Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner13e09r
         (723 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060477-1|AAL25516.1|  313|Drosophila melanogaster SD07295p pro...    30   2.8  
BT023002-1|AAY55418.1|  145|Drosophila melanogaster IP08468p pro...    29   6.4  
AY069512-1|AAL39657.1|  857|Drosophila melanogaster LD23217p pro...    29   6.4  
AE014298-1231|AAS65293.1| 1006|Drosophila melanogaster CG12075-P...    29   6.4  
AE014298-1230|AAF46414.3| 1006|Drosophila melanogaster CG12075-P...    29   6.4  
AE014297-2551|AAF55572.1|  145|Drosophila melanogaster CG7695-PA...    29   6.4  

>AY060477-1|AAL25516.1|  313|Drosophila melanogaster SD07295p
           protein.
          Length = 313

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 29/117 (24%), Positives = 48/117 (41%)
 Frame = -3

Query: 430 KRVWATYNIHTDRIIYVWNWPDRSRQLFYIDHLEEI*KRLCTQPEPISHASEKERAIGAG 251
           +R+W  Y++ T       N   RSR L  ++ L+    R  T+     H +EKER +   
Sbjct: 19  RRIWTKYSLVTPSSRSYINESQRSRYLGALNELDHWLNR--TRQAEQMHLAEKERLL--S 74

Query: 250 RLTERERAHNXXXXXXXXXXXXXSEPVGYPNEKERAIGAGRLRELERARNRSRSVTR 80
            L   +R  N                   P+E+ R +    L+++ RA+  + S TR
Sbjct: 75  ELERMQREDNEKIERLEEIFRRTLLRDSQPSERLRFVTETALKQM-RAKRDALSATR 130


>BT023002-1|AAY55418.1|  145|Drosophila melanogaster IP08468p
           protein.
          Length = 145

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 5/34 (14%)
 Frame = +2

Query: 377 PNVYDPVCVNIISSPYPFTFRNK-----YICMTQ 463
           P++YDPVC  I    Y  TF N+     YIC  +
Sbjct: 96  PDIYDPVCAQIFQEEY-LTFSNECEMRNYICTNE 128


>AY069512-1|AAL39657.1|  857|Drosophila melanogaster LD23217p
           protein.
          Length = 857

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 25/82 (30%), Positives = 34/82 (41%)
 Frame = -3

Query: 304 QPEPISHASEKERAIGAGRLTERERAHNXXXXXXXXXXXXXSEPVGYPNEKERAIGAGRL 125
           QP P     E+ER +   R  ERER  +                +    E+ER     R 
Sbjct: 275 QPRPSERELERERELERNRERERERERD--------RDRERERELERNRERERERDRERD 326

Query: 124 RELERARNRSRSVTRARKSAQS 59
           R+ ER R+R R+ T A  S +S
Sbjct: 327 RDRERERDRERTKTPASISNKS 348


>AE014298-1231|AAS65293.1| 1006|Drosophila melanogaster CG12075-PB,
           isoform B protein.
          Length = 1006

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 25/82 (30%), Positives = 34/82 (41%)
 Frame = -3

Query: 304 QPEPISHASEKERAIGAGRLTERERAHNXXXXXXXXXXXXXSEPVGYPNEKERAIGAGRL 125
           QP P     E+ER +   R  ERER  +                +    E+ER     R 
Sbjct: 424 QPRPSERELERERELERNRERERERERD--------RDRERERELERNRERERERDRERD 475

Query: 124 RELERARNRSRSVTRARKSAQS 59
           R+ ER R+R R+ T A  S +S
Sbjct: 476 RDRERERDRERTKTPASISNKS 497


>AE014298-1230|AAF46414.3| 1006|Drosophila melanogaster CG12075-PA,
           isoform A protein.
          Length = 1006

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 25/82 (30%), Positives = 34/82 (41%)
 Frame = -3

Query: 304 QPEPISHASEKERAIGAGRLTERERAHNXXXXXXXXXXXXXSEPVGYPNEKERAIGAGRL 125
           QP P     E+ER +   R  ERER  +                +    E+ER     R 
Sbjct: 424 QPRPSERELERERELERNRERERERERD--------RDRERERELERNRERERERDRERD 475

Query: 124 RELERARNRSRSVTRARKSAQS 59
           R+ ER R+R R+ T A  S +S
Sbjct: 476 RDRERERDRERTKTPASISNKS 497


>AE014297-2551|AAF55572.1|  145|Drosophila melanogaster CG7695-PA
           protein.
          Length = 145

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 5/34 (14%)
 Frame = +2

Query: 377 PNVYDPVCVNIISSPYPFTFRNK-----YICMTQ 463
           P++YDPVC  I    Y  TF N+     YIC  +
Sbjct: 96  PDIYDPVCAQIFQEEY-LTFSNECEMRNYICTNE 128


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,039,472
Number of Sequences: 53049
Number of extensions: 468889
Number of successful extensions: 1222
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1102
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1212
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3231892257
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)