Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner13e05f
(566 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_04_0223 - 19192411-19192951,19193363-19193388 32 0.37
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 25 0.63
12_01_1068 - 11052769-11052943,11053103-11053182,11053304-110534... 31 0.64
08_02_0610 + 19307537-19308011,19308187-19310846 31 0.64
07_03_0721 - 20931241-20931669 31 0.85
11_01_0421 + 3236798-3237144,3237356-3237441,3237741-3237895,323... 30 1.1
11_01_0242 - 1862106-1862210,1862302-1862320,1863082-1863257,186... 30 1.1
02_05_1145 + 34429060-34429401,34430053-34430967 30 1.1
01_06_0868 - 32587618-32587875,32588239-32588318,32588518-325885... 30 1.1
04_04_1699 + 35462160-35462555,35463114-35463196,35463317-354633... 30 1.5
04_03_0584 + 17546945-17547382 29 2.0
02_01_0760 - 5639315-5639685,5640072-5640360 29 2.0
02_01_0721 - 5373449-5373603,5373912-5373981,5374473-5374620,537... 29 2.0
01_01_0569 - 4214513-4214669,4215082-4216031,4216488-4216547 29 2.0
12_02_0281 + 16744690-16744727,16744744-16745611,16746195-167467... 29 2.6
11_06_0061 - 19702893-19703869,19703960-19704098,19704166-197042... 29 2.6
08_02_0384 + 16552194-16552621,16552909-16553173,16553239-16553337 29 2.6
01_07_0252 - 42296138-42296281,42296527-42296613,42297043-422971... 29 2.6
10_06_0161 + 11344712-11344877,11345870-11346084 28 4.5
08_02_0186 + 13965960-13966424 28 4.5
07_03_1784 - 29492511-29492804,29492913-29492999,29493076-294932... 28 4.5
06_03_0809 + 24814590-24816593 28 4.5
03_05_0158 + 21348534-21348851 28 4.5
08_02_0088 - 12224160-12224173,12224185-12224593,12224657-12226099 28 6.0
03_05_0491 - 24868261-24869383,24869482-24869561,24870193-248702... 28 6.0
10_05_0043 + 8503979-8504407,8506484-8506624,8506865-8506975,850... 27 7.9
07_03_0137 + 14101849-14102511 27 7.9
06_03_0479 - 21289903-21290124,21290207-21290342,21290435-212904... 27 7.9
03_05_0057 + 20350971-20351405 27 7.9
02_05_1008 - 33461225-33462334 27 7.9
02_02_0118 + 6975362-6975532,6975828-6975917 27 7.9
>05_04_0223 - 19192411-19192951,19193363-19193388
Length = 188
Score = 31.9 bits (69), Expect = 0.37
Identities = 27/80 (33%), Positives = 33/80 (41%), Gaps = 4/80 (5%)
Frame = -2
Query: 367 SASLPYVGGAALRDGGHAP-PRLLVARRGAGDAAPT---ASRRPNEVGRWKSQDIGVRHR 200
+ L + G R GG A P VA AG A PT A+ P+ W ++ G R
Sbjct: 100 AGQLRELDGVQYRGGGAAEQPDRKVAMAPAGSARPTGWNAAAAPSSSASWTARWQGRRPA 159
Query: 199 SRRRVPQGPVW*HLTASRAG 140
R R P W ASR G
Sbjct: 160 PRARRGGTPRWRRQVASRDG 179
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 25.4 bits (53), Expect(2) = 0.63
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Frame = +2
Query: 119 SDTAHVWSSSGGSEV--SPYGPLWDAPPAPVPYP 214
S A +S+GG +V +P P PPAP P P
Sbjct: 258 SAAAAAVASAGGGQVPAAPPPPAGPPPPAPPPLP 291
Score = 24.2 bits (50), Expect(2) = 0.63
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +2
Query: 188 APPAPVPYPDILAFPPADLVWSAAGCG 268
APP P +P A PP SAAG G
Sbjct: 320 APPPPPAHPAAPAPPPPAPSPSAAGAG 346
>12_01_1068 -
11052769-11052943,11053103-11053182,11053304-11053401,
11053487-11053627,11053701-11053841,11053933-11054017,
11055296-11055826,11055926-11055940
Length = 421
Score = 31.1 bits (67), Expect = 0.64
Identities = 21/52 (40%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Frame = +2
Query: 146 SGGSEVSPYGP--LWDAPPAPVPYPDILAFPPADLVWSAAGCGRSVARATPS 295
SGG PY P LWD PP PY A AD S++ R A A P+
Sbjct: 63 SGGGATDPYQPPQLWDPPPPSSPYS---AGHAADEYSSSSSYRRRGASAPPA 111
>08_02_0610 + 19307537-19308011,19308187-19310846
Length = 1044
Score = 31.1 bits (67), Expect = 0.64
Identities = 15/40 (37%), Positives = 18/40 (45%)
Frame = -1
Query: 236 PVEKPGYRGKAPEPAARPTGARMVTPHCLPSWTTREPCRC 117
P+ P R AP AAR A + P+ TT PC C
Sbjct: 919 PLRAPQARAAAPACAARGAAAAATSGRTGPTTTTANPCTC 958
>07_03_0721 - 20931241-20931669
Length = 142
Score = 30.7 bits (66), Expect = 0.85
Identities = 19/50 (38%), Positives = 26/50 (52%)
Frame = -2
Query: 334 LRDGGHAPPRLLVARRGAGDAAPTASRRPNEVGRWKSQDIGVRHRSRRRV 185
L DGG+APP + AR G A+ RP G+ ++ G R R RR+
Sbjct: 81 LDDGGNAPP-AVTARNGGQAMGEEAATRP---GKATARPAGARSRRERRL 126
>11_01_0421 +
3236798-3237144,3237356-3237441,3237741-3237895,
3237971-3238035,3238180-3238363,3238785-3239048,
3239141-3239224,3239727-3239984,3240214-3240472,
3240550-3240755,3240896-3240946,3241041-3241337
Length = 751
Score = 30.3 bits (65), Expect = 1.1
Identities = 16/32 (50%), Positives = 18/32 (56%)
Frame = -2
Query: 346 GGAALRDGGHAPPRLLVARRGAGDAAPTASRR 251
GGAA R G LV R G G+A+P A RR
Sbjct: 55 GGAAGRGGRWPISPALVERSGVGEASPAAGRR 86
>11_01_0242 -
1862106-1862210,1862302-1862320,1863082-1863257,
1863359-1863405,1864443-1865022
Length = 308
Score = 30.3 bits (65), Expect = 1.1
Identities = 17/44 (38%), Positives = 21/44 (47%)
Frame = -2
Query: 367 SASLPYVGGAALRDGGHAPPRLLVARRGAGDAAPTASRRPNEVG 236
S+S PY GG G APP G G AP +++RP G
Sbjct: 50 SSSAPYYGGGG---GYGAPPSTQPYGSGGGYGAPPSTQRPQSYG 90
>02_05_1145 + 34429060-34429401,34430053-34430967
Length = 418
Score = 30.3 bits (65), Expect = 1.1
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +2
Query: 116 GSDTAHVWSSSGGSE-VSPYGPLWDAPPAPVPYPDILAFP 232
GS ++ S+S SE S G W AP +P P P +L P
Sbjct: 195 GSSSSSSSSASSSSESFSGSGRAWSAPVSPRPEPPVLVIP 234
>01_06_0868 -
32587618-32587875,32588239-32588318,32588518-32588583,
32589896-32590523
Length = 343
Score = 30.3 bits (65), Expect = 1.1
Identities = 13/44 (29%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
Frame = +2
Query: 140 SSSGGSEVSPYGPLWDAPPAPV-PYPDILAFPPADLVWSAAGCG 268
+S+ P+G W PP P P D+ FP + + CG
Sbjct: 86 ASASPRRAQPWGRTWARPPGPTWPRSDLGGFPSSGCACAQGACG 129
>04_04_1699 +
35462160-35462555,35463114-35463196,35463317-35463378,
35463745-35463806,35463932-35463991,35464079-35464111,
35464196-35464261,35464349-35464393
Length = 268
Score = 29.9 bits (64), Expect = 1.5
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = -1
Query: 263 SQPPTKRGRPVEKPGYRGKAPEPAARP 183
+QPP KRG P P R + P ARP
Sbjct: 50 AQPPRKRGHPPPPPPRRTRTRGPPARP 76
>04_03_0584 + 17546945-17547382
Length = 145
Score = 29.5 bits (63), Expect = 2.0
Identities = 19/55 (34%), Positives = 26/55 (47%)
Frame = -2
Query: 349 VGGAALRDGGHAPPRLLVARRGAGDAAPTASRRPNEVGRWKSQDIGVRHRSRRRV 185
V L DGG+APP + AR G A+ P G+ ++ G R R RR+
Sbjct: 79 VAATPLDDGGNAPP-AVTARNGGQVGGEEAAATP---GKATARPAGARSRRERRL 129
>02_01_0760 - 5639315-5639685,5640072-5640360
Length = 219
Score = 29.5 bits (63), Expect = 2.0
Identities = 25/63 (39%), Positives = 31/63 (49%)
Frame = -2
Query: 370 HSASLPYVGGAALRDGGHAPPRLLVARRGAGDAAPTASRRPNEVGRWKSQDIGVRHRSRR 191
H+AS P V AA G R L + GA AA T P + G S+++ V RSRR
Sbjct: 23 HAAS-P-VAAAAANSHGPLNFRALFSSAGADAAATTGGCAPAK-GDGHSREVAVVDRSRR 79
Query: 190 RVP 182
R P
Sbjct: 80 RWP 82
>02_01_0721 -
5373449-5373603,5373912-5373981,5374473-5374620,
5374755-5374870,5374955-5375033,5375163-5375233,
5376201-5376344,5376439-5376592,5376906-5376941,
5377145-5377226,5377315-5377408,5377993-5378062,
5378177-5378274,5378745-5378827,5379335-5379428,
5379533-5380036
Length = 665
Score = 29.5 bits (63), Expect = 2.0
Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = +2
Query: 176 PLWDAPPAPVPYPDIL--AFPPADLVWSAAGCGRSVARATP 292
P DA PAP P P +L A P A + + G R VAR+ P
Sbjct: 17 PCADAAPAPAPAPTLLSAALPFARIGRAIDGVVRHVARSLP 57
>01_01_0569 - 4214513-4214669,4215082-4216031,4216488-4216547
Length = 388
Score = 29.5 bits (63), Expect = 2.0
Identities = 20/36 (55%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
Frame = -2
Query: 346 GGAALRDGGHAPPRLLV---ARRGAGDAAPTASRRP 248
GGAAL A PRL V A+RGAGD ASR P
Sbjct: 59 GGAAL----FAVPRLFVGLAAKRGAGDGGEPASRSP 90
>12_02_0281 +
16744690-16744727,16744744-16745611,16746195-16746725,
16747737-16748549
Length = 749
Score = 29.1 bits (62), Expect = 2.6
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +3
Query: 405 GRYRRLHTKNVSLASRP*GWRLRT*ASCVSSCTGRRNL 518
G++RRLH+K + R + RT ASC RR+L
Sbjct: 641 GQFRRLHSKQLQQTFRFYSQQWRTWASCFIQAAWRRHL 678
>11_06_0061 -
19702893-19703869,19703960-19704098,19704166-19704287,
19704362-19704416,19704508-19704624,19704718-19705413,
19706358-19706393,19707190-19708236
Length = 1062
Score = 29.1 bits (62), Expect = 2.6
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
Frame = +2
Query: 113 YGSDTAHVWSSSGGSEVSPYGP--LWDAPPAPVPYPD--ILAFPPADLV 247
Y + AH+ S GG V + P + PP P P+ D + A P D+V
Sbjct: 91 YAASYAHLVSDDGGVLVEHFAPSHIRPRPPPPPPHSDDHLRALSPHDIV 139
>08_02_0384 + 16552194-16552621,16552909-16553173,16553239-16553337
Length = 263
Score = 29.1 bits (62), Expect = 2.6
Identities = 17/40 (42%), Positives = 20/40 (50%)
Frame = -2
Query: 307 RLLVARRGAGDAAPTASRRPNEVGRWKSQDIGVRHRSRRR 188
+LL R AG AAP+ SR P S +R R RRR
Sbjct: 9 KLLATRCAAGAAAPSPSRSPAPSYAGASPGYRLRRRRRRR 48
>01_07_0252 -
42296138-42296281,42296527-42296613,42297043-42297135,
42297267-42297341,42297480-42297575,42297987-42298133,
42298225-42298296,42298912-42298959,42299507-42299607,
42300226-42300337,42300506-42300590,42300693-42300848,
42300956-42301047,42301155-42301238,42301676-42301726,
42302227-42302295,42302417-42302476,42303305-42303535
Length = 600
Score = 29.1 bits (62), Expect = 2.6
Identities = 19/61 (31%), Positives = 27/61 (44%)
Frame = -2
Query: 322 GHAPPRLLVARRGAGDAAPTASRRPNEVGRWKSQDIGVRHRSRRRVPQGPVW*HLTASRA 143
GH+P R G GD S P+ R++ + + +RHR R P G H + S
Sbjct: 2 GHSPSRHNACGGGGGDGESPPSPLPSRFERFRRR-LRLRHRDRAGRPGGDA--HASESGT 58
Query: 142 G 140
G
Sbjct: 59 G 59
>10_06_0161 + 11344712-11344877,11345870-11346084
Length = 126
Score = 28.3 bits (60), Expect = 4.5
Identities = 10/21 (47%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
Frame = +2
Query: 125 TAHVWSS-SGGSEVSPYGPLW 184
T H+W+ SGGS++ +GP W
Sbjct: 89 TVHMWADDSGGSDLFGFGPAW 109
>08_02_0186 + 13965960-13966424
Length = 154
Score = 28.3 bits (60), Expect = 4.5
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = +2
Query: 149 GGSEVSPYGPLWDAPPAP-VP-YPDILAFPPADLVWSAAG 262
GG + +P P + APPA VP Y + A PP L +A G
Sbjct: 99 GGGQYTPQQPYYYAPPAGYVPYYNNSAASPPVLLAHAAVG 138
Score = 27.5 bits (58), Expect = 7.9
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = -1
Query: 260 QPPTKRGRPVEKPGYRGKAPEPAARPTGARMVTPHCLPS 144
QPP G+P+ GY +P P ++P G TP C P+
Sbjct: 55 QPPP--GQPLPIYGY--PSPPPPSQPAGPSSHTPPCPPA 89
>07_03_1784 -
29492511-29492804,29492913-29492999,29493076-29493222,
29493522-29493690,29493777-29494015,29494111-29494356,
29494419-29495084
Length = 615
Score = 28.3 bits (60), Expect = 4.5
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = -3
Query: 171 YGDTSLPPELDHT*AVSLPYDISGK*ILIL*HTPPNEYTTASTVDA*PAREE 16
+GD P+ DH P D+ G+ ++L PP EY A +A +E+
Sbjct: 228 FGDILYYPDKDHLKEFPSPQDLKGR--VLLSTKPPREYLQAKDGNAATIKED 277
>06_03_0809 + 24814590-24816593
Length = 667
Score = 28.3 bits (60), Expect = 4.5
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 191 PPAPVPYPDILAFPPADLVWSAAGCGR 271
PP+P P P + A PP + S +G GR
Sbjct: 253 PPSPAPAPAVSAPPPPAVPSSESGSGR 279
>03_05_0158 + 21348534-21348851
Length = 105
Score = 28.3 bits (60), Expect = 4.5
Identities = 18/48 (37%), Positives = 20/48 (41%), Gaps = 6/48 (12%)
Frame = -2
Query: 355 PYVGGAALRDGGHAPPRL------LVARRGAGDAAPTASRRPNEVGRW 230
P GG R +PP L +VA A A PT SR E G W
Sbjct: 54 PSCGGGRQRGAPDSPPDLRVVAADVVAAAEADGATPTGSRGEEEAGAW 101
>08_02_0088 - 12224160-12224173,12224185-12224593,12224657-12226099
Length = 621
Score = 27.9 bits (59), Expect = 6.0
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -3
Query: 291 GVARATLRPQPAADQTRSAGGKAR 220
GV+RAT + +PA+D+ + AG +R
Sbjct: 137 GVSRATRKGRPASDKKKEAGAPSR 160
>03_05_0491 -
24868261-24869383,24869482-24869561,24870193-24870249,
24870567-24870660,24871013-24871099,24871188-24871347,
24871440-24871674
Length = 611
Score = 27.9 bits (59), Expect = 6.0
Identities = 16/48 (33%), Positives = 20/48 (41%), Gaps = 4/48 (8%)
Frame = -2
Query: 298 VARRGAGDAAPTASR----RPNEVGRWKSQDIGVRHRSRRRVPQGPVW 167
VA GAG AP R E RW ++ H +VP+ P W
Sbjct: 88 VAHSGAGAGAPLRCRDGTVETEEERRWLREEQEALHAGSLKVPRRPPW 135
>10_05_0043 +
8503979-8504407,8506484-8506624,8506865-8506975,
8507746-8508330
Length = 421
Score = 27.5 bits (58), Expect = 7.9
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +2
Query: 107 MSYGSDTAHVWSSSGGSEVSPYGPLWDAPPAPVPYPDILAFPPA 238
M YG+ +H ++ P+ P + P A PYP A+ PA
Sbjct: 1 MDYGAAASHAAAAGPPPAADPHHPHYPHPYAGYPYP-YAAYNPA 43
>07_03_0137 + 14101849-14102511
Length = 220
Score = 27.5 bits (58), Expect = 7.9
Identities = 19/55 (34%), Positives = 26/55 (47%)
Frame = -2
Query: 349 VGGAALRDGGHAPPRLLVARRGAGDAAPTASRRPNEVGRWKSQDIGVRHRSRRRV 185
V AL DGG+APP ++ AR G A+ E ++ G R R RR+
Sbjct: 146 VAATALDDGGNAPP-VVTARNGGQAGGEEAAATLEEA---TARPDGARARRERRL 196
>06_03_0479 -
21289903-21290124,21290207-21290342,21290435-21290490,
21290734-21290811,21290902-21290988,21291067-21291127,
21291220-21291308,21291448-21291545,21291655-21291754,
21293968-21294030
Length = 329
Score = 27.5 bits (58), Expect = 7.9
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = +2
Query: 86 IKIHFPLMSYGSDTAHVWSSSGGSEVSPYGPLWDAPPAPVPYPDI 220
+ + +S+G H+ ++ G V+ YG PA V YPDI
Sbjct: 9 VSVDVERISFGGKEHHIQTNHGSVSVAVYGD--HDKPALVTYPDI 51
>03_05_0057 + 20350971-20351405
Length = 144
Score = 27.5 bits (58), Expect = 7.9
Identities = 13/27 (48%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = -1
Query: 260 QPPTKRGRPVEKPGYRGKAPE-PAARP 183
QPP RP E P +R AP+ P+A P
Sbjct: 29 QPPQAAARPDEAPHHRQPAPDRPSAAP 55
>02_05_1008 - 33461225-33462334
Length = 369
Score = 27.5 bits (58), Expect = 7.9
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +2
Query: 86 IKIHFPLMSYGSDTAHVWSSSGGSEVSPYGPLWDAPPAPVPYPDI 220
+ + P S S T+ SSS G +P + APPAP P ++
Sbjct: 49 LPLPLPPSSAPSSTSSSGSSSLGGVPTPPNSVGSAPPAPPPLSEL 93
>02_02_0118 + 6975362-6975532,6975828-6975917
Length = 86
Score = 27.5 bits (58), Expect = 7.9
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = -2
Query: 427 VCKRRYLPTQFVEGLVQVEHS 365
VC+ +LP QF+EG++ V +
Sbjct: 63 VCRTIWLPQQFIEGMIHVSQT 83
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,362,794
Number of Sequences: 37544
Number of extensions: 462803
Number of successful extensions: 2052
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1883
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2048
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1305140760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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