Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner13h06f
(603 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_1145 - 30726506-30726917,30727000-30727167,30727823-30728685 58 7e-09
08_02_0820 - 21542640-21543129,21543244-21543510,21543720-21544015 46 3e-05
01_06_0382 - 28884450-28884662,28884681-28885469 46 3e-05
09_03_0116 + 12482870-12483168,12483253-12483528,12483879-12483906 44 7e-05
08_01_0503 + 4364678-4364976,4365320-4365595,4366091-4366586 44 9e-05
06_03_0800 + 24709590-24710642 41 9e-04
11_01_0256 + 1969292-1969563,1970004-1970270,1970413-1970989 40 0.001
06_03_0798 + 24701885-24702874 40 0.001
12_01_0254 + 1885412-1885683,1886123-1886389,1886501-1887077 40 0.002
03_02_0456 - 8634618-8635062,8635155-8635322,8635414-8635698,863... 38 0.005
09_03_0105 + 12400722-12401041,12401427-12401699,12401788-12401827 38 0.008
07_03_0786 + 21510477-21511451,21512272-21512499 38 0.008
07_03_0779 - 21464249-21464257,21465400-21466374 38 0.008
06_03_0797 - 24697241-24698278 37 0.014
09_03_0107 + 12412772-12413097,12413460-12413732,12414163-12414247 36 0.025
07_03_0781 - 21477797-21478549 36 0.025
07_03_0784 + 21505204-21505950 35 0.057
02_05_0492 - 29476883-29476949,29477030-29477166,29477292-294773... 30 1.2
12_02_1058 - 25735902-25736000,25736085-25736152,25736575-257366... 29 3.7
12_02_0031 - 12477787-12478413,12480182-12480268,12480371-124805... 29 3.7
05_03_0644 + 16527364-16527961,16528048-16528622,16528710-16528877 28 5.0
03_06_0707 - 35655084-35655215,35656088-35656229,35656358-356564... 28 5.0
11_06_0614 - 25530782-25531018,25532053-25532235 28 6.5
>03_05_1145 - 30726506-30726917,30727000-30727167,30727823-30728685
Length = 480
Score = 57.6 bits (133), Expect = 7e-09
Identities = 39/102 (38%), Positives = 49/102 (48%), Gaps = 13/102 (12%)
Frame = +3
Query: 243 LNNAEQLYKGKLLGPE--AFQTFNGELYTSLATGEIVKLTAGGHVTFVTK--------IG 392
L AE ++G++ GPE AF YT +A G +V+ V F G
Sbjct: 142 LRGAEIRFRGEVQGPESVAFDPLGRGPYTGVADGRVVRWDGARWVYFAHSSPNWTAELCG 201
Query: 393 QPCSGLAY---EHICGRPLGFVIDEKTKTLYVADAYHGIWKV 509
S L Y EHICGR LG D +T LY+ADAY G+ KV
Sbjct: 202 HKASPLDYLKDEHICGRALGLRFDRRTGDLYIADAYFGLLKV 243
>08_02_0820 - 21542640-21543129,21543244-21543510,21543720-21544015
Length = 350
Score = 45.6 bits (103), Expect = 3e-05
Identities = 39/128 (30%), Positives = 56/128 (43%), Gaps = 8/128 (6%)
Frame = +3
Query: 150 LIPNIPPYTKFSSIKLEPTKPRTGILESNGLLNNAEQLYKGKLLGPEAFQTFNGELYTSL 329
+I PP T S +K PT + + G+ AE L AF + N +T +
Sbjct: 25 VICEAPPCTTASQVKTTPTNRASHVRLPEGV-TGAESL---------AFDSSNRGPFTGV 74
Query: 330 ATGEIVKL--TAGGHVTFVT----KIGQPCSGLAYE--HICGRPLGFVIDEKTKTLYVAD 485
+ G ++K + G TF + C+ + E CGRPLG KT LY AD
Sbjct: 75 SDGRVLKWGGDSAGWTTFAYNRNYRSNPTCASSSEETESTCGRPLGLAFHLKTGILYFAD 134
Query: 486 AYHGIWKV 509
AY G+ +V
Sbjct: 135 AYKGLMRV 142
>01_06_0382 - 28884450-28884662,28884681-28885469
Length = 333
Score = 45.6 bits (103), Expect = 3e-05
Identities = 32/82 (39%), Positives = 42/82 (51%), Gaps = 13/82 (15%)
Frame = +3
Query: 303 FNGE--LYTSLATGEIVKL--TAGGHVTFVTKIGQP----CSGLAY-----EHICGRPLG 443
F+G+ LYT ++ G ++K +A G TF CS E ICGRPLG
Sbjct: 54 FDGKDGLYTGVSDGRVLKWGGSAAGWTTFAYNANYRKIPLCSSSEVPPEERESICGRPLG 113
Query: 444 FVIDEKTKTLYVADAYHGIWKV 509
+ KT LY+ADAY G+ KV
Sbjct: 114 IRLFRKTGELYIADAYKGLMKV 135
>09_03_0116 + 12482870-12483168,12483253-12483528,12483879-12483906
Length = 200
Score = 44.4 bits (100), Expect = 7e-05
Identities = 19/48 (39%), Positives = 27/48 (56%)
Frame = +3
Query: 366 HVTFVTKIGQPCSGLAYEHICGRPLGFVIDEKTKTLYVADAYHGIWKV 509
H T + + A E +CGRPLG D +T +Y+ADAY G+ +V
Sbjct: 99 HATVAECAARKKAAAAAESVCGRPLGVQFDRRTGEMYIADAYLGLMRV 146
>08_01_0503 + 4364678-4364976,4365320-4365595,4366091-4366586
Length = 356
Score = 44.0 bits (99), Expect = 9e-05
Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 11/84 (13%)
Frame = +3
Query: 291 AFQTFNGELYTSLATGEIVKL--TAGGHVTFV-----TKIGQPCSGLA----YEHICGRP 437
AF + N YT ++ G +++ A G TF KI + +A E +CGRP
Sbjct: 63 AFDSSNHGPYTGVSDGRVLRWGGAAAGWTTFAHHENYRKIPMCTTPVAPAEETESMCGRP 122
Query: 438 LGFVIDEKTKTLYVADAYHGIWKV 509
LG ++T LY+ADAY G+ +V
Sbjct: 123 LGLAFHDRTGDLYIADAYKGLMRV 146
>06_03_0800 + 24709590-24710642
Length = 350
Score = 40.7 bits (91), Expect = 9e-04
Identities = 34/93 (36%), Positives = 47/93 (50%), Gaps = 13/93 (13%)
Frame = +3
Query: 270 GKLLGPEAFQTFNGE---LYTSLATGEIVKLT--AGGHVTFV-----TKIGQPCSGLAY- 416
G L+GPE+ F+G+ Y+ ++ G I++ A G T+ TK S L
Sbjct: 53 GSLVGPESV-AFDGKGRGPYSGVSDGRIMRWNGEAAGWSTYTYSPSYTKNKCAASTLPTV 111
Query: 417 --EHICGRPLGFVIDEKTKTLYVADAYHGIWKV 509
E CGRPLG KT LY+ADAY G+ +V
Sbjct: 112 QTESKCGRPLGLRFHYKTGNLYIADAYMGLMRV 144
>11_01_0256 + 1969292-1969563,1970004-1970270,1970413-1970989
Length = 371
Score = 40.3 bits (90), Expect = 0.001
Identities = 31/84 (36%), Positives = 39/84 (46%), Gaps = 11/84 (13%)
Frame = +3
Query: 282 GPEA--FQTFNGELYTSLATGEIVKLTAGG------HVTFVTKIGQPCSG---LAYEHIC 428
GPE+ F YTS++ G I+K H V ++ C G E C
Sbjct: 48 GPESIVFGDAGDGPYTSVSDGRILKWLPPPERRWVEHSCSVPELLDSCRGSKDTKREQEC 107
Query: 429 GRPLGFVIDEKTKTLYVADAYHGI 500
GRPLG + KT LYVADAY G+
Sbjct: 108 GRPLGLKFNSKTGELYVADAYLGL 131
>06_03_0798 + 24701885-24702874
Length = 329
Score = 40.3 bits (90), Expect = 0.001
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 13/93 (13%)
Frame = +3
Query: 270 GKLLGPEAFQTFNGE---LYTSLATGEIVKLT--AGGHVTFV---TKIGQPCSG-----L 410
G L+GPE+ F+G+ Y+ ++ G +++ A G T+ + C+ +
Sbjct: 50 GSLVGPESV-AFDGKGHGPYSGVSDGRVMRWNGEAAGWSTYTYSPSYTNNKCAASTLPTV 108
Query: 411 AYEHICGRPLGFVIDEKTKTLYVADAYHGIWKV 509
E CGRPLG KT LY+ADAY G+ +V
Sbjct: 109 QTESKCGRPLGLRFHFKTGNLYIADAYMGLMRV 141
>12_01_0254 + 1885412-1885683,1886123-1886389,1886501-1887077
Length = 371
Score = 39.5 bits (88), Expect = 0.002
Identities = 26/70 (37%), Positives = 34/70 (48%), Gaps = 9/70 (12%)
Frame = +3
Query: 318 YTSLATGEIVKLTAGG------HVTFVTKIGQPCSG---LAYEHICGRPLGFVIDEKTKT 470
YTS++ G ++K H V ++ C G E CGRPLG + KT
Sbjct: 62 YTSVSDGRVLKWLPPPERRWVEHSCSVPELLDSCRGSKDTKREQECGRPLGLKFNSKTGE 121
Query: 471 LYVADAYHGI 500
LYVADAY G+
Sbjct: 122 LYVADAYLGL 131
>03_02_0456 -
8634618-8635062,8635155-8635322,8635414-8635698,
8635793-8636178
Length = 427
Score = 38.3 bits (85), Expect = 0.005
Identities = 17/31 (54%), Positives = 20/31 (64%)
Frame = +3
Query: 417 EHICGRPLGFVIDEKTKTLYVADAYHGIWKV 509
E CGRPLG +T LYVADAY+G+ V
Sbjct: 149 ERRCGRPLGLRFHGETGELYVADAYYGLMSV 179
>09_03_0105 + 12400722-12401041,12401427-12401699,12401788-12401827
Length = 210
Score = 37.5 bits (83), Expect = 0.008
Identities = 16/31 (51%), Positives = 20/31 (64%)
Frame = +3
Query: 417 EHICGRPLGFVIDEKTKTLYVADAYHGIWKV 509
E +CGRPLG + LYVADAY G+ +V
Sbjct: 122 ESVCGRPLGLQFHHASGDLYVADAYLGLLRV 152
>07_03_0786 + 21510477-21511451,21512272-21512499
Length = 400
Score = 37.5 bits (83), Expect = 0.008
Identities = 31/91 (34%), Positives = 42/91 (46%), Gaps = 13/91 (14%)
Frame = +3
Query: 276 LLGPE--AFQTFNGELYTSLATGEIVKLTAG--GHVTF-------VTKIGQPCSGLAY-- 416
L+GPE AF F Y+ ++ G I++ G T+ V K P A
Sbjct: 54 LVGPESVAFDKFGDGPYSGVSDGRILRWDGADEGWTTYSHSPGYNVAKCMAPKLHPAELT 113
Query: 417 EHICGRPLGFVIDEKTKTLYVADAYHGIWKV 509
E CGRPLG + LY+ADAY G+ +V
Sbjct: 114 ESKCGRPLGLRFHNTSGNLYIADAYKGLMRV 144
>07_03_0779 - 21464249-21464257,21465400-21466374
Length = 327
Score = 37.5 bits (83), Expect = 0.008
Identities = 31/91 (34%), Positives = 42/91 (46%), Gaps = 13/91 (14%)
Frame = +3
Query: 276 LLGPE--AFQTFNGELYTSLATGEIVKLTAG--GHVTF-------VTKIGQPCSGLAY-- 416
L+GPE AF F Y+ ++ G I++ G T+ V K P A
Sbjct: 54 LVGPESVAFDKFGDGPYSGVSDGRILRWDGADKGWTTYSHAPGYNVAKCMAPKLHPAELT 113
Query: 417 EHICGRPLGFVIDEKTKTLYVADAYHGIWKV 509
E CGRPLG + LY+ADAY G+ +V
Sbjct: 114 ESKCGRPLGLRFHNTSGNLYIADAYKGLMRV 144
>06_03_0797 - 24697241-24698278
Length = 345
Score = 36.7 bits (81), Expect = 0.014
Identities = 32/93 (34%), Positives = 46/93 (49%), Gaps = 13/93 (13%)
Frame = +3
Query: 270 GKLLGPEAFQTFNGE---LYTSLATGEIVKLT--AGGHVTFV-----TKIGQPCSGLAY- 416
G L+GPE+ F+G+ Y+ ++ G +++ A G T+ TK S L
Sbjct: 49 GSLVGPESV-AFDGKGRGPYSGVSDGRVMRWNGEAAGWSTYTYSPSYTKNKCAASTLPTV 107
Query: 417 --EHICGRPLGFVIDEKTKTLYVADAYHGIWKV 509
E CGR LG KT LY+ADAY G+ +V
Sbjct: 108 QTESKCGRSLGLRFHFKTGNLYIADAYMGLMRV 140
>09_03_0107 + 12412772-12413097,12413460-12413732,12414163-12414247
Length = 227
Score = 35.9 bits (79), Expect = 0.025
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = +3
Query: 417 EHICGRPLGFVIDEKTKTLYVADAYHGI 500
E +CGRPLG + LYVADAY G+
Sbjct: 124 ESVCGRPLGLQFHHASGDLYVADAYLGL 151
>07_03_0781 - 21477797-21478549
Length = 250
Score = 35.9 bits (79), Expect = 0.025
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +3
Query: 417 EHICGRPLGFVIDEKTKTLYVADAYHGIWKV 509
E CGRPLG + LY+ADAY G+ +V
Sbjct: 12 ESKCGRPLGLRFHNTSGNLYIADAYKGLMRV 42
>07_03_0784 + 21505204-21505950
Length = 248
Score = 34.7 bits (76), Expect = 0.057
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +3
Query: 417 EHICGRPLGFVIDEKTKTLYVADAYHGIWKV 509
E CGRPLG + Y+ADAY G+ +V
Sbjct: 12 ESKCGRPLGLRFHNTSGNFYIADAYRGLMRV 42
>02_05_0492 -
29476883-29476949,29477030-29477166,29477292-29477383,
29477490-29477587,29477677-29477804,29477883-29478026,
29478108-29478397,29478553-29478739,29479085-29479210,
29480488-29480538,29480952-29481002,29482639-29484054
Length = 928
Score = 30.3 bits (65), Expect = 1.2
Identities = 18/60 (30%), Positives = 31/60 (51%)
Frame = -3
Query: 241 SPFDSNIPVLGFVGSNLMLENLVYGGMFGISTTAIAKTAMYNANFSSLFINPVISPIMYF 62
SP+ N+ V+ +G N + E + + + + T + A + + FSSL NP SP+ F
Sbjct: 105 SPYSWNL-VVDLLGKNRLFEPM-WDTVSSMRTQGLLSLATFASVFSSLAANPASSPLRAF 162
>12_02_1058 -
25735902-25736000,25736085-25736152,25736575-25736638,
25736838-25736919,25737503-25737561,25737664-25737723,
25737884-25738046,25738236-25738360,25738827-25738859,
25739098-25739160,25739364-25739423,25739972-25740196,
25740272-25740433
Length = 420
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/44 (27%), Positives = 24/44 (54%)
Frame = +3
Query: 168 PYTKFSSIKLEPTKPRTGILESNGLLNNAEQLYKGKLLGPEAFQ 299
P + S +E + IL+++ E++Y+G+L+GP F+
Sbjct: 241 PQWRASGYDVESSASSDAILKASAAREAIEKVYQGQLVGPSTFE 284
>12_02_0031 -
12477787-12478413,12480182-12480268,12480371-12480562,
12480638-12480766,12480840-12480926,12483076-12483537,
12485088-12485222
Length = 572
Score = 28.7 bits (61), Expect = 3.7
Identities = 22/87 (25%), Positives = 38/87 (43%)
Frame = +3
Query: 339 EIVKLTAGGHVTFVTKIGQPCSGLAYEHICGRPLGFVIDEKTKTLYVADAYHGIWKVDLI 518
+I+ GG +T GQ + RP +DE T L A +YH + + +
Sbjct: 96 DIMDTRIGGRITKGISGGQRKRVSICVEMLTRPRLLFLDEPTSGLDSAASYHVMSHITSV 155
Query: 519 TDKKQLLVSPRVEIQGKVPKIFNSIIL 599
+ + V V G+V ++F+S+ L
Sbjct: 156 AAGEGMTVVAAVHQPGEVFELFHSLCL 182
>05_03_0644 + 16527364-16527961,16528048-16528622,16528710-16528877
Length = 446
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/27 (40%), Positives = 20/27 (74%)
Frame = -1
Query: 303 KFGMLLVPAISLYIVVQHYLEAHSIPI 223
K G+LL P+++ Y++ Q +L+ S+PI
Sbjct: 311 KIGLLL-PSVNFYLIAQRFLKELSLPI 336
>03_06_0707 -
35655084-35655215,35656088-35656229,35656358-35656485,
35656852-35656944,35657183-35657252,35657324-35657445,
35658143-35658265,35659453-35659710,35659995-35660074,
35660244-35660389,35660773-35660906,35661001-35661137,
35663013-35663135,35663521-35663590,35663925-35664050,
35664166-35664393
Length = 703
Score = 28.3 bits (60), Expect = 5.0
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 7/57 (12%)
Frame = +3
Query: 336 GEIVKLTAGGHVTFVTKIGQPCSGLA---YEHICGRPLG----FVIDEKTKTLYVAD 485
G I+ +T +I + C+G+A +E++CGRP+G I T++++D
Sbjct: 503 GNIISVTIPVMFGRYLEIPKSCNGVARFDFEYLCGRPVGAADYIAIARNYHTIFISD 559
>11_06_0614 - 25530782-25531018,25532053-25532235
Length = 139
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +2
Query: 14 PNQSPEVFLRQKSLNSEVHDGANNRINKKAAK 109
PN + ++ +K LN+ VH+G + R NKK K
Sbjct: 16 PN-ADDILDLEKGLNAHVHEGTSMRKNKKKKK 46
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,038,714
Number of Sequences: 37544
Number of extensions: 337592
Number of successful extensions: 736
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 719
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 736
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1431112012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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