Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner13f16f
(648 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal protein... 31 0.14
SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces pombe... 29 0.44
SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3 |Schizosacchar... 28 1.0
SPCC1450.11c |cek1||serine/threonine protein kinase Cek1|Schizos... 27 1.8
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 27 2.3
SPAC25G10.03 |zip1||transcription factor Zip1|Schizosaccharomyce... 27 3.1
SPAC1705.03c ||SPAC23H4.19|conserved fungal family|Schizosacchar... 26 4.1
SPAC27D7.11c |||But2 family protein|Schizosaccharomyces pombe|ch... 26 5.4
SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 26 5.4
SPAC2E1P3.02c |amt3||ammonium transporter Amt3|Schizosaccharomyc... 26 5.4
SPBC28E12.06c |lvs1|SPBC3H7.16|beige protein homolog|Schizosacch... 26 5.4
SPAC343.11c |msc1||multi-copy suppressor of Chk1 |Schizosaccharo... 26 5.4
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 25 7.1
SPAC19B12.01 ||SPAC4F10.21|TPR repeat protein, TTC27 family|Schi... 25 7.1
SPBC21D10.06c |map4||cell agglutination protein Map4|Schizosacch... 25 7.1
SPBC36.11 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||M... 25 7.1
SPAC27F1.08 |pdt1||Nramp family manganese ion transporter|Schizo... 25 7.1
SPBC1289.10c |||transcription factor |Schizosaccharomyces pombe|... 25 9.4
SPAC13G6.10c |||O-glucosyl hydrolase |Schizosaccharomyces pombe|... 25 9.4
>SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 670
Score = 31.1 bits (67), Expect = 0.14
Identities = 28/89 (31%), Positives = 37/89 (41%)
Frame = -3
Query: 625 PTRGPSSYHVLGSGGPHLGARTMTAIAPASMHSQATQNNTNSDQRKFTQKGSSAYFSTSS 446
PT PSS S T+TA S T T + T SS Y+S SS
Sbjct: 464 PTSAPSSVSSFTSSNSSY-TTTLTA-------SNTTVTFTGTGTGSATATSSSPYYSNSS 515
Query: 445 LVIPVNCRLLASSSIFASPFLWSPTTYFA 359
+++P S S F+S SPT+ F+
Sbjct: 516 IIVPTTVSTSGSVSSFSSS--PSPTSSFS 542
>SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 317
Score = 29.5 bits (63), Expect = 0.44
Identities = 15/58 (25%), Positives = 31/58 (53%)
Frame = -3
Query: 622 TRGPSSYHVLGSGGPHLGARTMTAIAPASMHSQATQNNTNSDQRKFTQKGSSAYFSTS 449
TR SSY + S + + ++ +P+S S+++ ++ +S + K SS+ S+S
Sbjct: 139 TRTSSSYFITSSSSTPSSSSSSSSSSPSSSSSKSSSSSKSSSSSSSSSKSSSSSSSSS 196
Score = 25.4 bits (53), Expect = 7.1
Identities = 21/77 (27%), Positives = 37/77 (48%)
Frame = -3
Query: 574 LGARTMTAIAPASMHSQATQNNTNSDQRKFTQKGSSAYFSTSSLVIPVNCRLLASSSIFA 395
L A + I+ +S+ T ++T+ + SS+YF TSS P + +SSS +
Sbjct: 108 LQACSTCTISTSSLSYSGTISSTSIAPSMIGTRTSSSYFITSSSSTPSSSSSSSSSSPSS 167
Query: 394 SPFLWSPTTYFASDMST 344
S S ++ +S S+
Sbjct: 168 SSSKSSSSSKSSSSSSS 184
>SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1131
Score = 28.3 bits (60), Expect = 1.0
Identities = 33/111 (29%), Positives = 53/111 (47%), Gaps = 11/111 (9%)
Frame = -3
Query: 643 ASTKSSPTRGPSSYHVLGSGGPHLGARTM-TAIAPAS--------MHSQATQNNTNSDQR 491
+S SSPT SS S G G T+ T+I+ +S + S ++QN+ + Q
Sbjct: 718 SSILSSPTSMQSSVSRPQSSGDASGFNTIFTSISQSSDGETSGYTISSNSSQNSASEPQT 777
Query: 490 KFTQKGSSA--YFSTSSLVIPVNCRLLASSSIFASPFLWSPTTYFASDMST 344
FT SSA + SS+ V+ + +SS ++SP + T S +S+
Sbjct: 778 AFTSSSSSATPTITQSSISTSVSSQSSMNSS-YSSPISSNSVTSSTSIISS 827
>SPCC1450.11c |cek1||serine/threonine protein kinase
Cek1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1338
Score = 27.5 bits (58), Expect = 1.8
Identities = 17/36 (47%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = -2
Query: 260 EVRFGRPEFCIRFWYSLVGCNVF-ILFHLPSINRET 156
EV G P W+SL GC VF LF P N ET
Sbjct: 867 EVILGNPGIKASDWWSL-GCVVFEFLFGYPPFNAET 901
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 27.1 bits (57), Expect = 2.3
Identities = 28/107 (26%), Positives = 50/107 (46%), Gaps = 5/107 (4%)
Frame = -3
Query: 640 STKSSPTRGPSSYHVLGSG--GPHLGARTMTAIAPASMHSQATQNNTNSDQRKFTQKG-- 473
S+ S P+ S +L S P + ++++ + +S S A+ ++ +S +
Sbjct: 565 SSSSIPSTFSSVSSILSSSTSSPSSTSLSISSSSTSSTFSSASTSSPSSISSSISSSSTI 624
Query: 472 -SSAYFSTSSLVIPVNCRLLASSSIFASPFLWSPTTYFASDMSTRVM 335
SS STSSL+I + + SSSI +S P + S S+ V+
Sbjct: 625 LSSPTPSTSSLMISSSSIISGSSSILSSSISTIPISSSLSTYSSSVI 671
>SPAC25G10.03 |zip1||transcription factor Zip1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 330
Score = 26.6 bits (56), Expect = 3.1
Identities = 16/67 (23%), Positives = 28/67 (41%)
Frame = -3
Query: 643 ASTKSSPTRGPSSYHVLGSGGPHLGARTMTAIAPASMHSQATQNNTNSDQRKFTQKGSSA 464
++T S+P ++ L + + HS+ TQ T+S + F QK S A
Sbjct: 95 SNTFSAPLNATGNFSSANPASIDLAYLDLQKLLTLPDHSKETQEKTSSQRELFEQKSSVA 154
Query: 463 YFSTSSL 443
S ++
Sbjct: 155 SASKDNV 161
>SPAC1705.03c ||SPAC23H4.19|conserved fungal
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 421
Score = 26.2 bits (55), Expect = 4.1
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = -3
Query: 265 LPRFVLDDRNSVSDSGIAL*VATCSSSFTCPPSIERRFFRGSD 137
L F D +SD AL V T +++FTCP S + +G D
Sbjct: 298 LGNFSSIDMPDLSDVKGALTVETKATNFTCPWSNDDSVIKGDD 340
>SPAC27D7.11c |||But2 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 463
Score = 25.8 bits (54), Expect = 5.4
Identities = 13/53 (24%), Positives = 22/53 (41%)
Frame = -3
Query: 595 LGSGGPHLGARTMTAIAPASMHSQATQNNTNSDQRKFTQKGSSAYFSTSSLVI 437
+G+G P + A+ P + S +T N+T S T ST + +
Sbjct: 150 VGNGNPSCVGIAVLAVLPQPISSSSTYNSTTSSYHNSTSTPPPTITSTKASTV 202
>SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 536
Score = 25.8 bits (54), Expect = 5.4
Identities = 24/97 (24%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
Frame = -3
Query: 631 SSPTRGPSSYHVLGSGGPHLGARTMTAIAPASMHSQATQNNTNSDQRKFTQKGSSAYFST 452
SS P+S + S ++ ++ A + S AT +++S + + S+
Sbjct: 68 SSSFTSPASSSFITSLVSSSSQQSSSSSASLTSSSSATLTSSSSASPTSSSSSHALSSSS 127
Query: 451 SSLVIPVNCRLLASSSI-FASPFLWSPTTYFASDMST 344
SSLV + ++SSS+ +S S ++Y +S M+T
Sbjct: 128 SSLVASSSSSGMSSSSLSHSSSVPSSSSSYHSSSMTT 164
>SPAC2E1P3.02c |amt3||ammonium transporter Amt3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 517
Score = 25.8 bits (54), Expect = 5.4
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +3
Query: 507 VLFWVAWLCMLAGAIAVI 560
VL W AWLC +G + +
Sbjct: 278 VLIWFAWLCFNSGTLLTV 295
>SPBC28E12.06c |lvs1|SPBC3H7.16|beige protein
homolog|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2609
Score = 25.8 bits (54), Expect = 5.4
Identities = 15/62 (24%), Positives = 29/62 (46%)
Frame = -3
Query: 583 GPHLGARTMTAIAPASMHSQATQNNTNSDQRKFTQKGSSAYFSTSSLVIPVNCRLLASSS 404
GP +G+R + + + + T + + +QK S +Y + SL +P LL ++
Sbjct: 523 GPSIGSRNQSTPSTLAPNVAETDALVSENTGAASQKTSKSYKTNDSLKVPPLVPLLIGTT 582
Query: 403 IF 398
F
Sbjct: 583 RF 584
>SPAC343.11c |msc1||multi-copy suppressor of Chk1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1588
Score = 25.8 bits (54), Expect = 5.4
Identities = 15/29 (51%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = -1
Query: 138 TSLIVYYT-LKTSFSLRESSPFTINHDLQ 55
TS YYT L T FSL ES PF +Q
Sbjct: 607 TSPNTYYTVLDTGFSLSESVPFATKEWIQ 635
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 25.4 bits (53), Expect = 7.1
Identities = 26/101 (25%), Positives = 48/101 (47%), Gaps = 1/101 (0%)
Frame = -3
Query: 643 ASTKSSPTRGPSSYHVLGSGGPHLGAR-TMTAIAPASMHSQATQNNTNSDQRKFTQKGSS 467
A T +S + SS V S P + T+T+ + ++ +T ++++S + SS
Sbjct: 201 APTSTSSSYLSSSSVVSSSSSPSSSSSSTLTSSSLSTSSIPSTSSSSSSTSSSLSSSSSS 260
Query: 466 AYFSTSSLVIPVNCRLLASSSIFASPFLWSPTTYFASDMST 344
+ S+SS + + +SSS +SP S T +S S+
Sbjct: 261 STASSSSSSSSI---ISSSSSSSSSPTSTSSTISSSSSSSS 298
>SPAC19B12.01 ||SPAC4F10.21|TPR repeat protein, TTC27
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 817
Score = 25.4 bits (53), Expect = 7.1
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +3
Query: 417 NKRQFTGMTREEVLKYADDPFWVNLRWSLFVL 512
N G+TREE+ YA+ + WS++ +
Sbjct: 318 NNNPDDGLTREEMAPYAERVLVYPVNWSVYTM 349
>SPBC21D10.06c |map4||cell agglutination protein
Map4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 948
Score = 25.4 bits (53), Expect = 7.1
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = -1
Query: 171 HQSRDGFSVAPTSLIVYYTLKTSFSLRESSPFTIN 67
H S + P+S + TL +S +SS FT++
Sbjct: 475 HSSASSLPITPSSYLSNTTLHSSVQSSQSSQFTVS 509
>SPBC36.11 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 343
Score = 25.4 bits (53), Expect = 7.1
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = -2
Query: 632 VQSDQGTEFVPCPGFGRAALGC-AYNDCNSPGEHAQPGHPE 513
VQS QG P PG ++ YND NS G H+ E
Sbjct: 247 VQSVQGRPLAPIPGRRPLSISSDLYNDSNS-GSHSNDDSDE 286
>SPAC27F1.08 |pdt1||Nramp family manganese ion
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 521
Score = 25.4 bits (53), Expect = 7.1
Identities = 12/47 (25%), Positives = 23/47 (48%)
Frame = +3
Query: 423 RQFTGMTREEVLKYADDPFWVNLRWSLFVLFWVAWLCMLAGAIAVIV 563
R + T EE + + +L W++ ++ W WL + A + +IV
Sbjct: 467 RVVSDSTNEETGQLIRETHDYSLGWTMTIVTWAIWLFLTALNLLLIV 513
>SPBC1289.10c |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 743
Score = 25.0 bits (52), Expect = 9.4
Identities = 12/45 (26%), Positives = 22/45 (48%)
Frame = -3
Query: 568 ARTMTAIAPASMHSQATQNNTNSDQRKFTQKGSSAYFSTSSLVIP 434
A+ ++P ++ + NN +SD+ G+ FS+SS P
Sbjct: 82 AKRHKRMSPVAVKHEGISNNESSDENMNVNNGNLDSFSSSSAPPP 126
>SPAC13G6.10c |||O-glucosyl hydrolase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 530
Score = 25.0 bits (52), Expect = 9.4
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = -3
Query: 544 PASMHSQATQNNTNSDQRKFTQKGSSAYF-STSSLVIPVNCRLLASSSIFASPFLWSPTT 368
PAS A+ + +S + + SS STSS V PV+ + +SS I A S T+
Sbjct: 162 PASSTEVASSYSASSTEVTSSYPASSEVATSTSSYVAPVSSSVASSSEISAG----SATS 217
Query: 367 YFASDMST 344
Y + S+
Sbjct: 218 YVPTSSSS 225
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,850,350
Number of Sequences: 5004
Number of extensions: 60806
Number of successful extensions: 212
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 200
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 209
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 291768710
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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