Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner13f18f
(660 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF016422-4|AAG24172.1| 320|Caenorhabditis elegans Hypothetical ... 84 7e-17
AC084153-4|AAK84598.2| 836|Caenorhabditis elegans Hypothetical ... 73 2e-13
U41533-7|AAA83170.1| 337|Caenorhabditis elegans Small glutamine... 62 4e-10
AL132948-2|CAC51076.2| 496|Caenorhabditis elegans Hypothetical ... 59 2e-09
Z83241-3|CAB05818.1| 422|Caenorhabditis elegans Hypothetical pr... 56 2e-08
Z81120-9|CAB03349.1| 422|Caenorhabditis elegans Hypothetical pr... 56 2e-08
U41007-3|AAA82267.1| 297|Caenorhabditis elegans Hypothetical pr... 52 4e-07
U77412-1|AAB63465.1| 1151|Caenorhabditis elegans O-linked GlcNAc... 48 4e-06
U21320-2|ABC71824.1| 973|Caenorhabditis elegans O-linked glcnac... 48 4e-06
U21320-1|AAA62535.2| 1151|Caenorhabditis elegans O-linked glcnac... 48 4e-06
U29096-3|AAA68407.1| 961|Caenorhabditis elegans Uncoordinated p... 46 2e-05
AF034085-1|AAD01976.1| 961|Caenorhabditis elegans UNC-45 protein. 46 2e-05
U97405-9|AAB53012.2| 266|Caenorhabditis elegans C-term of hsp70... 45 4e-05
AF303269-1|AAG50227.1| 266|Caenorhabditis elegans Hsp70-interac... 45 4e-05
U88181-2|AAB42303.1| 491|Caenorhabditis elegans Dnaj domain (pr... 38 0.006
AF043693-3|AAB97537.1| 207|Caenorhabditis elegans Hypothetical ... 37 0.011
U29488-9|AAA68778.1| 342|Caenorhabditis elegans Hypothetical pr... 36 0.025
Z66512-3|CAA91325.1| 179|Caenorhabditis elegans Hypothetical pr... 35 0.045
AF016427-4|AAB65353.1| 774|Caenorhabditis elegans Hypothetical ... 32 0.31
AC084197-42|AAU87806.2| 544|Caenorhabditis elegans Acetylcholin... 28 5.1
Z81533-10|CAB04329.1| 109|Caenorhabditis elegans Hypothetical p... 27 8.9
>AF016422-4|AAG24172.1| 320|Caenorhabditis elegans Hypothetical
protein R09E12.3 protein.
Length = 320
Score = 84.2 bits (199), Expect = 7e-17
Identities = 42/106 (39%), Positives = 61/106 (57%)
Frame = +3
Query: 342 PTTVEELKIKGNECVKDGKFIEAVLHYTQAIKMDPNNYILHSNRSFAFLKLDQHYLSLQD 521
P +E K KGNE K G + A+ HY +A+K DP N IL+SNR+ KL + +L D
Sbjct: 137 PELAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPENAILYSNRAACLTKLMEFQRALDD 196
Query: 522 ANETVRLQPQWAKGYFRRAEVEAASGLYDEAIISYTHALQLDPQNQ 659
+ +RL ++ KGY R+A A + +A +Y ALQ+DP N+
Sbjct: 197 CDTCIRLDSKFIKGYIRKAACLVAMREWSKAQRAYEDALQVDPSNE 242
Score = 35.1 bits (77), Expect = 0.045
Identities = 18/76 (23%), Positives = 38/76 (50%)
Frame = +3
Query: 372 GNECVKDGKFIEAVLHYTQAIKMDPNNYILHSNRSFAFLKLDQHYLSLQDANETVRLQPQ 551
GN K F +A +HY +AI++DP+N ++N++ + + + +Q + V + +
Sbjct: 12 GNAAYKQKDFEKAHVHYDKAIELDPSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRE 71
Query: 552 WAKGYFRRAEVEAASG 599
Y A+ + +G
Sbjct: 72 TRADYKLIAKAMSRAG 87
>AC084153-4|AAK84598.2| 836|Caenorhabditis elegans Hypothetical
protein Y22D7AL.9 protein.
Length = 836
Score = 72.9 bits (171), Expect = 2e-13
Identities = 36/100 (36%), Positives = 59/100 (59%)
Frame = +3
Query: 351 VEELKIKGNECVKDGKFIEAVLHYTQAIKMDPNNYILHSNRSFAFLKLDQHYLSLQDANE 530
+E++ + DG++ EA Y +A++ P N ILH+N S LK+ +L+ A
Sbjct: 5 LEKVVHEAGSAYSDGRYQEARELYEKALRDHPKNGILHANLSAILLKIQLPPEALKHAEI 64
Query: 531 TVRLQPQWAKGYFRRAEVEAASGLYDEAIISYTHALQLDP 650
+V+L PQWAK Y+R+ E + A G ++I SY + ++LDP
Sbjct: 65 SVKLCPQWAKAYYRQGEAQRALGFLKKSIYSYCNGIRLDP 104
>U41533-7|AAA83170.1| 337|Caenorhabditis elegans Small
glutamine-rich tetratricorepeat protein protein 1
protein.
Length = 337
Score = 61.7 bits (143), Expect = 4e-10
Identities = 31/101 (30%), Positives = 57/101 (56%)
Frame = +3
Query: 357 ELKIKGNECVKDGKFIEAVLHYTQAIKMDPNNYILHSNRSFAFLKLDQHYLSLQDANETV 536
+LK +GN+ +K +F AV Y AIK++ + + NR+ A+ +L+Q+ L++QD +
Sbjct: 107 KLKEEGNDLMKASQFEAAVQKYNAAIKLN-RDPVYFCNRAAAYCRLEQYDLAIQDCRTAL 165
Query: 537 RLQPQWAKGYFRRAEVEAASGLYDEAIISYTHALQLDPQNQ 659
L P ++K + R + Y+ A +Y AL+L+P +
Sbjct: 166 ALDPSYSKAWGRMGLAYSCQNRYEHAAEAYKKALELEPNQE 206
>AL132948-2|CAC51076.2| 496|Caenorhabditis elegans Hypothetical
protein Y39B6A.2 protein.
Length = 496
Score = 59.3 bits (137), Expect = 2e-09
Identities = 29/100 (29%), Positives = 58/100 (58%)
Frame = +3
Query: 360 LKIKGNECVKDGKFIEAVLHYTQAIKMDPNNYILHSNRSFAFLKLDQHYLSLQDANETVR 539
+K + N+ KD + A Y+ AI++ P +L+ NR+ A+LK + + +L+DA+ +
Sbjct: 32 IKDEANQFFKDQVYDVAADLYSVAIEIHPTA-VLYGNRAQAYLKKELYGSALEDADNAIA 90
Query: 540 LQPQWAKGYFRRAEVEAASGLYDEAIISYTHALQLDPQNQ 659
+ P + KG++RRA A G + +A+ Y +++ P ++
Sbjct: 91 IDPSYVKGFYRRATANMALGRFKKALTDYQAVVKVCPNDK 130
>Z83241-3|CAB05818.1| 422|Caenorhabditis elegans Hypothetical
protein T12D8.8 protein.
Length = 422
Score = 56.4 bits (130), Expect = 2e-08
Identities = 33/112 (29%), Positives = 55/112 (49%)
Frame = +3
Query: 312 KNTIMDEAKKPTTVEELKIKGNECVKDGKFIEAVLHYTQAIKMDPNNYILHSNRSFAFLK 491
K DE +K + E + K E +G F A+ H+T AI+ +P + +LH+ R+ LK
Sbjct: 105 KEATEDEIEKAS---EERGKAQEAFSNGDFDTALTHFTAAIEANPGSAMLHAKRANVLLK 161
Query: 492 LDQHYLSLQDANETVRLQPQWAKGYFRRAEVEAASGLYDEAIISYTHALQLD 647
L + ++ D ++ + + P A+GY R G + EA A +LD
Sbjct: 162 LKRPVAAIADCDKAISINPDSAQGYKFRGRANRLLGKWVEAKTDLATACKLD 213
>Z81120-9|CAB03349.1| 422|Caenorhabditis elegans Hypothetical
protein T12D8.8 protein.
Length = 422
Score = 56.4 bits (130), Expect = 2e-08
Identities = 33/112 (29%), Positives = 55/112 (49%)
Frame = +3
Query: 312 KNTIMDEAKKPTTVEELKIKGNECVKDGKFIEAVLHYTQAIKMDPNNYILHSNRSFAFLK 491
K DE +K + E + K E +G F A+ H+T AI+ +P + +LH+ R+ LK
Sbjct: 105 KEATEDEIEKAS---EERGKAQEAFSNGDFDTALTHFTAAIEANPGSAMLHAKRANVLLK 161
Query: 492 LDQHYLSLQDANETVRLQPQWAKGYFRRAEVEAASGLYDEAIISYTHALQLD 647
L + ++ D ++ + + P A+GY R G + EA A +LD
Sbjct: 162 LKRPVAAIADCDKAISINPDSAQGYKFRGRANRLLGKWVEAKTDLATACKLD 213
>U41007-3|AAA82267.1| 297|Caenorhabditis elegans Hypothetical
protein C33H5.8 protein.
Length = 297
Score = 52.0 bits (119), Expect = 4e-07
Identities = 35/97 (36%), Positives = 53/97 (54%)
Frame = +3
Query: 324 MDEAKKPTTVEELKIKGNECVKDGKFIEAVLHYTQAIKMDPNNYILHSNRSFAFLKLDQH 503
MDE KK + LK +GNE K K+ +A+ Y+++++ P+ I+ SNR+ A L D
Sbjct: 1 MDEEKK--IAQRLKEQGNEAFKKKKYHKAMTIYSKSLEHWPDP-IVFSNRAQAGLNADLP 57
Query: 504 YLSLQDANETVRLQPQWAKGYFRRAEVEAASGLYDEA 614
L+ D + L AK Y+RRA+ A LY+ A
Sbjct: 58 LLAQIDCTAALNLDSTAAKAYYRRAQAFKALELYELA 94
>U77412-1|AAB63465.1| 1151|Caenorhabditis elegans O-linked GlcNAc
transferase protein.
Length = 1151
Score = 48.4 bits (110), Expect = 4e-06
Identities = 25/88 (28%), Positives = 45/88 (51%)
Frame = +3
Query: 387 KDGKFIEAVLHYTQAIKMDPNNYILHSNRSFAFLKLDQHYLSLQDANETVRLQPQWAKGY 566
+ GK +A+LHY +AI++ P +SN ++ ++ N +++ P +A +
Sbjct: 477 QQGKLNDAILHYKEAIRIAPTFADAYSNMGNTLKEMGDSSAAIACYNRAIQINPAFADAH 536
Query: 567 FRRAEVEAASGLYDEAIISYTHALQLDP 650
A + +G EAI SY+ AL+L P
Sbjct: 537 SNLASIHKDAGNMAEAIQSYSTALKLKP 564
Score = 36.7 bits (81), Expect = 0.015
Identities = 24/93 (25%), Positives = 40/93 (43%)
Frame = +3
Query: 372 GNECVKDGKFIEAVLHYTQAIKMDPNNYILHSNRSFAFLKLDQHYLSLQDANETVRLQPQ 551
GN + F AV Y +A+ + N+ ++H N + + + L++ + + LQP
Sbjct: 336 GNVLKEARIFDRAVSAYLRALNLSGNHAVVHGNLACVYYEQGLIDLAIDTYKKAIDLQPH 395
Query: 552 WAKGYFRRAEVEAASGLYDEAIISYTHALQLDP 650
+ Y A G EA Y AL+L P
Sbjct: 396 FPDAYCNLANALKEKGSVVEAEQMYMKALELCP 428
Score = 35.9 bits (79), Expect = 0.025
Identities = 22/86 (25%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Frame = +3
Query: 396 KFIEAVLHYTQ-AIKMDPNNYILHSNRSFAFLKLDQHYLSLQDANETVRLQPQWAKGYFR 572
K +E + Y+ AIK++ +SN + + Q +L++ V+L+P++ Y
Sbjct: 173 KNLEKSMQYSMLAIKVNNQCAEAYSNLGNYYKEKGQLQDALENYKLAVKLKPEFIDAYIN 232
Query: 573 RAEVEAASGLYDEAIISYTHALQLDP 650
A + G ++A+ +Y +ALQ++P
Sbjct: 233 LAAALVSGGDLEQAVTAYFNALQINP 258
Score = 30.3 bits (65), Expect = 1.3
Identities = 22/92 (23%), Positives = 43/92 (46%), Gaps = 3/92 (3%)
Frame = +3
Query: 387 KDGKFIEAVLHYTQAIKMDPNN---YILHSNRSFAFLKLDQHYLSLQDANETVRLQPQWA 557
+ G ++EA + + DPNN +L S +F L++ S+Q + +++ Q A
Sbjct: 137 QSGNYVEAEKYCNLVFQSDPNNLPTLLLLSAINFQTKNLEK---SMQYSMLAIKVNNQCA 193
Query: 558 KGYFRRAEVEAASGLYDEAIISYTHALQLDPQ 653
+ Y G +A+ +Y A++L P+
Sbjct: 194 EAYSNLGNYYKEKGQLQDALENYKLAVKLKPE 225
>U21320-2|ABC71824.1| 973|Caenorhabditis elegans O-linked glcnac
transferase protein1, isoform b protein.
Length = 973
Score = 48.4 bits (110), Expect = 4e-06
Identities = 25/88 (28%), Positives = 45/88 (51%)
Frame = +3
Query: 387 KDGKFIEAVLHYTQAIKMDPNNYILHSNRSFAFLKLDQHYLSLQDANETVRLQPQWAKGY 566
+ GK +A+LHY +AI++ P +SN ++ ++ N +++ P +A +
Sbjct: 299 QQGKLNDAILHYKEAIRIAPTFADAYSNMGNTLKEMGDSSAAIACYNRAIQINPAFADAH 358
Query: 567 FRRAEVEAASGLYDEAIISYTHALQLDP 650
A + +G EAI SY+ AL+L P
Sbjct: 359 SNLASIHKDAGNMAEAIQSYSTALKLKP 386
Score = 36.7 bits (81), Expect = 0.015
Identities = 24/93 (25%), Positives = 40/93 (43%)
Frame = +3
Query: 372 GNECVKDGKFIEAVLHYTQAIKMDPNNYILHSNRSFAFLKLDQHYLSLQDANETVRLQPQ 551
GN + F AV Y +A+ + N+ ++H N + + + L++ + + LQP
Sbjct: 158 GNVLKEARIFDRAVSAYLRALNLSGNHAVVHGNLACVYYEQGLIDLAIDTYKKAIDLQPH 217
Query: 552 WAKGYFRRAEVEAASGLYDEAIISYTHALQLDP 650
+ Y A G EA Y AL+L P
Sbjct: 218 FPDAYCNLANALKEKGSVVEAEQMYMKALELCP 250
Score = 33.9 bits (74), Expect = 0.10
Identities = 19/74 (25%), Positives = 39/74 (52%)
Frame = +3
Query: 429 AIKMDPNNYILHSNRSFAFLKLDQHYLSLQDANETVRLQPQWAKGYFRRAEVEAASGLYD 608
AIK++ +SN + + Q +L++ V+L+P++ Y A + G +
Sbjct: 7 AIKVNNQCAEAYSNLGNYYKEKGQLQDALENYKLAVKLKPEFIDAYINLAAALVSGGDLE 66
Query: 609 EAIISYTHALQLDP 650
+A+ +Y +ALQ++P
Sbjct: 67 QAVTAYFNALQINP 80
>U21320-1|AAA62535.2| 1151|Caenorhabditis elegans O-linked glcnac
transferase protein1, isoform a protein.
Length = 1151
Score = 48.4 bits (110), Expect = 4e-06
Identities = 25/88 (28%), Positives = 45/88 (51%)
Frame = +3
Query: 387 KDGKFIEAVLHYTQAIKMDPNNYILHSNRSFAFLKLDQHYLSLQDANETVRLQPQWAKGY 566
+ GK +A+LHY +AI++ P +SN ++ ++ N +++ P +A +
Sbjct: 477 QQGKLNDAILHYKEAIRIAPTFADAYSNMGNTLKEMGDSSAAIACYNRAIQINPAFADAH 536
Query: 567 FRRAEVEAASGLYDEAIISYTHALQLDP 650
A + +G EAI SY+ AL+L P
Sbjct: 537 SNLASIHKDAGNMAEAIQSYSTALKLKP 564
Score = 36.7 bits (81), Expect = 0.015
Identities = 24/93 (25%), Positives = 40/93 (43%)
Frame = +3
Query: 372 GNECVKDGKFIEAVLHYTQAIKMDPNNYILHSNRSFAFLKLDQHYLSLQDANETVRLQPQ 551
GN + F AV Y +A+ + N+ ++H N + + + L++ + + LQP
Sbjct: 336 GNVLKEARIFDRAVSAYLRALNLSGNHAVVHGNLACVYYEQGLIDLAIDTYKKAIDLQPH 395
Query: 552 WAKGYFRRAEVEAASGLYDEAIISYTHALQLDP 650
+ Y A G EA Y AL+L P
Sbjct: 396 FPDAYCNLANALKEKGSVVEAEQMYMKALELCP 428
Score = 35.9 bits (79), Expect = 0.025
Identities = 22/86 (25%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Frame = +3
Query: 396 KFIEAVLHYTQ-AIKMDPNNYILHSNRSFAFLKLDQHYLSLQDANETVRLQPQWAKGYFR 572
K +E + Y+ AIK++ +SN + + Q +L++ V+L+P++ Y
Sbjct: 173 KNLEKSMQYSMLAIKVNNQCAEAYSNLGNYYKEKGQLQDALENYKLAVKLKPEFIDAYIN 232
Query: 573 RAEVEAASGLYDEAIISYTHALQLDP 650
A + G ++A+ +Y +ALQ++P
Sbjct: 233 LAAALVSGGDLEQAVTAYFNALQINP 258
Score = 30.3 bits (65), Expect = 1.3
Identities = 22/92 (23%), Positives = 43/92 (46%), Gaps = 3/92 (3%)
Frame = +3
Query: 387 KDGKFIEAVLHYTQAIKMDPNN---YILHSNRSFAFLKLDQHYLSLQDANETVRLQPQWA 557
+ G ++EA + + DPNN +L S +F L++ S+Q + +++ Q A
Sbjct: 137 QSGNYVEAEKYCNLVFQSDPNNLPTLLLLSAINFQTKNLEK---SMQYSMLAIKVNNQCA 193
Query: 558 KGYFRRAEVEAASGLYDEAIISYTHALQLDPQ 653
+ Y G +A+ +Y A++L P+
Sbjct: 194 EAYSNLGNYYKEKGQLQDALENYKLAVKLKPE 225
>U29096-3|AAA68407.1| 961|Caenorhabditis elegans Uncoordinated
protein 45 protein.
Length = 961
Score = 46.0 bits (104), Expect = 2e-05
Identities = 31/109 (28%), Positives = 51/109 (46%), Gaps = 5/109 (4%)
Frame = +3
Query: 348 TVEELKIKGNECVKDGKFIEAVLHYTQAIKMDPN-----NYILHSNRSFAFLKLDQHYLS 512
T EE++ +GN VKD +I+A YT+A+++ + +L+ NR+ A LK D +
Sbjct: 7 TAEEIRDEGNAAVKDQDYIKADELYTEALQLTTDEDKALRPVLYRNRAMARLKRDDFEGA 66
Query: 513 LQDANETVRLQPQWAKGYFRRAEVEAASGLYDEAIISYTHALQLDPQNQ 659
D + + K FRR+ G A AL+L P ++
Sbjct: 67 QSDCTKALEFDGADVKALFRRSLAREQLGNVGPAFQDAKEALRLSPNDK 115
>AF034085-1|AAD01976.1| 961|Caenorhabditis elegans UNC-45 protein.
Length = 961
Score = 46.0 bits (104), Expect = 2e-05
Identities = 31/109 (28%), Positives = 51/109 (46%), Gaps = 5/109 (4%)
Frame = +3
Query: 348 TVEELKIKGNECVKDGKFIEAVLHYTQAIKMDPN-----NYILHSNRSFAFLKLDQHYLS 512
T EE++ +GN VKD +I+A YT+A+++ + +L+ NR+ A LK D +
Sbjct: 7 TAEEIRDEGNAAVKDQDYIKADELYTEALQLTTDEDKALRPVLYRNRAMARLKRDDFEGA 66
Query: 513 LQDANETVRLQPQWAKGYFRRAEVEAASGLYDEAIISYTHALQLDPQNQ 659
D + + K FRR+ G A AL+L P ++
Sbjct: 67 QSDCTKALEFDGADVKALFRRSLAREQLGNVGPAFQDAKEALRLSPNDK 115
>U97405-9|AAB53012.2| 266|Caenorhabditis elegans C-term of
hsp70-interacting protein(chip family) protein 1
protein.
Length = 266
Score = 45.2 bits (102), Expect = 4e-05
Identities = 26/95 (27%), Positives = 47/95 (49%)
Frame = +3
Query: 354 EELKIKGNECVKDGKFIEAVLHYTQAIKMDPNNYILHSNRSFAFLKLDQHYLSLQDANET 533
E+ G +C + ++ +AV HY++AIK++P + NR+ + +L+ ++ +D
Sbjct: 6 EQHNTNGKKCYMNKRYDDAVDHYSKAIKVNPLPK-YYQNRAMCYFQLNNLKMTEEDCKRA 64
Query: 534 VRLQPQWAKGYFRRAEVEAASGLYDEAIISYTHAL 638
+ L P K + V S Y EAI + AL
Sbjct: 65 LELSPNEVKPLYFLGNVFLQSKKYSEAISCLSKAL 99
>AF303269-1|AAG50227.1| 266|Caenorhabditis elegans
Hsp70-interacting protein protein.
Length = 266
Score = 45.2 bits (102), Expect = 4e-05
Identities = 26/95 (27%), Positives = 47/95 (49%)
Frame = +3
Query: 354 EELKIKGNECVKDGKFIEAVLHYTQAIKMDPNNYILHSNRSFAFLKLDQHYLSLQDANET 533
E+ G +C + ++ +AV HY++AIK++P + NR+ + +L+ ++ +D
Sbjct: 6 EQHNTNGKKCYMNKRYDDAVDHYSKAIKVNPLPK-YYQNRAMCYFQLNNLKMTEEDCKRA 64
Query: 534 VRLQPQWAKGYFRRAEVEAASGLYDEAIISYTHAL 638
+ L P K + V S Y EAI + AL
Sbjct: 65 LELSPNEVKPLYFLGNVFLQSKKYSEAISCLSKAL 99
>U88181-2|AAB42303.1| 491|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 7 protein.
Length = 491
Score = 37.9 bits (84), Expect = 0.006
Identities = 20/95 (21%), Positives = 42/95 (44%)
Frame = +3
Query: 372 GNECVKDGKFIEAVLHYTQAIKMDPNNYILHSNRSFAFLKLDQHYLSLQDANETVRLQPQ 551
G++ + +F +A+ Y AI++DP +Y R+ +L + + ++ D + L+P
Sbjct: 33 GSQFLARAQFADALTQYHAAIELDPKSYQAIYRRATTYLAMGRGKAAIVDLERVLELKPD 92
Query: 552 WAKGYFRRAEVEAASGLYDEAIISYTHALQLDPQN 656
+ +R + G + A + L D N
Sbjct: 93 FYGARIQRGNILLKQGELEAAEADFNIVLNHDSSN 127
>AF043693-3|AAB97537.1| 207|Caenorhabditis elegans Hypothetical
protein C34B2.5 protein.
Length = 207
Score = 37.1 bits (82), Expect = 0.011
Identities = 32/124 (25%), Positives = 58/124 (46%), Gaps = 6/124 (4%)
Frame = +3
Query: 306 LLKNTIMDEAKKPTTVEELKIKGNECVKDGKFIEAVLHYTQAIKMDPN-----NYILHSN 470
+++ DE + T V+ LK +GN +G+F +A Y +AI P IL SN
Sbjct: 3 IIEEIFEDEEDQITKVDSLKKEGNNFFANGEFEKANEKYQEAIASCPPTSTEVQSILLSN 62
Query: 471 RSFAFLKLDQHYLSLQDANETVRLQPQWAKGYFRRA-EVEAASGLYDEAIISYTHALQLD 647
+ A +KL + +++ A++++ + K RRA S Y+ +I Y +
Sbjct: 63 SAAALIKLRKWESAVEAASKSIEIGATNEKALERRAFAYSNMSEKYENSIEDYKQLQESL 122
Query: 648 PQNQ 659
P+ +
Sbjct: 123 PKRR 126
>U29488-9|AAA68778.1| 342|Caenorhabditis elegans Hypothetical
protein C56C10.10 protein.
Length = 342
Score = 35.9 bits (79), Expect = 0.025
Identities = 30/115 (26%), Positives = 52/115 (45%), Gaps = 18/115 (15%)
Frame = +3
Query: 324 MDEAKKPTTVEELKIKGNECVKDGKFIEAVLHYTQA------------------IKMDPN 449
+DE K +VE L+ KGNE + EA+ Y A +++D
Sbjct: 182 LDEDDKLKSVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRK 241
Query: 450 NYILHSNRSFAFLKLDQHYLSLQDANETVRLQPQWAKGYFRRAEVEAASGLYDEA 614
N L++N S +L + + + + ++E ++ + K FRRA+ A+ DEA
Sbjct: 242 NIPLYANMSQCYLNIGDLHEAEETSSEVLKREETNEKALFRRAKARIAAWKLDEA 296
>Z66512-3|CAA91325.1| 179|Caenorhabditis elegans Hypothetical
protein F52H3.5 protein.
Length = 179
Score = 35.1 bits (77), Expect = 0.045
Identities = 25/100 (25%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Frame = +3
Query: 357 ELKIKGNECVKDGKFIEAVLHYTQAIKMDPNNYILHSNRSFAFLKLDQHYLSLQDANETV 536
+L+ +G + + EA+ +T+A+++ P N ++NR+ A+ ++ +L D NE +
Sbjct: 45 QLEREGVALAEGVRLDEAIEKFTKALEVCPKNPSAYNNRAQAYRLQNKPEKALDDLNEAL 104
Query: 537 RLQPQWAK----GYFRRAEVEAASGLYDEAIISYTHALQL 644
L K Y +RA + G D+A + A +L
Sbjct: 105 SLAGPKTKTACQAYVQRASIYRLRGDDDKARTDFASAAEL 144
>AF016427-4|AAB65353.1| 774|Caenorhabditis elegans Hypothetical
protein F32D1.3 protein.
Length = 774
Score = 32.3 bits (70), Expect = 0.31
Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Frame = +3
Query: 342 PTTVEELKIKGNECVKDGKFIEAVLHYTQAIKMDPNNYILHSNRSFAFLKLDQHY-LSLQ 518
PT ++ L+ N + +E+ Y + ++ PN+Y H+N A L L+Q Y L+L+
Sbjct: 684 PTHLDSLQGIANLLQQTQNHVESETFYRKVMEAQPNSYAAHANYG-AILHLNQKYDLALK 742
Query: 519 DANETVRLQP 548
+ + L P
Sbjct: 743 EYEIALILDP 752
>AC084197-42|AAU87806.2| 544|Caenorhabditis elegans Acetylcholine
receptor protein 25 protein.
Length = 544
Score = 28.3 bits (60), Expect = 5.1
Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 5/59 (8%)
Frame = +2
Query: 302 LLVKKYHHG*SQETDDSGGVKNKRKRMRQRWK-----IHRSCFTLYTSYQNGSKQLYFA 463
LLV + HG E + + K K++ WK + R C ++TS+ GS FA
Sbjct: 477 LLVLQQVHGHLSEINKHIREREKSKKIEDDWKFSALVVDRICMVIFTSFLFGSTVALFA 535
>Z81533-10|CAB04329.1| 109|Caenorhabditis elegans Hypothetical
protein F36G9.15 protein.
Length = 109
Score = 27.5 bits (58), Expect = 8.9
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -1
Query: 138 VLISWYFQGIVILFGVYLSLFTVIIS 61
++ S YFQ I +LFG +L L I++
Sbjct: 2 LMFSIYFQSITLLFGPFLLLIVFIVN 27
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,639,939
Number of Sequences: 27780
Number of extensions: 270740
Number of successful extensions: 741
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 700
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 738
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1476380920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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