Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner13e15f
(687 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF099002-2|AAC68740.2| 556|Caenorhabditis elegans Hypothetical ... 164 6e-41
AF099002-1|AAK68587.1| 559|Caenorhabditis elegans Hypothetical ... 163 1e-40
AF099002-3|AAO91691.1| 570|Caenorhabditis elegans Hypothetical ... 74 9e-28
AF003132-1|AAB54133.3| 798|Caenorhabditis elegans Hypothetical ... 32 0.33
U23528-2|AAK31387.1| 984|Caenorhabditis elegans Calsyntenin/alc... 31 0.77
AY091591-1|AAM00045.1| 984|Caenorhabditis elegans calsyntenin p... 31 0.77
AL132863-4|CAB60575.1| 410|Caenorhabditis elegans Hypothetical ... 30 1.8
AF100659-8|AAC68966.1| 688|Caenorhabditis elegans Hypothetical ... 29 3.1
Z82073-3|CAB04926.1| 631|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z82270-1|CAB63203.1| 914|Caenorhabditis elegans Hypothetical pr... 28 7.2
AF077542-2|AAC26294.1| 244|Caenorhabditis elegans Hypothetical ... 28 7.2
Z47073-2|CAA87373.1| 507|Caenorhabditis elegans Hypothetical pr... 27 9.5
AL021489-2|CAA16370.1| 333|Caenorhabditis elegans Hypothetical ... 27 9.5
AF390558-1|AAK72007.1| 308|Caenorhabditis elegans ced-3 proteas... 27 9.5
AF003740-4|AAL08030.1| 308|Caenorhabditis elegans Ced-3 proteas... 27 9.5
>AF099002-2|AAC68740.2| 556|Caenorhabditis elegans Hypothetical
protein Y71H10B.1a protein.
Length = 556
Score = 164 bits (398), Expect = 6e-41
Identities = 72/127 (56%), Positives = 92/127 (72%)
Frame = +2
Query: 305 AWFDKRVLEHRIFVNRSLHLENVKFYGFDMDYTLAEYKSPQYETLGFNLTKERLVVKGYP 484
+W D + R+FVNRSL LE + +GFDMDYTL +YK+P E L FN+ +RLV GYP
Sbjct: 3 SWKDSNA-DERVFVNRSLRLEKITHFGFDMDYTLVQYKAPDMEYLAFNMAVQRLVDTGYP 61
Query: 485 REILEFEYDPSFPVRGLWFDTLYGNLLKVDAYGNILVCVHGFEFLKHSQVYELYPNKFLT 664
EI F+YDP FPVRGLWF+ +GNLLKVD +GNIL +HG FLK+ ++ E+YPNK+L
Sbjct: 62 EEIKSFKYDPIFPVRGLWFEFQFGNLLKVDGFGNILGGIHGLRFLKNHEIEEMYPNKYLP 121
Query: 665 LDESRGY 685
L +SR Y
Sbjct: 122 LSDSRVY 128
>AF099002-1|AAK68587.1| 559|Caenorhabditis elegans Hypothetical
protein Y71H10B.1b protein.
Length = 559
Score = 163 bits (395), Expect = 1e-40
Identities = 72/123 (58%), Positives = 90/123 (73%)
Frame = +2
Query: 317 KRVLEHRIFVNRSLHLENVKFYGFDMDYTLAEYKSPQYETLGFNLTKERLVVKGYPREIL 496
KR R+FVNRSL LE + +GFDMDYTL +YK+P E L FN+ +RLV GYP EI
Sbjct: 9 KRNPAERVFVNRSLRLEKITHFGFDMDYTLVQYKAPDMEYLAFNMAVQRLVDTGYPEEIK 68
Query: 497 EFEYDPSFPVRGLWFDTLYGNLLKVDAYGNILVCVHGFEFLKHSQVYELYPNKFLTLDES 676
F+YDP FPVRGLWF+ +GNLLKVD +GNIL +HG FLK+ ++ E+YPNK+L L +S
Sbjct: 69 SFKYDPIFPVRGLWFEFQFGNLLKVDGFGNILGGIHGLRFLKNHEIEEMYPNKYLPLSDS 128
Query: 677 RGY 685
R Y
Sbjct: 129 RVY 131
>AF099002-3|AAO91691.1| 570|Caenorhabditis elegans Hypothetical
protein Y71H10B.1c protein.
Length = 570
Score = 73.7 bits (173), Expect(2) = 9e-28
Identities = 31/57 (54%), Positives = 42/57 (73%)
Frame = +2
Query: 515 SFPVRGLWFDTLYGNLLKVDAYGNILVCVHGFEFLKHSQVYELYPNKFLTLDESRGY 685
+F GLWF+ +GNLLKVD +GNIL +HG FLK+ ++ E+YPNK+L L +SR Y
Sbjct: 86 NFLYLGLWFEFQFGNLLKVDGFGNILGGIHGLRFLKNHEIEEMYPNKYLPLSDSRVY 142
Score = 67.7 bits (158), Expect(2) = 9e-28
Identities = 29/47 (61%), Positives = 34/47 (72%)
Frame = +2
Query: 392 MDYTLAEYKSPQYETLGFNLTKERLVVKGYPREILEFEYDPSFPVRG 532
MDYTL +YK+P E L FN+ +RLV GYP EI F+YDP FPVRG
Sbjct: 1 MDYTLVQYKAPDMEYLAFNMAVQRLVDTGYPEEIKSFKYDPIFPVRG 47
>AF003132-1|AAB54133.3| 798|Caenorhabditis elegans Hypothetical
protein F37E3.1 protein.
Length = 798
Score = 32.3 bits (70), Expect = 0.33
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = +2
Query: 449 LTKERLVVKGYPREILEF-EYDPSFPVRGLWFDTLYGNLLKVD--AYGNILVCVHGFEFL 619
+ K + K RE+L F E +PS P+ L F+T++G +L++ Y I C E L
Sbjct: 325 IEKNQFNRKACARELLAFAEENPSVPIGFLIFETIFGQMLRLPHAPYPAIFHCSLVLELL 384
Query: 620 K 622
K
Sbjct: 385 K 385
>U23528-2|AAK31387.1| 984|Caenorhabditis elegans Calsyntenin/alcadein
homolog protein1, isoform a protein.
Length = 984
Score = 31.1 bits (67), Expect = 0.77
Identities = 32/138 (23%), Positives = 64/138 (46%), Gaps = 2/138 (1%)
Frame = +2
Query: 206 DKSVAGIDKPLSRVDRSELELDSFAESLTTMHSAWFDKRVLEHRIFVNRSLHLENVKFYG 385
++S G + LS+V +S+A+ + T+ A RVL +++FV ++ ++ V
Sbjct: 714 EESAQGYKEVLSKVHYFNTRPESYAKRVYTVQCAMLKGRVLSNQLFV--TMTIDGVT--- 768
Query: 386 FDMDYTLAEYKSP-QYETLGFNLTKERLVVKGYPREILEFEYDPSFPVRGLWFDTLYGNL 562
T E +P Q + + FN + E++E ++P+F G + N+
Sbjct: 769 -TTTSTTTEAPAPAQPDPIQFNFNSGETALDSL--ELIERHFEPAFDQLG---SSRLQNI 822
Query: 563 LKVD-AYGNILVCVHGFE 613
L++D L+ HG++
Sbjct: 823 LEMDLPRPKALLSHHGYD 840
>AY091591-1|AAM00045.1| 984|Caenorhabditis elegans calsyntenin
protein.
Length = 984
Score = 31.1 bits (67), Expect = 0.77
Identities = 32/138 (23%), Positives = 64/138 (46%), Gaps = 2/138 (1%)
Frame = +2
Query: 206 DKSVAGIDKPLSRVDRSELELDSFAESLTTMHSAWFDKRVLEHRIFVNRSLHLENVKFYG 385
++S G + LS+V +S+A+ + T+ A RVL +++FV ++ ++ V
Sbjct: 714 EESAQGYKEVLSKVHYFNTRPESYAKRVYTVQCAMLKGRVLSNQLFV--TMTIDGVT--- 768
Query: 386 FDMDYTLAEYKSP-QYETLGFNLTKERLVVKGYPREILEFEYDPSFPVRGLWFDTLYGNL 562
T E +P Q + + FN + E++E ++P+F G + N+
Sbjct: 769 -TTTSTTTEAPAPAQPDPIQFNFNSGETALDSL--ELIERHFEPAFDQLG---SSRLQNI 822
Query: 563 LKVD-AYGNILVCVHGFE 613
L++D L+ HG++
Sbjct: 823 LEMDLPRPKALLSHHGYD 840
>AL132863-4|CAB60575.1| 410|Caenorhabditis elegans Hypothetical
protein Y37H2A.6 protein.
Length = 410
Score = 29.9 bits (64), Expect = 1.8
Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Frame = +2
Query: 194 LEIPDKSVAGIDKPLSRVDRSELELDSFAE-SLTTMHSAWFDKRVLEHRIFVNRSLHLEN 370
+E D + +++ LS V+ LE F + S +S FD + + + LH+ N
Sbjct: 229 IETSDLTFPEVERILSHVEPGRLETIHFIDPSFDNSNSELFDAFIQSEHVRKAKELHITN 288
Query: 371 VKFYGF 388
+ Y F
Sbjct: 289 IVAYSF 294
>AF100659-8|AAC68966.1| 688|Caenorhabditis elegans Hypothetical
protein F58E2.3 protein.
Length = 688
Score = 29.1 bits (62), Expect = 3.1
Identities = 20/94 (21%), Positives = 40/94 (42%)
Frame = +2
Query: 224 IDKPLSRVDRSELELDSFAESLTTMHSAWFDKRVLEHRIFVNRSLHLENVKFYGFDMDYT 403
+D +S++D EL+ A S + WF + + HR + + + F G+
Sbjct: 91 LDLEISQLDYEELDKRMSASSQSIQFYDWFIQFLNNHRTGGLKPKLISLLGFTGYQALSI 150
Query: 404 LAEYKSPQYETLGFNLTKERLVVKGYPREILEFE 505
S E + N KE ++ + +EI++ +
Sbjct: 151 FRHISSNHLEIINLNFRKEDTEIEEHFQEIVKMK 184
>Z82073-3|CAB04926.1| 631|Caenorhabditis elegans Hypothetical
protein W06D12.5 protein.
Length = 631
Score = 28.3 bits (60), Expect = 5.4
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +2
Query: 545 TLYGNLLKVDAYGNILVCVHGFEFL 619
T YG++ G +LVCV+GF F+
Sbjct: 330 TGYGSIAPESTLGQVLVCVYGFIFV 354
>Z82270-1|CAB63203.1| 914|Caenorhabditis elegans Hypothetical
protein F53H2.1 protein.
Length = 914
Score = 27.9 bits (59), Expect = 7.2
Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Frame = +2
Query: 230 KPLSRVDRSELELDSFAESLT-TMHSAWFDKRVLEHRIFVNRSLHLENVKFYGFDMDYTL 406
K +R+DR + ELDS + T T A +R E N S H +N + YGF +
Sbjct: 472 KDKNRIDRYQSELDSSKQQSTPTATIAVNIRRNSEQSQVENHSGHFQN-EDYGFSL---- 526
Query: 407 AEYKSPQYETL 439
P+Y+TL
Sbjct: 527 --VSEPRYDTL 535
>AF077542-2|AAC26294.1| 244|Caenorhabditis elegans Hypothetical
protein Y57G7A.5 protein.
Length = 244
Score = 27.9 bits (59), Expect = 7.2
Identities = 11/33 (33%), Positives = 23/33 (69%)
Frame = +2
Query: 206 DKSVAGIDKPLSRVDRSELELDSFAESLTTMHS 304
+K VA D+ L+++DR+E+EL +++ ++ S
Sbjct: 113 EKEVAKQDEFLNQIDRNEMELKDLRDNIRSLRS 145
>Z47073-2|CAA87373.1| 507|Caenorhabditis elegans Hypothetical
protein ZC506.3 protein.
Length = 507
Score = 27.5 bits (58), Expect = 9.5
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = -3
Query: 430 VLWRFVFGQCIVHIKTVKFNIF 365
V WR VFG +V++ ++F +F
Sbjct: 152 VFWRIVFGVSVVYLMLLQFTLF 173
>AL021489-2|CAA16370.1| 333|Caenorhabditis elegans Hypothetical
protein Y44A6C.2 protein.
Length = 333
Score = 27.5 bits (58), Expect = 9.5
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +2
Query: 287 LTTMHSAWFDKRVLEHRIFVNRSLHLENVKFYGFDMDYTLAEYKS 421
L+ HS W LE N+ ++L+ FY DM+ L E KS
Sbjct: 162 LSVTHSDWMVPSDLEE--MENKIVYLDKSDFYDSDMNQFLRELKS 204
>AF390558-1|AAK72007.1| 308|Caenorhabditis elegans ced-3 protease
suppressor 6 protein.
Length = 308
Score = 27.5 bits (58), Expect = 9.5
Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Frame = +2
Query: 395 DYTLA-EYKSPQYETLGFNLTKERLV-VKGYPREILEFEYDPSFPVRGLWFDTLY 553
D+ L+ +YK+ + +LT ERL +G R++ EF+ D +FP + L +T Y
Sbjct: 85 DFVLSYDYKTRTAHWVCEHLTPERLKHAEGVDRKLCEFKPDITFPQKFLSQNTDY 139
>AF003740-4|AAL08030.1| 308|Caenorhabditis elegans Ced-3 protease
suppressor protein 6 protein.
Length = 308
Score = 27.5 bits (58), Expect = 9.5
Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Frame = +2
Query: 395 DYTLA-EYKSPQYETLGFNLTKERLV-VKGYPREILEFEYDPSFPVRGLWFDTLY 553
D+ L+ +YK+ + +LT ERL +G R++ EF+ D +FP + L +T Y
Sbjct: 85 DFVLSYDYKTRTAHWVCEHLTPERLKHAEGVDRKLCEFKPDITFPQKFLSQNTDY 139
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,940,587
Number of Sequences: 27780
Number of extensions: 312391
Number of successful extensions: 869
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 820
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 869
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1571291122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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