Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner13e15f
         (687 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    24   1.2  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          24   1.6  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      24   1.6  
DQ325133-1|ABD14147.1|  181|Apis mellifera complementary sex det...    23   2.7  
DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.               22   6.3  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    22   6.3  
AB238796-1|BAE93398.1|  128|Apis mellifera Queen brain-selective...    22   6.3  
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                22   6.3  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    21   8.3  

>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 18/64 (28%), Positives = 28/64 (43%)
 Frame = +2

Query: 380 YGFDMDYTLAEYKSPQYETLGFNLTKERLVVKGYPREILEFEYDPSFPVRGLWFDTLYGN 559
           Y FD+DY  +E + P         T +  +  G     +    DP+  V G+W + L  N
Sbjct: 549 YLFDLDYNESEEQCPY--------TVDAAIY-GNISHFINHSCDPNLAVYGVWINCLDPN 599

Query: 560 LLKV 571
           L K+
Sbjct: 600 LPKL 603


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +2

Query: 611 EFLKHSQVYELYPNKF 658
           +++K   +YE+YPN F
Sbjct: 155 KYMKFPAIYEIYPNYF 170


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +2

Query: 611 EFLKHSQVYELYPNKF 658
           +++K   +YE+YPN F
Sbjct: 155 KYMKFPAIYEIYPNYF 170


>DQ325133-1|ABD14147.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 5/54 (9%)
 Frame = -1

Query: 564 SKFPYNVSNQRPLTGN---EGSYSNSNISLGYPLTTNLSLVKL--NPNVSYCGD 418
           SK P  +SN  PL+ N     +Y+N N      L  N++ ++    P   YCG+
Sbjct: 76  SKEPKIISNNNPLSNNYNYNNNYNNYNKHNYNKLYYNINYIEQIPIPVPVYCGN 129


>DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.
          Length = 160

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -1

Query: 378 NLTFSKCNDLLTKILCSSTLLSN 310
           N +  KC + L  I+C S LLS+
Sbjct: 122 NKSTDKCENGLNFIICFSKLLSD 144


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 14/63 (22%), Positives = 28/63 (44%)
 Frame = +2

Query: 101 PSVSPQDIRARANXXXXXXRPVIKFFAGDETLEIPDKSVAGIDKPLSRVDRSELELDSFA 280
           P + P+ IR   +      RP+      D  +E P+K++  +   L++  +  L    FA
Sbjct: 638 PPLPPKRIRKMPSMPLLP-RPISCHTTPDSFIEAPNKTLPSLPSTLTKNSKQGLFSKLFA 696

Query: 281 ESL 289
           + +
Sbjct: 697 KKV 699


>AB238796-1|BAE93398.1|  128|Apis mellifera Queen brain-selective
           protein-1 protein.
          Length = 128

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -1

Query: 648 GYNSYTCECFKNSNPC 601
           G ++   EC K SNPC
Sbjct: 92  GCSAEKFECSKTSNPC 107


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 8/28 (28%), Positives = 16/28 (57%)
 Frame = +2

Query: 560 LLKVDAYGNILVCVHGFEFLKHSQVYEL 643
           +++ + Y N+L       FLKHS + ++
Sbjct: 95  IIQTEKYSNMLNSEKHASFLKHSNIVKV 122


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 10/37 (27%), Positives = 16/37 (43%)
 Frame = +2

Query: 413 YKSPQYETLGFNLTKERLVVKGYPREILEFEYDPSFP 523
           Y +PQ + L     +++    GY   +    YDP  P
Sbjct: 110 YGNPQQQQLAAETQQQQQHNNGYASPMSTSSYDPYSP 146


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,437
Number of Sequences: 438
Number of extensions: 4158
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20952180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)