPAC22H10.04 |||protein phosphatase type 2A|Schizosaccharomyces ...   239   2e-64
SPBC26H8.05c |||serine/threonine protein phosphatase |Schizosacc...   228   6e-61
SPBC776.02c |dis2|sds1, bws1|serine/threonine protein phosphatas...   184   1e-47
SPCC31H12.05c |sds21||serine/threonine protein phosphatase Sds21...   175   6e-45
SPAC57A7.08 |pzh1||serine/threonine protein phosphatase Pzh1|Sch...   161   1e-40
SPBP4H10.04 |ppb1||calcineurin catalytic subunit Ppb1|Schizosacc...   157   1e-39
SPBC3F6.01c |||serine/threonine protein phosphatase |Schizosacch...   113   2e-26
SPAC6G9.10c |sen1||ATP-dependent 5' to 3' DNA/RNA helicase Sen1|...    30   0.25 
SPAC823.12 |||zinc finger protein Pep5/Vps11 |Schizosaccharomyce...    29   0.77 
SPAC26F1.10c |pyp1||tyrosine phosphatase Pyp1|Schizosaccharomyce...    27   3.1  
SPAC22G7.01c ||SPAPJ696.03c|aminopeptidase |Schizosaccharomyces ...    27   3.1  
SPCC330.04c |mug135||DUF1773 family protein 3|Schizosaccharomyce...    26   4.1  
SPBC577.07 |ubp10||ubiquitin C-terminal hydrolase Ubp10|Schizosa...    26   5.4  
SPBC29B5.03c |rpl26||60S ribosomal protein L26|Schizosaccharomyc...    26   5.4  
SPAC1D4.12 |rad15|rhp3|transcription factor TFIIH complex subuni...    26   5.4  
SPBC19G7.08c |||arrestin|Schizosaccharomyces pombe|chr 2|||Manual      25   7.2  
SPAC1006.01 |psp3||serine protease Psp3 |Schizosaccharomyces pom...    25   9.5  
SPCC4G3.18 |||conserved fungal family|Schizosaccharomyces pombe|...    25   9.5  
SPAC222.09 |seb1||RNA-binding protein Seb1 |Schizosaccharomyces ...    25   9.5  

>SPAC823.15 |ppa1||minor serine/threonine protein phosphatase
           Ppa1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 309

 Score =  290 bits (711), Expect = 1e-79
 Identities = 125/169 (73%), Positives = 149/169 (88%)
 Frame = +1

Query: 145 MEDKASLKELDQWIQQLNECKQLTENQVKTLCDKAKEILTKESNVQEVKCPVTVCGDVHG 324
           M     + E+D+WI+QL+ C+ L+E  V  +CD AKE+L+ ESNVQ V+CPVTVCGD+HG
Sbjct: 1   MSVSGKIGEVDRWIEQLSRCEPLSEEDVIQMCDLAKEVLSVESNVQSVRCPVTVCGDIHG 60

Query: 325 QFHDLMELFRIGGRSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHES 504
           QFHDLMELF IGG SPDTNYLFMGDYVDRGY+SVETV+LL+A K+RY +RITILRGNHES
Sbjct: 61  QFHDLMELFNIGGPSPDTNYLFMGDYVDRGYHSVETVSLLIAFKIRYPQRITILRGNHES 120

Query: 505 RQITQVYGFYDECLRKYGNASVWKHFTDLFDFLPLTALVDGQIFCLHGG 651
           RQITQVYGFYDECLRKYGNA+VW++FTDLFD+LPLTAL++ +IFCLHGG
Sbjct: 121 RQITQVYGFYDECLRKYGNANVWQYFTDLFDYLPLTALIEDRIFCLHGG 169


>SPBC16H5.07c |ppa2||serine/threonine protein phosphatase
           Ppa2|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 322

 Score =  282 bits (691), Expect = 4e-77
 Identities = 122/165 (73%), Positives = 149/165 (90%)
 Frame = +1

Query: 157 ASLKELDQWIQQLNECKQLTENQVKTLCDKAKEILTKESNVQEVKCPVTVCGDVHGQFHD 336
           A+L ++D+WI+QL +C+ L+E  V+ LCDKA+E+L +E+NVQ V+ PVTVCGD+HGQFHD
Sbjct: 18  ATLGDVDRWIEQLKKCEPLSEADVEMLCDKAREVLCQENNVQPVRNPVTVCGDIHGQFHD 77

Query: 337 LMELFRIGGRSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQIT 516
           LMELF+IGG  PD NYLFMGDYVDRGY+SVETV+LLVA+K+RY  RITILRGNHESRQIT
Sbjct: 78  LMELFKIGGDVPDMNYLFMGDYVDRGYHSVETVSLLVAMKLRYPNRITILRGNHESRQIT 137

Query: 517 QVYGFYDECLRKYGNASVWKHFTDLFDFLPLTALVDGQIFCLHGG 651
           QVYGFYDECLRKYG+A+VWKHFT+LFD+ PLTAL++ +IFCLHGG
Sbjct: 138 QVYGFYDECLRKYGSANVWKHFTNLFDYFPLTALIEDRIFCLHGG 182


>SPCC1739.12 |ppe1|esp1, ppx1|serine/threonine protein phosphatase
           Ppe1 |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 305

 Score =  246 bits (602), Expect = 2e-66
 Identities = 103/161 (63%), Positives = 132/161 (81%)
 Frame = +1

Query: 169 ELDQWIQQLNECKQLTENQVKTLCDKAKEILTKESNVQEVKCPVTVCGDVHGQFHDLMEL 348
           +LD+WI  + +CK L E+Q+K LC+  K IL +ESN+Q V+ PVTVCGD+HGQF+DL+EL
Sbjct: 3   DLDEWIATVRKCKYLPEHQLKRLCEMVKVILMEESNIQPVRTPVTVCGDIHGQFYDLLEL 62

Query: 349 FRIGGRSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYG 528
           FR+GG  P TNY+FMGD+VDRGY+S+ET TL + LK RY ++IT+LRGNHESRQITQVYG
Sbjct: 63  FRVGGELPSTNYIFMGDFVDRGYFSLETFTLFMLLKARYPDKITLLRGNHESRQITQVYG 122

Query: 529 FYDECLRKYGNASVWKHFTDLFDFLPLTALVDGQIFCLHGG 651
           FYDEC  KYGNA+VWK+   +FDFL L A++D +I C+HGG
Sbjct: 123 FYDECQTKYGNANVWKYCCQVFDFLTLAAVIDNKILCVHGG 163


>SPAC22H10.04 |||protein phosphatase type 2A|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 307

 Score =  239 bits (585), Expect = 2e-64
 Identities = 104/161 (64%), Positives = 131/161 (81%)
 Frame = +1

Query: 169 ELDQWIQQLNECKQLTENQVKTLCDKAKEILTKESNVQEVKCPVTVCGDVHGQFHDLMEL 348
           +LD  I++L E + + E+ +  LC  AKE+L +ESNV  +  P+TV GD+HGQF DL+E+
Sbjct: 3   DLDNIIERLYEKQLIAESVIAYLCSLAKEVLMQESNVVRLSTPITVVGDIHGQFDDLLEI 62

Query: 349 FRIGGRSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYG 528
           FRIGG  P TNYLF+GDYVDRGYYS+ET+TLL+ LK+RY +RIT+LRGNHESR ITQ YG
Sbjct: 63  FRIGGPCPYTNYLFLGDYVDRGYYSIETITLLICLKLRYPKRITLLRGNHESRGITQTYG 122

Query: 529 FYDECLRKYGNASVWKHFTDLFDFLPLTALVDGQIFCLHGG 651
           FY ECLRKYGNA+VWK+FTD+FDFL L+A +D  IFC+HGG
Sbjct: 123 FYSECLRKYGNANVWKYFTDIFDFLTLSATIDDTIFCVHGG 163


>SPBC26H8.05c |||serine/threonine protein phosphatase
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 348

 Score =  228 bits (557), Expect = 6e-61
 Identities = 94/161 (58%), Positives = 130/161 (80%)
 Frame = +1

Query: 169 ELDQWIQQLNECKQLTENQVKTLCDKAKEILTKESNVQEVKCPVTVCGDVHGQFHDLMEL 348
           +LD  +++L   + + E+ V  LC + ++IL +ESN+Q +  PVT+CGD+HGQ HDL+EL
Sbjct: 5   DLDWQLEELENGRLIPESNVVELCQRVRDILIEESNIQWISSPVTICGDIHGQLHDLLEL 64

Query: 349 FRIGGRSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYG 528
           FRIGG  P T YLF+GD+VDRG+YSVET  LL+ LK +Y + +T++RGNHESRQITQVYG
Sbjct: 65  FRIGGSCPGTKYLFLGDFVDRGFYSVETFLLLLTLKCKYPKEMTLIRGNHESRQITQVYG 124

Query: 529 FYDECLRKYGNASVWKHFTDLFDFLPLTALVDGQIFCLHGG 651
           FYDEC+RKYG+A+VW++  ++FD+L L ALVDG++FC+HGG
Sbjct: 125 FYDECVRKYGSANVWRYCCEIFDYLSLGALVDGKVFCVHGG 165


>SPBC776.02c |dis2|sds1, bws1|serine/threonine protein phosphatase
           PP1|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 327

 Score =  184 bits (448), Expect = 1e-47
 Identities = 76/148 (51%), Positives = 110/148 (74%)
 Frame = +1

Query: 208 QLTENQVKTLCDKAKEILTKESNVQEVKCPVTVCGDVHGQFHDLMELFRIGGRSPDTNYL 387
           QL+E++++ LC+KA+EI   +  + E++ P+ +CGD+HGQ++DL+ LF  GG  P+ NYL
Sbjct: 28  QLSEDEIRFLCNKAREIFISQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPEANYL 87

Query: 388 FMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDECLRKYGNAS 567
           F+GDYVDRG  S+E + LL+A K++Y E   ILRGNHE   I ++YGFYDEC R+Y N  
Sbjct: 88  FLGDYVDRGKQSLEVICLLLAYKIKYPENFFILRGNHECASINRIYGFYDECKRRY-NIK 146

Query: 568 VWKHFTDLFDFLPLTALVDGQIFCLHGG 651
           +WK FTD F+ LP+ A++D +IF +HGG
Sbjct: 147 LWKTFTDCFNCLPIAAIIDEKIFTMHGG 174


>SPCC31H12.05c |sds21||serine/threonine protein phosphatase
           Sds21|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 322

 Score =  175 bits (425), Expect = 6e-45
 Identities = 71/148 (47%), Positives = 105/148 (70%)
 Frame = +1

Query: 208 QLTENQVKTLCDKAKEILTKESNVQEVKCPVTVCGDVHGQFHDLMELFRIGGRSPDTNYL 387
           QL++ +++ LC  ++ I   +  + E++ P+ +CGD+HGQ+ DL+ LF  GG  PD NYL
Sbjct: 25  QLSDAEIRYLCTTSRSIFLSQPMLLELEAPLKICGDIHGQYSDLLRLFEYGGYPPDANYL 84

Query: 388 FMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDECLRKYGNAS 567
           F+GDYVDRG  S+E + LL A K++Y E   +LRGNHE   I ++YGFYDEC R+Y +  
Sbjct: 85  FLGDYVDRGKQSLEVICLLFAYKIKYPENFFLLRGNHEFASINRIYGFYDECKRRY-SIK 143

Query: 568 VWKHFTDLFDFLPLTALVDGQIFCLHGG 651
           +WK FTD F+ +P+ A++D +IFC+HGG
Sbjct: 144 LWKTFTDCFNCMPVAAVIDEKIFCMHGG 171


>SPAC57A7.08 |pzh1||serine/threonine protein phosphatase
           Pzh1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 515

 Score =  161 bits (390), Expect = 1e-40
 Identities = 71/147 (48%), Positives = 99/147 (67%)
 Frame = +1

Query: 211 LTENQVKTLCDKAKEILTKESNVQEVKCPVTVCGDVHGQFHDLMELFRIGGRSPDTNYLF 390
           L   ++ ++C   +EI   +  + E+  PV + GDVHGQ+ DL+ LF + G  P +NYLF
Sbjct: 214 LKNAEITSICMAVREIFLSQPTLLELTPPVKIVGDVHGQYSDLIRLFEMCGFPPSSNYLF 273

Query: 391 MGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDECLRKYGNASV 570
           +GDYVDRG  S+ET+ LL   K+RY E   +LRGNHE   IT+VYGFYDEC R+  N  +
Sbjct: 274 LGDYVDRGKQSLETILLLFLYKIRYPENFFLLRGNHECANITRVYGFYDECKRRC-NIKI 332

Query: 571 WKHFTDLFDFLPLTALVDGQIFCLHGG 651
           WK F + F+ LP+ ++V G+IFC+HGG
Sbjct: 333 WKTFINTFNCLPIASVVAGKIFCVHGG 359


>SPBP4H10.04 |ppb1||calcineurin catalytic subunit
           Ppb1|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 554

 Score =  157 bits (381), Expect = 1e-39
 Identities = 72/148 (48%), Positives = 99/148 (66%)
 Frame = +1

Query: 208 QLTENQVKTLCDKAKEILTKESNVQEVKCPVTVCGDVHGQFHDLMELFRIGGRSPDTNYL 387
           +L+E Q   +  KA EIL  E N+ EV  PVTVCGD+HGQ++DLM+LF +GG   +T YL
Sbjct: 84  RLSEEQTLYIIKKATEILKSEDNLIEVDAPVTVCGDIHGQYYDLMKLFEVGGNPANTQYL 143

Query: 388 FMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDECLRKYGNAS 567
           F+GDYVDRGY+S+E +  L ALK+ Y + + +LRGNHE   +T  + F  EC  KY N  
Sbjct: 144 FLGDYVDRGYFSIECLLYLWALKIWYPKTLWLLRGNHECAHLTDYFTFKLECTHKY-NIK 202

Query: 568 VWKHFTDLFDFLPLTALVDGQIFCLHGG 651
           V++     F+ LPL A+++ Q  C+HGG
Sbjct: 203 VYEACLQSFNALPLAAIMNKQFLCVHGG 230


>SPBC3F6.01c |||serine/threonine protein phosphatase
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 473

 Score =  113 bits (273), Expect = 2e-26
 Identities = 59/176 (33%), Positives = 98/176 (55%), Gaps = 5/176 (2%)
 Frame = +1

Query: 139 IIMEDKASLKELDQWIQQLNECKQLTENQVKTLCDKAKEILTKESNVQEVKCP----VTV 306
           +I+E + + + ++   ++  + K+L      ++    KE+L K  ++ ++       + +
Sbjct: 155 VILEKQITKEFVEDMKERFCQGKKLPLKFAYSILRDLKELLEKTPSLIDIPVKGDETLVI 214

Query: 307 CGDVHGQFHDLMELFRIGGR-SPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRERITI 483
           CGD HGQ+ DL+ +F++ G  SP   YLF GD+VDRG +S E    L A K+ Y + + I
Sbjct: 215 CGDTHGQYFDLLNIFKLHGPPSPTNKYLFNGDFVDRGSWSTEVAFTLYAYKLLYPDAVFI 274

Query: 484 LRGNHESRQITQVYGFYDECLRKYGNASVWKHFTDLFDFLPLTALVDGQIFCLHGG 651
            RGNHE+  + +VYGF  EC  KY N   +  F++ F  LPL +L+      +HGG
Sbjct: 275 NRGNHETDDMNKVYGFEGECRSKY-NERTFNIFSETFSLLPLGSLISDSYLVVHGG 329


>SPAC6G9.10c |sen1||ATP-dependent 5' to 3' DNA/RNA helicase
            Sen1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1687

 Score = 30.3 bits (65), Expect = 0.25
 Identities = 23/70 (32%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
 Frame = +1

Query: 142  IMEDKASL-KELDQWIQQLNECKQLTENQVKTLCDKAKEI--LTKESNVQEVKCPVTVCG 312
            + ED  SL KEL   I + N  +Q  E        K KE+  L K++    +K    VC 
Sbjct: 1296 VAEDTKSLGKELQNKINEKNLAEQKVEELQSQSFTKNKEVDLLRKKAQKAILKQADVVCA 1355

Query: 313  DVHGQFHDLM 342
             + G  HDL+
Sbjct: 1356 TLSGSGHDLV 1365


>SPAC823.12 |||zinc finger protein Pep5/Vps11 |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 906

 Score = 28.7 bits (61), Expect = 0.77
 Identities = 14/50 (28%), Positives = 27/50 (54%)
 Frame = +1

Query: 133 HIIIMEDKASLKELDQWIQQLNECKQLTENQVKTLCDKAKEILTKESNVQ 282
           +I+++   ASL+ +D W Q +NE   +  +Q      +  +IL K  N++
Sbjct: 767 YIMMLNCFASLENVDSWYQDINEIVNIIVSQRLISPTQLLDILGKSVNIK 816


>SPAC26F1.10c |pyp1||tyrosine phosphatase Pyp1|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 550

 Score = 26.6 bits (56), Expect = 3.1
 Identities = 11/40 (27%), Positives = 19/40 (47%)
 Frame = +1

Query: 514 TQVYGFYDECLRKYGNASVWKHFTDLFDFLPLTALVDGQI 633
           T  Y  +  CL++Y +   WK  T + D  P++     +I
Sbjct: 31  TSKYAVHASCLQEYLDKEAWKDDTLIIDLRPVSEFSKSRI 70


>SPAC22G7.01c ||SPAPJ696.03c|aminopeptidase |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 598

 Score = 26.6 bits (56), Expect = 3.1
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = -1

Query: 570 DGRVAVFPETLVVEAVHLSNLTRFVISSQNGYSLAVT 460
           DG V + P   V      SNLTR  ISS+  + +A +
Sbjct: 247 DGFVKILPYDRVFSDAKNSNLTRIGISSKTSWCIATS 283


>SPCC330.04c |mug135||DUF1773 family protein 3|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 357

 Score = 26.2 bits (55), Expect = 4.1
 Identities = 9/39 (23%), Positives = 25/39 (64%)
 Frame = +1

Query: 166 KELDQWIQQLNECKQLTENQVKTLCDKAKEILTKESNVQ 282
           K +D+W +  +E ++ T+ +++ L +  +EIL  + +++
Sbjct: 209 KSMDEWRKSTDEWRKSTDERLENLLNIVREILDVQRDMR 247


>SPBC577.07 |ubp10||ubiquitin C-terminal hydrolase
           Ubp10|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 502

 Score = 25.8 bits (54), Expect = 5.4
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = -2

Query: 92  Y*VFNVHKIMRNNYFT 45
           Y +F++ + M+NNYFT
Sbjct: 389 YFIFHIKRFMKNNYFT 404


>SPBC29B5.03c |rpl26||60S ribosomal protein L26|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 126

 Score = 25.8 bits (54), Expect = 5.4
 Identities = 12/28 (42%), Positives = 21/28 (75%), Gaps = 2/28 (7%)
 Frame = +1

Query: 448 ALKVRYRERITILRGNHESRQ--ITQVY 525
           +L VR  ++IT++RG+++ R+  IT VY
Sbjct: 46  SLPVRRDDQITVIRGSNKGREGKITSVY 73


>SPAC1D4.12 |rad15|rhp3|transcription factor TFIIH complex subunit
           Rad15|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 772

 Score = 25.8 bits (54), Expect = 5.4
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = -1

Query: 615 RRQGQEIE*IGEVLPDGRVAVFPETLVVEAV 523
           R  G  +    ++ PDG VA FP  L +E++
Sbjct: 517 RNYGNILVEFSKITPDGLVAFFPSYLYLESI 547


>SPBC19G7.08c |||arrestin|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 483

 Score = 25.4 bits (53), Expect = 7.2
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +2

Query: 524 TASTTSVSGNTATRPSGSTSPIYSIS 601
           + STTS S +T+  P G  +PI S S
Sbjct: 174 SVSTTSSSNDTSITPFGDQTPILSSS 199


>SPAC1006.01 |psp3||serine protease Psp3 |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 451

 Score = 25.0 bits (52), Expect = 9.5
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +1

Query: 151 DKASLKELDQWIQQLNECKQLTENQVKTLCDK 246
           DK+ L++  +WI+ L+E + L    V T   K
Sbjct: 89  DKSKLEQHHRWIEHLHEKRSLDFKDVSTFLMK 120


>SPCC4G3.18 |||conserved fungal family|Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 828

 Score = 25.0 bits (52), Expect = 9.5
 Identities = 13/60 (21%), Positives = 26/60 (43%)
 Frame = +1

Query: 124 LITHIIIMEDKASLKELDQWIQQLNECKQLTENQVKTLCDKAKEILTKESNVQEVKCPVT 303
           L   + ++   A +   D ++  LN+C          LC   K +L+K  +V  +  P++
Sbjct: 353 LTLKLFVVIPPAIILSFDSYLDSLNDCLLSESTHTGVLCSSLK-LLSKFLDVTHMNVPLS 411


>SPAC222.09 |seb1||RNA-binding protein Seb1 |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 620

 Score = 25.0 bits (52), Expect = 9.5
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +2

Query: 503 RVRLLKCTASTTSVSGNTATRPSGSTSP 586
           R +L    AST  VS ++A  PS ST+P
Sbjct: 144 RSKLKDAMASTEPVSVDSAAAPSQSTNP 171


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,443,839
Number of Sequences: 5004
Number of extensions: 45061
Number of successful extensions: 184
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 174
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 178
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 293780908
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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