Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner13e12f
         (632 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR628411-1|CAM12829.1|  520|Homo sapiens cyclin L2 protein.            41   0.004
AL834441-1|CAD39101.1|  213|Homo sapiens hypothetical protein pr...    41   0.004
AL391244-5|CAI22659.1|  226|Homo sapiens cyclin L2 protein.            41   0.004
AL391244-4|CAI22660.2|  520|Homo sapiens cyclin L2 protein.            41   0.004
AK074112-1|BAB84938.1|  227|Homo sapiens FLJ00183 protein protein.     41   0.004
BC016333-1|AAH16333.1|  226|Homo sapiens cyclin L2 protein.            40   0.006
BC067812-1|AAH67812.1|  526|Homo sapiens cyclin L1 protein.            34   0.36 
BC038394-1|AAH38394.1|  172|Homo sapiens CCNL1 protein protein.        34   0.36 
BC007081-1|AAH07081.1|  526|Homo sapiens cyclin L1 protein.            34   0.36 
AY034790-1|AAK61551.1|  172|Homo sapiens cyclin L gamma protein.       34   0.36 
AF367477-1|AAM21205.1|  172|Homo sapiens cyclin L gamma protein.       34   0.36 
AF367476-1|AAM21204.1|  232|Homo sapiens cyclin L beta protein.        34   0.36 
AF180920-1|AAD53184.1|  526|Homo sapiens cyclin L ania-6a protein.     34   0.36 

>CR628411-1|CAM12829.1|  520|Homo sapiens cyclin L2 protein.
          Length = 520

 Score = 40.7 bits (91), Expect = 0.004
 Identities = 16/36 (44%), Positives = 24/36 (66%)
 Frame = +3

Query: 525 KTYGKIVLTLYNCLLPESVFKETPSQADSLDIETET 632
           + Y  +++TL NCLLP+   + TPS +  LD +TET
Sbjct: 40  RLYSGVLITLENCLLPDDKLRFTPSMSSGLDTDTET 75


>AL834441-1|CAD39101.1|  213|Homo sapiens hypothetical protein
           protein.
          Length = 213

 Score = 40.7 bits (91), Expect = 0.004
 Identities = 16/36 (44%), Positives = 24/36 (66%)
 Frame = +3

Query: 525 KTYGKIVLTLYNCLLPESVFKETPSQADSLDIETET 632
           + Y  +++TL NCLLP+   + TPS +  LD +TET
Sbjct: 27  RLYSGVLITLENCLLPDDKLRFTPSMSSGLDTDTET 62


>AL391244-5|CAI22659.1|  226|Homo sapiens cyclin L2 protein.
          Length = 226

 Score = 40.7 bits (91), Expect = 0.004
 Identities = 16/36 (44%), Positives = 24/36 (66%)
 Frame = +3

Query: 525 KTYGKIVLTLYNCLLPESVFKETPSQADSLDIETET 632
           + Y  +++TL NCLLP+   + TPS +  LD +TET
Sbjct: 40  RLYSGVLITLENCLLPDDKLRFTPSMSSGLDTDTET 75


>AL391244-4|CAI22660.2|  520|Homo sapiens cyclin L2 protein.
          Length = 520

 Score = 40.7 bits (91), Expect = 0.004
 Identities = 16/36 (44%), Positives = 24/36 (66%)
 Frame = +3

Query: 525 KTYGKIVLTLYNCLLPESVFKETPSQADSLDIETET 632
           + Y  +++TL NCLLP+   + TPS +  LD +TET
Sbjct: 40  RLYSGVLITLENCLLPDDKLRFTPSMSSGLDTDTET 75


>AK074112-1|BAB84938.1|  227|Homo sapiens FLJ00183 protein protein.
          Length = 227

 Score = 40.7 bits (91), Expect = 0.004
 Identities = 16/36 (44%), Positives = 24/36 (66%)
 Frame = +3

Query: 525 KTYGKIVLTLYNCLLPESVFKETPSQADSLDIETET 632
           + Y  +++TL NCLLP+   + TPS +  LD +TET
Sbjct: 41  RLYSGVLITLENCLLPDDKLRFTPSMSSGLDTDTET 76


>BC016333-1|AAH16333.1|  226|Homo sapiens cyclin L2 protein.
          Length = 226

 Score = 40.3 bits (90), Expect = 0.006
 Identities = 16/36 (44%), Positives = 24/36 (66%)
 Frame = +3

Query: 525 KTYGKIVLTLYNCLLPESVFKETPSQADSLDIETET 632
           + Y  +++TL NCLLP+   + TPS +  LD +TET
Sbjct: 40  RLYSGVLITLENCLLPDDKLRFTPSMSSGLDSDTET 75


>BC067812-1|AAH67812.1|  526|Homo sapiens cyclin L1 protein.
          Length = 526

 Score = 34.3 bits (75), Expect = 0.36
 Identities = 14/36 (38%), Positives = 22/36 (61%)
 Frame = +3

Query: 525 KTYGKIVLTLYNCLLPESVFKETPSQADSLDIETET 632
           + Y ++ LT+ + L+PE     TPS  D LD+ +ET
Sbjct: 45  RLYSEVSLTIDHSLIPEERLSPTPSMQDGLDLPSET 80


>BC038394-1|AAH38394.1|  172|Homo sapiens CCNL1 protein protein.
          Length = 172

 Score = 34.3 bits (75), Expect = 0.36
 Identities = 14/36 (38%), Positives = 22/36 (61%)
 Frame = +3

Query: 525 KTYGKIVLTLYNCLLPESVFKETPSQADSLDIETET 632
           + Y ++ LT+ + L+PE     TPS  D LD+ +ET
Sbjct: 45  RLYSEVSLTIDHSLIPEERLSPTPSMQDGLDLPSET 80


>BC007081-1|AAH07081.1|  526|Homo sapiens cyclin L1 protein.
          Length = 526

 Score = 34.3 bits (75), Expect = 0.36
 Identities = 14/36 (38%), Positives = 22/36 (61%)
 Frame = +3

Query: 525 KTYGKIVLTLYNCLLPESVFKETPSQADSLDIETET 632
           + Y ++ LT+ + L+PE     TPS  D LD+ +ET
Sbjct: 45  RLYSEVSLTIDHSLIPEERLSPTPSMQDGLDLPSET 80


>AY034790-1|AAK61551.1|  172|Homo sapiens cyclin L gamma protein.
          Length = 172

 Score = 34.3 bits (75), Expect = 0.36
 Identities = 14/36 (38%), Positives = 22/36 (61%)
 Frame = +3

Query: 525 KTYGKIVLTLYNCLLPESVFKETPSQADSLDIETET 632
           + Y ++ LT+ + L+PE     TPS  D LD+ +ET
Sbjct: 45  RLYSEVSLTIDHSLIPEERLSPTPSMQDGLDLPSET 80


>AF367477-1|AAM21205.1|  172|Homo sapiens cyclin L gamma protein.
          Length = 172

 Score = 34.3 bits (75), Expect = 0.36
 Identities = 14/36 (38%), Positives = 22/36 (61%)
 Frame = +3

Query: 525 KTYGKIVLTLYNCLLPESVFKETPSQADSLDIETET 632
           + Y ++ LT+ + L+PE     TPS  D LD+ +ET
Sbjct: 45  RLYSEVSLTIDHSLIPEERLSPTPSMQDGLDLPSET 80


>AF367476-1|AAM21204.1|  232|Homo sapiens cyclin L beta protein.
          Length = 232

 Score = 34.3 bits (75), Expect = 0.36
 Identities = 14/36 (38%), Positives = 22/36 (61%)
 Frame = +3

Query: 525 KTYGKIVLTLYNCLLPESVFKETPSQADSLDIETET 632
           + Y ++ LT+ + L+PE     TPS  D LD+ +ET
Sbjct: 45  RLYSEVSLTIDHSLIPEERLSPTPSMQDGLDLPSET 80


>AF180920-1|AAD53184.1|  526|Homo sapiens cyclin L ania-6a protein.
          Length = 526

 Score = 34.3 bits (75), Expect = 0.36
 Identities = 14/36 (38%), Positives = 22/36 (61%)
 Frame = +3

Query: 525 KTYGKIVLTLYNCLLPESVFKETPSQADSLDIETET 632
           + Y ++ LT+ + L+PE     TPS  D LD+ +ET
Sbjct: 45  RLYSEVSLTIDHSLIPEERLSPTPSMQDGLDLPSET 80


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,598,603
Number of Sequences: 237096
Number of extensions: 1660909
Number of successful extensions: 3080
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2974
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3080
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6916500330
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)