Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner13f18f
(660 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC3F6.01c |||serine/threonine protein phosphatase |Schizosacch... 82 8e-17
SPCC645.14c |sti1||chaperone activator Sti1 |Schizosaccharomyces... 71 1e-13
SPAC1142.02c ||SPAC17G6.19c|TPR repeat protein|Schizosaccharomyc... 60 3e-10
SPBC543.02c |||DNAJ/TPR domain protein DNAJC7 family|Schizosacch... 54 2e-08
SPAC6B12.12 |tom70||mitochondrial TOM complex subunit Tom70|Schi... 45 8e-06
SPCC338.16 |pof3||F-box protein Pof3|Schizosaccharomyces pombe|c... 40 3e-04
SPAC17A2.04c |||HSP chaperone complex subunit |Schizosaccharomyc... 39 7e-04
SPAC17A5.12 |ucp7||UBA/TPR/DNAJ domain protein Ucp7|Schizosaccha... 36 0.004
SPBC23E6.09 |ssn6||transcriptional corepressor Ssn6|Schizosaccha... 34 0.016
SPAC2F3.02 |||ER protein translocation subcomplex subunit|Schizo... 34 0.016
SPBC418.02 |||NatA N-acetyltransferase complex subunit |Schizosa... 31 0.15
SPBC725.07 |pex5||peroxisomal targeting signal receptor |Schizos... 31 0.19
SPAC7D4.11c |sec39||secretory pathway protein Sec39 |Schizosacch... 28 1.0
SPBC1A4.03c |top2|ptr11|DNA topoisomerase II|Schizosaccharomyces... 27 1.8
SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1... 27 1.8
SPAC6F12.15c |cut9|dre1|anaphase-promoting complex subunit Cut9|... 27 2.4
SPAC11H11.01 |sst6|cps23|ESCRT I complex subunit Vps23|Schizosac... 26 4.2
SPCC285.14 |||TRAPP complex subunit Trs130 |Schizosaccharomyces ... 25 9.7
>SPBC3F6.01c |||serine/threonine protein phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 473
Score = 81.8 bits (193), Expect = 8e-17
Identities = 40/100 (40%), Positives = 63/100 (63%)
Frame = +3
Query: 357 ELKIKGNECVKDGKFIEAVLHYTQAIKMDPNNYILHSNRSFAFLKLDQHYLSLQDANETV 536
ELK + N+ +K+G ++A+ YT+AI++D N IL+SNRS A LK + + L++ DA++ +
Sbjct: 7 ELKNEANKFLKEGHIVQAIDLYTKAIELDSTNAILYSNRSLAHLKSEDYGLAINDASKAI 66
Query: 537 RLQPQWAKGYFRRAEVEAASGLYDEAIISYTHALQLDPQN 656
P++AK YFRRA A EA+ + AL L P +
Sbjct: 67 ECDPEYAKAYFRRATAHIAIFQPKEAVGDFRKALALAPSD 106
>SPCC645.14c |sti1||chaperone activator Sti1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 591
Score = 70.9 bits (166), Expect = 1e-13
Identities = 37/101 (36%), Positives = 54/101 (53%)
Frame = +3
Query: 354 EELKIKGNECVKDGKFIEAVLHYTQAIKMDPNNYILHSNRSFAFLKLDQHYLSLQDANET 533
EELK KGN + A+ ++TQAI +D N+IL+SNRS + + +L+DA +
Sbjct: 3 EELKAKGNAAFSKKDYKTAIDYFTQAIGLDERNHILYSNRSACYASEKDYADALKDATKC 62
Query: 534 VRLQPQWAKGYFRRAEVEAASGLYDEAIISYTHALQLDPQN 656
L+P WAKG+ R+ G D A +Y L+ D N
Sbjct: 63 TELKPDWAKGWSRKGAALHGLGDLDAARSAYEEGLKHDANN 103
Score = 64.5 bits (150), Expect = 1e-11
Identities = 33/102 (32%), Positives = 54/102 (52%)
Frame = +3
Query: 342 PTTVEELKIKGNECVKDGKFIEAVLHYTQAIKMDPNNYILHSNRSFAFLKLDQHYLSLQD 521
P EE ++KGNE K G F A+ YT+ K P++ NR+ A+LK+ ++D
Sbjct: 396 PDKAEESRVKGNELFKSGDFANAIKEYTEMTKRAPSDPRGFGNRAAAYLKVMAPAECIRD 455
Query: 522 ANETVRLQPQWAKGYFRRAEVEAASGLYDEAIISYTHALQLD 647
N+ + L P +AK Y R+A+ Y++ I + A ++D
Sbjct: 456 CNKAIELDPNFAKAYVRKAQALFMLKDYNKCIDACNEASEVD 497
>SPAC1142.02c ||SPAC17G6.19c|TPR repeat protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 60.1 bits (139), Expect = 3e-10
Identities = 31/102 (30%), Positives = 57/102 (55%)
Frame = +3
Query: 354 EELKIKGNECVKDGKFIEAVLHYTQAIKMDPNNYILHSNRSFAFLKLDQHYLSLQDANET 533
E+LK++GN + + +A+ YT+AI++DP + + +SNR+ A+ +L Q +++DA
Sbjct: 84 EKLKLEGNNAIAAKDYQKALDLYTKAIEIDPTSPVYYSNRAAAYNQLGQFENAVEDALTC 143
Query: 534 VRLQPQWAKGYFRRAEVEAASGLYDEAIISYTHALQLDPQNQ 659
+ L P A+ + R + + G A +Y L DP N+
Sbjct: 144 LSLDPHHARAFGRLGRAKLSLGDAAAAADAYKKGLDFDPNNE 185
>SPBC543.02c |||DNAJ/TPR domain protein DNAJC7
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 476
Score = 53.6 bits (123), Expect = 2e-08
Identities = 31/119 (26%), Positives = 62/119 (52%), Gaps = 4/119 (3%)
Frame = +3
Query: 303 CLLKNTIMDEAKKPTTVEELKIKGNECVKDGKFIEAVLHYTQAIKMDPNNYI----LHSN 470
C T+ + +K +E K +GN+ + G + +A Y++A+++DP+N L+ N
Sbjct: 210 CTTAKTLFKQVRK---LENTKNQGNDLFRQGNYQDAYEKYSEALQIDPDNKETVAKLYMN 266
Query: 471 RSFAFLKLDQHYLSLQDANETVRLQPQWAKGYFRRAEVEAASGLYDEAIISYTHALQLD 647
R+ L+L + +L D++ + + + KG RA+ A ++EA+ A++LD
Sbjct: 267 RATVLLRLKRPEEALSDSDNALAIDSSYLKGLKVRAKAHEALEKWEEAVRDVQSAIELD 325
Score = 45.2 bits (102), Expect = 8e-06
Identities = 27/89 (30%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Frame = +3
Query: 354 EELKIKGNECVKDGKFIEAVLHYTQAIKM--DPNNYILHSNRSFAFLKLDQHYLSLQDAN 527
E+ K GN K+ K+ EA+ YT+AI + D I +SNR+ ++++ + L+L DA
Sbjct: 24 EKQKAIGNAFYKEKKYAEAIKAYTEAIDLGSDSALAIYYSNRAATYMQIGEFELALCDAK 83
Query: 528 ETVRLQPQWAKGYFRRAEVEAASGLYDEA 614
++ R++P K R + + +EA
Sbjct: 84 QSDRIKPDVPKTQSRIRQAYEGLSILNEA 112
Score = 29.5 bits (63), Expect = 0.45
Identities = 25/106 (23%), Positives = 45/106 (42%)
Frame = +3
Query: 342 PTTVEELKIKGNECVKDGKFIEAVLHYTQAIKMDPNNYILHSNRSFAFLKLDQHYLSLQD 521
P VE L ++G G+ +A+ H+ +A+K+DP+ + F ++ + +
Sbjct: 174 PKNVEALVLRGKVMYYSGENAKAITHFQEALKLDPDC----TTAKTLFKQVRKLENTKNQ 229
Query: 522 ANETVRLQPQWAKGYFRRAEVEAASGLYDEAIISYTHALQLDPQNQ 659
N+ R G Y +A Y+ ALQ+DP N+
Sbjct: 230 GNDLFR------------------QGNYQDAYEKYSEALQIDPDNK 257
>SPAC6B12.12 |tom70||mitochondrial TOM complex subunit
Tom70|Schizosaccharomyces pombe|chr 1|||Manual
Length = 625
Score = 45.2 bits (102), Expect = 8e-06
Identities = 27/102 (26%), Positives = 48/102 (47%)
Frame = +3
Query: 324 MDEAKKPTTVEELKIKGNECVKDGKFIEAVLHYTQAIKMDPNNYILHSNRSFAFLKLDQH 503
M + ++ ELK GN+ ++ A+ +YTQAI ++ I SNR+ + +
Sbjct: 142 MTKEERAKLAAELKTLGNKAYGQKEYANAIDYYTQAITCS-HDPIFFSNRAACYAAIGDF 200
Query: 504 YLSLQDANETVRLQPQWAKGYFRRAEVEAASGLYDEAIISYT 629
++D +E + L + K RR+ G DEA++ T
Sbjct: 201 EQVIKDTSEALSLDSSYVKALNRRSAAYEQLGKLDEALMDST 242
Score = 32.3 bits (70), Expect = 0.064
Identities = 19/85 (22%), Positives = 40/85 (47%)
Frame = +3
Query: 393 GKFIEAVLHYTQAIKMDPNNYILHSNRSFAFLKLDQHYLSLQDANETVRLQPQWAKGYFR 572
G+F EA+ Y ++I +D + H A K S++ + + P ++ Y
Sbjct: 429 GEFAEAISDYQKSIALDDSFIYSHIQLGVAQYKTHAIAESMKTFEDCKKRFPNSSEVYNY 488
Query: 573 RAEVEAASGLYDEAIISYTHALQLD 647
E+ +D+A+ ++ HA++L+
Sbjct: 489 FGEILLDQQKFDDAVKNFDHAIELE 513
>SPCC338.16 |pof3||F-box protein Pof3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 577
Score = 39.9 bits (89), Expect = 3e-04
Identities = 27/99 (27%), Positives = 48/99 (48%), Gaps = 1/99 (1%)
Frame = +3
Query: 351 VEELKIKGNECVKDGKFIEAVLHYTQAIKMDPNNYI-LHSNRSFAFLKLDQHYLSLQDAN 527
V+ +K K + + KF +A+ T+ I+ +PN I L R+ + K Q+ + DA
Sbjct: 6 VKAIKEKTQQYLSKRKFEDALTFITKTIEQEPNPTIDLFELRAQVYEKSGQYSQAELDAK 65
Query: 528 ETVRLQPQWAKGYFRRAEVEAASGLYDEAIISYTHALQL 644
+ L + A+GY R ++ G +A YT L++
Sbjct: 66 RMIHLNARNARGYLRLGKLLQLDGFDKKADQLYTQGLRM 104
>SPAC17A2.04c |||HSP chaperone complex subunit |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 358
Score = 38.7 bits (86), Expect = 7e-04
Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 4/99 (4%)
Frame = +3
Query: 330 EAKKPTTVEELKIKGNECVKDGKFIEAVLHYTQAIKM---DPNNYIL-HSNRSFAFLKLD 497
E + + + GNEC ++ +A YT+A+ D + I +SNR+ L +
Sbjct: 57 EGEPHEVAQNFREHGNECFASKRYKDAEEFYTKALAQKCGDKDIEIACYSNRAACNLLFE 116
Query: 498 QHYLSLQDANETVRLQPQWAKGYFRRAEVEAASGLYDEA 614
+ L D + ++ AK Y+R A+ A YDEA
Sbjct: 117 NYRQVLNDCAQVLQRDSTHAKAYYRSAKALVALKRYDEA 155
>SPAC17A5.12 |ucp7||UBA/TPR/DNAJ domain protein
Ucp7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 697
Score = 36.3 bits (80), Expect = 0.004
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
Frame = +3
Query: 351 VEELKIKGNECVKDGKFIEAVLHYTQAIKMDPNNYI----LHSNRSFAFLKLDQHYLSLQ 518
VEE + GNE + G F +A+ +T ++ P + L SNRS + K+ LQ
Sbjct: 412 VEEQQSTGNELFRKGDFSQAIEEFTNSLSQLPAKHTKRVPLLSNRSLCYQKVGDLKTCLQ 471
Query: 519 DANETV 536
D +E V
Sbjct: 472 DVDELV 477
>SPBC23E6.09 |ssn6||transcriptional corepressor
Ssn6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1102
Score = 34.3 bits (75), Expect = 0.016
Identities = 23/105 (21%), Positives = 47/105 (44%), Gaps = 1/105 (0%)
Frame = +3
Query: 345 TTVEELKIKGNECVKDGKFIEAVLHYTQAIKMDPNNYILHSNRSFAFLKLDQHYLSLQDA 524
T + + G V K+ +A Y QA+ D N + + +++Q+ +L
Sbjct: 582 TDAQSWYLIGRCYVAQQKYNKAYEAYQQAVYRDGRNPTFWCSIGVLYYQINQYQDALDAY 641
Query: 525 NETVRLQPQWAKGYFRRAEV-EAASGLYDEAIISYTHALQLDPQN 656
+ +RL P ++ ++ + E+ +A+ +Y A +LDP N
Sbjct: 642 SRAIRLNPYISEVWYDLGTLYESCHNQISDALDAYQRAAELDPTN 686
>SPAC2F3.02 |||ER protein translocation subcomplex
subunit|Schizosaccharomyces pombe|chr 1|||Manual
Length = 192
Score = 34.3 bits (75), Expect = 0.016
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 13/103 (12%)
Frame = +3
Query: 345 TTVEELKIKGNECVKDGKFIEAVLHYTQAIKMDPNNY-------------ILHSNRSFAF 485
T V ++K NE K K+ EA Y A+++ N ++ NR+ A
Sbjct: 60 TQVNKMKQTANEAFKRKKYEEAKKLYGLALQLALNRCTWEPSILTREEASVMLCNRAAAE 119
Query: 486 LKLDQHYLSLQDANETVRLQPQWAKGYFRRAEVEAASGLYDEA 614
+ L Q +L DAN ++++ + K Y+R+A+ A +EA
Sbjct: 120 IALSQFPEALADANAALKIRNNYGKCYYRKAKALEAMHRIEEA 162
>SPBC418.02 |||NatA N-acetyltransferase complex subunit
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 31.1 bits (67), Expect = 0.15
Identities = 23/107 (21%), Positives = 42/107 (39%)
Frame = +3
Query: 336 KKPTTVEELKIKGNECVKDGKFIEAVLHYTQAIKMDPNNYILHSNRSFAFLKLDQHYLSL 515
KKP + + + G K A+L A +DP + + + + + SL
Sbjct: 37 KKPKHPDSVALLGLNLCKLHDSRSALLKCGYASSIDPKSQFCWHALAIVYRETKDYNNSL 96
Query: 516 QDANETVRLQPQWAKGYFRRAEVEAASGLYDEAIISYTHALQLDPQN 656
+ + + P ++ A ++A GLY ++ LQLD N
Sbjct: 97 KCYQNALAISPNNESLWYDAAYLQAQLGLYQPLFDNWNRLLQLDSSN 143
>SPBC725.07 |pex5||peroxisomal targeting signal receptor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 598
Score = 30.7 bits (66), Expect = 0.19
Identities = 16/65 (24%), Positives = 32/65 (49%)
Frame = +3
Query: 420 YTQAIKMDPNNYILHSNRSFAFLKLDQHYLSLQDANETVRLQPQWAKGYFRRAEVEAASG 599
+ QA++ +P+N IL + A +++ ++ N V LQPQ+ + A G
Sbjct: 461 FRQALQDEPSNEILWNKLGAALTNAEKNTEAVSSYNRAVSLQPQYVRVRSNMAVSNINLG 520
Query: 600 LYDEA 614
+++A
Sbjct: 521 YFEDA 525
>SPAC7D4.11c |sec39||secretory pathway protein Sec39
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 769
Score = 28.3 bits (60), Expect = 1.0
Identities = 25/97 (25%), Positives = 42/97 (43%), Gaps = 3/97 (3%)
Frame = +3
Query: 282 IVSS*TFCLLKNTIMDEAKKPTTVE---ELKIKGNECVKDGKFIEAVLHYTQAIKMDPNN 452
+VS T + +++E T VE KIK E ++D F E + DP N
Sbjct: 663 VVSYWTDFQSNSKVLEENLNTTDVEFHSSKKIKDYEDLEDANFDEEWSKAADLMSDDPEN 722
Query: 453 YILHSNRSFAFLKLDQHYLSLQDANETVRLQPQWAKG 563
+L+ + L L++ S+ D N T ++ + G
Sbjct: 723 QVLYEGNLNSSLSLNED-PSVSDENLTQKVTSKLTNG 758
>SPBC1A4.03c |top2|ptr11|DNA topoisomerase II|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1485
Score = 27.5 bits (58), Expect = 1.8
Identities = 10/37 (27%), Positives = 19/37 (51%)
Frame = +3
Query: 303 CLLKNTIMDEAKKPTTVEELKIKGNECVKDGKFIEAV 413
C ++N D K T ++ G++C KF++A+
Sbjct: 411 CQIENPSFDSQTKETLTTKVSAFGSQCTLSDKFLKAI 447
>SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1
complex subunit Tpr1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1039
Score = 27.5 bits (58), Expect = 1.8
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 10/58 (17%)
Frame = +3
Query: 399 FIEAVLHYTQAIKMDPNN--------YILHSNRSF--AFLKLDQHYLSLQDANETVRL 542
+I+A+ Y QAIK DP N IL NR F A L L + +++DA + +
Sbjct: 650 YIKAIQSYDQAIKFDPKNAHAAQGIAIILAQNRQFSKALLILSKVREAIKDATTLINI 707
>SPAC6F12.15c |cut9|dre1|anaphase-promoting complex subunit
Cut9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 671
Score = 27.1 bits (57), Expect = 2.4
Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 7/68 (10%)
Frame = +3
Query: 462 HSNRSFAFLKLDQHYLSLQDANETVR-------LQPQWAKGYFRRAEVEAASGLYDEAII 620
H ++ +L + +YL + +E R + PQ+ + A A G +D+AI
Sbjct: 369 HPEKAVTWLAVGIYYLCVNKISEARRYFSKSSTMDPQFGPAWIGFAHSFAIEGEHDQAIS 428
Query: 621 SYTHALQL 644
+YT A +L
Sbjct: 429 AYTTAARL 436
>SPAC11H11.01 |sst6|cps23|ESCRT I complex subunit
Vps23|Schizosaccharomyces pombe|chr 1|||Manual
Length = 487
Score = 26.2 bits (55), Expect = 4.2
Identities = 14/39 (35%), Positives = 17/39 (43%)
Frame = +2
Query: 335 QETDDSGGVKNKRKRMRQRWKIHRSCFTLYTSYQNGSKQ 451
Q D+ GG + Q WK RS F +Y Q KQ
Sbjct: 96 QLLDEKGGKHKYTSLLLQLWKNERSVFNIYRLVQALIKQ 134
>SPCC285.14 |||TRAPP complex subunit Trs130 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1150
Score = 25.0 bits (52), Expect = 9.7
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +1
Query: 142 QGLLNLNSALFNKFVQYSLSL 204
Q LL L S+ FN+FVQ +L +
Sbjct: 338 QALLFLTSSFFNEFVQNNLEI 358
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,514,927
Number of Sequences: 5004
Number of extensions: 49845
Number of successful extensions: 160
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 145
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 156
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 299817502
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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