Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner13d22f
         (610 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058550-1|AAL13779.1|  560|Drosophila melanogaster LD24704p pro...    35   0.075
AL034388-1|CAB65861.1|  469|Drosophila melanogaster EG:67A9.2 pr...    35   0.075
AE014298-331|AAF45722.1|  560|Drosophila melanogaster CG16903-PA...    35   0.075
AE014134-1839|AAF52914.1|  553|Drosophila melanogaster CG5375-PA...    30   2.1  

>AY058550-1|AAL13779.1|  560|Drosophila melanogaster LD24704p
           protein.
          Length = 560

 Score = 35.1 bits (77), Expect = 0.075
 Identities = 17/44 (38%), Positives = 23/44 (52%)
 Frame = +1

Query: 196 KERRRTDSNTPWRRSPNSNSP*KTNTMTPARGRNDRNTLTAPTR 327
           + R RT S TP  RSP S SP +  T    R R+ R+   +P +
Sbjct: 398 RSRTRTHSRTPRSRSPRSRSPSRERTKKTHRSRSSRSRSRSPPK 441


>AL034388-1|CAB65861.1|  469|Drosophila melanogaster EG:67A9.2
           protein.
          Length = 469

 Score = 35.1 bits (77), Expect = 0.075
 Identities = 17/44 (38%), Positives = 23/44 (52%)
 Frame = +1

Query: 196 KERRRTDSNTPWRRSPNSNSP*KTNTMTPARGRNDRNTLTAPTR 327
           + R RT S TP  RSP S SP +  T    R R+ R+   +P +
Sbjct: 398 RSRTRTHSRTPRSRSPRSRSPSRERTKKTHRSRSSRSRSRSPPK 441


>AE014298-331|AAF45722.1|  560|Drosophila melanogaster CG16903-PA
           protein.
          Length = 560

 Score = 35.1 bits (77), Expect = 0.075
 Identities = 17/44 (38%), Positives = 23/44 (52%)
 Frame = +1

Query: 196 KERRRTDSNTPWRRSPNSNSP*KTNTMTPARGRNDRNTLTAPTR 327
           + R RT S TP  RSP S SP +  T    R R+ R+   +P +
Sbjct: 398 RSRTRTHSRTPRSRSPRSRSPSRERTKKTHRSRSSRSRSRSPPK 441


>AE014134-1839|AAF52914.1|  553|Drosophila melanogaster CG5375-PA
           protein.
          Length = 553

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 28/114 (24%), Positives = 46/114 (40%), Gaps = 7/114 (6%)
 Frame = +3

Query: 273 DDTGPGAKRPEYAYSTYKNLQDAIIAYLDDPDTKLPESEKAIAIQKL--FKNPNYYPRQQ 446
           D T P     E    T+KN QD+I++  D+ +T + E E     + +    N NY    +
Sbjct: 49  DPTFPSKMAKESGSETFKNGQDSILSNCDNGNTYISEEESVNRSENIPDIVNENYSATSE 108

Query: 447 IQR---HYPKTVEEYT-GYNAETERPVYKYTIPEKKPTYYGEEENINL-GNFEG 593
             +     P  +   +  Y    E P +  TI  K       +  I++ G+F G
Sbjct: 109 NSKRALQKPDLIYNLSQNYTTNPEFPSWSCTINSKYEGQLQGQSPIDIVGDFGG 162


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,893,026
Number of Sequences: 53049
Number of extensions: 625971
Number of successful extensions: 2228
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2173
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2228
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2503659279
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)