Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner13f20r
(702 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase ... 26 0.40
AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase ... 26 0.40
AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein. 25 0.92
DQ855482-1|ABH88169.1| 116|Apis mellifera chemosensory protein ... 23 2.1
AJ973399-1|CAJ01446.1| 116|Apis mellifera hypothetical protein ... 23 2.1
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 23 2.8
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 23 2.8
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 23 2.8
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 23 3.7
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 22 6.5
DQ468657-1|ABE02558.1| 322|Apis mellifera 1,4,5-trisphosphate r... 21 8.6
AB006152-1|BAA24504.1| 178|Apis mellifera inositol 1,4,5-tripho... 21 8.6
>AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase
protein.
Length = 492
Score = 25.8 bits (54), Expect = 0.40
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +2
Query: 152 DLQIFI*NKQ*EYIYFIMYDF 214
D +I I N + E YFI+YDF
Sbjct: 371 DTEILIGNNENEGTYFILYDF 391
>AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase
protein.
Length = 628
Score = 25.8 bits (54), Expect = 0.40
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +2
Query: 152 DLQIFI*NKQ*EYIYFIMYDF 214
D +I I N + E YFI+YDF
Sbjct: 371 DTEILIGNNENEGTYFILYDF 391
>AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein.
Length = 366
Score = 24.6 bits (51), Expect = 0.92
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = -1
Query: 318 KLACNFISHIFYI*HCNVKVT 256
KLA +I +F + HCN++ T
Sbjct: 295 KLATRYIDFLFQVLHCNMENT 315
>DQ855482-1|ABH88169.1| 116|Apis mellifera chemosensory protein 1
protein.
Length = 116
Score = 23.4 bits (48), Expect = 2.1
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -3
Query: 253 EFYLDKYVWT*IDEIIHN 200
E Y DKY + IDEI+ N
Sbjct: 21 ELYSDKYDYVNIDEILAN 38
>AJ973399-1|CAJ01446.1| 116|Apis mellifera hypothetical protein
protein.
Length = 116
Score = 23.4 bits (48), Expect = 2.1
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -3
Query: 253 EFYLDKYVWT*IDEIIHN 200
E Y DKY + IDEI+ N
Sbjct: 21 ELYSDKYDYVNIDEILAN 38
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 23.0 bits (47), Expect = 2.8
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -2
Query: 467 ILIKDNTLFLNTKYKIIETLSNK 399
+ +KDN L N Y +IE + K
Sbjct: 92 LAVKDNKLASNAGYNVIEQVRTK 114
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 23.0 bits (47), Expect = 2.8
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -2
Query: 467 ILIKDNTLFLNTKYKIIETLSNK 399
+ +KDN L N Y +IE + K
Sbjct: 92 LAVKDNKLASNAGYNVIEQVRTK 114
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 23.0 bits (47), Expect = 2.8
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -2
Query: 467 ILIKDNTLFLNTKYKIIETLSNK 399
+ +KDN L N Y +IE + K
Sbjct: 92 LAVKDNKLASNAGYNVIEQVRTK 114
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 22.6 bits (46), Expect = 3.7
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -2
Query: 452 NTLFLNTKYKIIETLSNKCTYRVVLYS 372
+T LNTK +E +KC+ V YS
Sbjct: 347 STETLNTKCNTLERTPSKCSQTSVHYS 373
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 21.8 bits (44), Expect = 6.5
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -2
Query: 425 KIIETLSNKCTY 390
KII +LSN C Y
Sbjct: 302 KIISSLSNSCNY 313
>DQ468657-1|ABE02558.1| 322|Apis mellifera 1,4,5-trisphosphate
receptor protein.
Length = 322
Score = 21.4 bits (43), Expect = 8.6
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -2
Query: 467 ILIKDNTLFLNTKYKIIETL 408
+L K+ L ++TK KIIE L
Sbjct: 36 LLKKEYPLVMDTKLKIIEIL 55
>AB006152-1|BAA24504.1| 178|Apis mellifera inositol
1,4,5-triphosphate recepter protein.
Length = 178
Score = 21.4 bits (43), Expect = 8.6
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -2
Query: 467 ILIKDNTLFLNTKYKIIETL 408
+L K+ L ++TK KIIE L
Sbjct: 4 LLKKEYPLVMDTKLKIIEIL 23
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,480
Number of Sequences: 438
Number of extensions: 3756
Number of successful extensions: 13
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21561255
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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