Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner13d13r
(720 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L32977-1|AAC41754.1| 274|Homo sapiens Rieske Fe-S protein protein. 290 4e-78
BC010035-1|AAH10035.1| 274|Homo sapiens ubiquinol-cytochrome c ... 290 4e-78
BC000649-1|AAH00649.1| 274|Homo sapiens ubiquinol-cytochrome c ... 290 4e-78
AC007786-1|AAD38242.1| 274|Homo sapiens UCRI_HUMAN protein. 290 4e-78
Z82206-1|CAI42711.1| 272|Homo sapiens ubiquinol-cytochrome c re... 287 4e-77
BC067832-1|AAH67832.1| 274|Homo sapiens ubiquinol-cytochrome c ... 286 5e-77
X75755-1|CAA53383.1| 221|Homo sapiens PR264/SC35 protein. 31 5.5
X62447-1|CAA44307.1| 221|Homo sapiens PR 264 protein. 31 5.5
M90104-1|AAA60306.1| 221|Homo sapiens splicing factor protein. 31 5.5
BT007250-1|AAP35914.1| 221|Homo sapiens splicing factor, argini... 31 5.5
BC070086-1|AAH70086.1| 221|Homo sapiens splicing factor, argini... 31 5.5
BC001303-1|AAH01303.1| 221|Homo sapiens SFRS2 protein protein. 31 5.5
BC000339-1|AAH00339.1| 221|Homo sapiens SFRS2 protein protein. 31 5.5
AK223252-1|BAD96972.1| 221|Homo sapiens splicing factor, argini... 31 5.5
AK092489-1|BAC03903.1| 201|Homo sapiens protein ( Homo sapiens ... 31 5.5
BC067819-1|AAH67819.1| 213|Homo sapiens TMEM29 protein protein. 30 9.6
>L32977-1|AAC41754.1| 274|Homo sapiens Rieske Fe-S protein protein.
Length = 274
Score = 290 bits (711), Expect = 4e-78
Identities = 131/222 (59%), Positives = 160/222 (72%)
Frame = -2
Query: 710 ETLHGSLPIQGLKVKAGTRVPAQVRFAHTDISYPDFSAYRRKETQDPTSKANETIDERQS 531
E+L G + L G VPA V ++HTDI PDFS YRR E D T + E+ + R+
Sbjct: 53 ESLSGQAVRRPLVASVGLNVPASVCYSHTDIKVPDFSEYRRLEVLDSTKSSRESSEARKG 112
Query: 530 FTYLIXXXXXXXXXXXXXXXVTHFVSSMSAAADVLALAKIEIKLAEIPEGKSVTFKWRGK 351
F+YL+ VT FVSSMSA+ADVLALAKIEIKL++IPEGK++ FKWRGK
Sbjct: 113 FSYLVTGVTTVGVAYAAKNAVTQFVSSMSASADVLALAKIEIKLSDIPEGKNMAFKWRGK 172
Query: 350 PLFIRHRTADEISTEKAVPVDTLRDPQHDDQRTQNPKWLVVIGVCTHLGCVPVANAGEFG 171
PLF+RHRT EI E AV + LRDPQHD R + P+W+++IGVCTHLGCVP+ANAG+FG
Sbjct: 173 PLFVRHRTQKEIEQEAAVELSQLRDPQHDLDRVKKPEWVILIGVCTHLGCVPIANAGDFG 232
Query: 170 GYYCPCHGSHYDASGRIRKGPAPLNLEVPPHTFMDEGLLVVG 45
GYYCPCHGSHYDASGRIR GPAPLNLEVP + F + +++VG
Sbjct: 233 GYYCPCHGSHYDASGRIRLGPAPLNLEVPTYEFTSDDMVIVG 274
>BC010035-1|AAH10035.1| 274|Homo sapiens ubiquinol-cytochrome c
reductase, Rieske iron-sulfur polypeptide 1 protein.
Length = 274
Score = 290 bits (711), Expect = 4e-78
Identities = 131/222 (59%), Positives = 160/222 (72%)
Frame = -2
Query: 710 ETLHGSLPIQGLKVKAGTRVPAQVRFAHTDISYPDFSAYRRKETQDPTSKANETIDERQS 531
E+L G + L G VPA V ++HTDI PDFS YRR E D T + E+ + R+
Sbjct: 53 ESLSGQAVRRPLVASVGLNVPASVCYSHTDIKVPDFSEYRRLEVLDSTKSSRESSEARKG 112
Query: 530 FTYLIXXXXXXXXXXXXXXXVTHFVSSMSAAADVLALAKIEIKLAEIPEGKSVTFKWRGK 351
F+YL+ VT FVSSMSA+ADVLALAKIEIKL++IPEGK++ FKWRGK
Sbjct: 113 FSYLVTGVTTVGVAYAAKNAVTQFVSSMSASADVLALAKIEIKLSDIPEGKNMAFKWRGK 172
Query: 350 PLFIRHRTADEISTEKAVPVDTLRDPQHDDQRTQNPKWLVVIGVCTHLGCVPVANAGEFG 171
PLF+RHRT EI E AV + LRDPQHD R + P+W+++IGVCTHLGCVP+ANAG+FG
Sbjct: 173 PLFVRHRTQKEIEQEAAVELSQLRDPQHDLDRVKKPEWVILIGVCTHLGCVPIANAGDFG 232
Query: 170 GYYCPCHGSHYDASGRIRKGPAPLNLEVPPHTFMDEGLLVVG 45
GYYCPCHGSHYDASGRIR GPAPLNLEVP + F + +++VG
Sbjct: 233 GYYCPCHGSHYDASGRIRLGPAPLNLEVPTYEFTSDDMVIVG 274
>BC000649-1|AAH00649.1| 274|Homo sapiens ubiquinol-cytochrome c
reductase, Rieske iron-sulfur polypeptide 1 protein.
Length = 274
Score = 290 bits (711), Expect = 4e-78
Identities = 131/222 (59%), Positives = 160/222 (72%)
Frame = -2
Query: 710 ETLHGSLPIQGLKVKAGTRVPAQVRFAHTDISYPDFSAYRRKETQDPTSKANETIDERQS 531
E+L G + L G VPA V ++HTDI PDFS YRR E D T + E+ + R+
Sbjct: 53 ESLSGQAVRRPLVASVGLNVPASVCYSHTDIKVPDFSEYRRLEVLDSTKSSRESSEARKG 112
Query: 530 FTYLIXXXXXXXXXXXXXXXVTHFVSSMSAAADVLALAKIEIKLAEIPEGKSVTFKWRGK 351
F+YL+ VT FVSSMSA+ADVLALAKIEIKL++IPEGK++ FKWRGK
Sbjct: 113 FSYLVTGVTTVGVAYAAKNAVTQFVSSMSASADVLALAKIEIKLSDIPEGKNMAFKWRGK 172
Query: 350 PLFIRHRTADEISTEKAVPVDTLRDPQHDDQRTQNPKWLVVIGVCTHLGCVPVANAGEFG 171
PLF+RHRT EI E AV + LRDPQHD R + P+W+++IGVCTHLGCVP+ANAG+FG
Sbjct: 173 PLFVRHRTQKEIEQEAAVELSQLRDPQHDLDRVKKPEWVILIGVCTHLGCVPIANAGDFG 232
Query: 170 GYYCPCHGSHYDASGRIRKGPAPLNLEVPPHTFMDEGLLVVG 45
GYYCPCHGSHYDASGRIR GPAPLNLEVP + F + +++VG
Sbjct: 233 GYYCPCHGSHYDASGRIRLGPAPLNLEVPTYEFTSDDMVIVG 274
>AC007786-1|AAD38242.1| 274|Homo sapiens UCRI_HUMAN protein.
Length = 274
Score = 290 bits (711), Expect = 4e-78
Identities = 131/222 (59%), Positives = 160/222 (72%)
Frame = -2
Query: 710 ETLHGSLPIQGLKVKAGTRVPAQVRFAHTDISYPDFSAYRRKETQDPTSKANETIDERQS 531
E+L G + L G VPA V ++HTDI PDFS YRR E D T + E+ + R+
Sbjct: 53 ESLSGQAVRRPLVASVGLNVPASVCYSHTDIKVPDFSEYRRLEVLDSTKSSRESSEARKG 112
Query: 530 FTYLIXXXXXXXXXXXXXXXVTHFVSSMSAAADVLALAKIEIKLAEIPEGKSVTFKWRGK 351
F+YL+ VT FVSSMSA+ADVLALAKIEIKL++IPEGK++ FKWRGK
Sbjct: 113 FSYLVTGVTTVGVAYAAKNAVTQFVSSMSASADVLALAKIEIKLSDIPEGKNMAFKWRGK 172
Query: 350 PLFIRHRTADEISTEKAVPVDTLRDPQHDDQRTQNPKWLVVIGVCTHLGCVPVANAGEFG 171
PLF+RHRT EI E AV + LRDPQHD R + P+W+++IGVCTHLGCVP+ANAG+FG
Sbjct: 173 PLFVRHRTQKEIEQEAAVELSQLRDPQHDLDRVKKPEWVILIGVCTHLGCVPIANAGDFG 232
Query: 170 GYYCPCHGSHYDASGRIRKGPAPLNLEVPPHTFMDEGLLVVG 45
GYYCPCHGSHYDASGRIR GPAPLNLEVP + F + +++VG
Sbjct: 233 GYYCPCHGSHYDASGRIRLGPAPLNLEVPTYEFTSDDMVIVG 274
>Z82206-1|CAI42711.1| 272|Homo sapiens ubiquinol-cytochrome c
reductase, Rieske iron-sulfur polypeptide-like 1
protein.
Length = 272
Score = 287 bits (703), Expect = 4e-77
Identities = 129/222 (58%), Positives = 159/222 (71%)
Frame = -2
Query: 710 ETLHGSLPIQGLKVKAGTRVPAQVRFAHTDISYPDFSAYRRKETQDPTSKANETIDERQS 531
E+L G + L G VPA V ++HTD+ PDFS YRR E D T + E+ + R+
Sbjct: 51 ESLSGQAVRRPLVASVGLNVPASVCYSHTDVKVPDFSEYRRLEVLDSTKSSRESTEARKG 110
Query: 530 FTYLIXXXXXXXXXXXXXXXVTHFVSSMSAAADVLALAKIEIKLAEIPEGKSVTFKWRGK 351
F+YL+ VT FVSSMSA+ADVLALAKIEIKL++IPEGK++ FKWRGK
Sbjct: 111 FSYLVTGVTTVGVAYAAKNAVTQFVSSMSASADVLALAKIEIKLSDIPEGKNMAFKWRGK 170
Query: 350 PLFIRHRTADEISTEKAVPVDTLRDPQHDDQRTQNPKWLVVIGVCTHLGCVPVANAGEFG 171
PLF+RHRT EI E AV + LRDPQHD R + P+W+++IGVCTHLGCVP+ANAG+FG
Sbjct: 171 PLFVRHRTQKEIKQEAAVELSQLRDPQHDLDRVKKPEWVILIGVCTHLGCVPIANAGDFG 230
Query: 170 GYYCPCHGSHYDASGRIRKGPAPLNLEVPPHTFMDEGLLVVG 45
GYYCPCHGSHYDASGRIR GPA LNLEVP + F + +++VG
Sbjct: 231 GYYCPCHGSHYDASGRIRLGPATLNLEVPTYEFTSDDMVIVG 272
>BC067832-1|AAH67832.1| 274|Homo sapiens ubiquinol-cytochrome c
reductase, Rieske iron-sulfur polypeptide 1 protein.
Length = 274
Score = 286 bits (702), Expect = 5e-77
Identities = 130/222 (58%), Positives = 159/222 (71%)
Frame = -2
Query: 710 ETLHGSLPIQGLKVKAGTRVPAQVRFAHTDISYPDFSAYRRKETQDPTSKANETIDERQS 531
E+L G + L G V A V ++HTDI PDFS YRR E D T + E+ + R+
Sbjct: 53 ESLSGQAVRRPLVASVGLNVHASVCYSHTDIKVPDFSEYRRLEVLDSTKSSRESSEARKG 112
Query: 530 FTYLIXXXXXXXXXXXXXXXVTHFVSSMSAAADVLALAKIEIKLAEIPEGKSVTFKWRGK 351
F+YL+ VT FVSSMSA+ADVLALAKIEIKL++IPEGK++ FKWRGK
Sbjct: 113 FSYLVTGVTTVGVAYAAKNAVTQFVSSMSASADVLALAKIEIKLSDIPEGKNMAFKWRGK 172
Query: 350 PLFIRHRTADEISTEKAVPVDTLRDPQHDDQRTQNPKWLVVIGVCTHLGCVPVANAGEFG 171
PLF+RHRT EI E AV + LRDPQHD R + P+W+++IGVCTHLGCVP+ANAG+FG
Sbjct: 173 PLFVRHRTQKEIEQEAAVELSQLRDPQHDLDRVKKPEWVILIGVCTHLGCVPIANAGDFG 232
Query: 170 GYYCPCHGSHYDASGRIRKGPAPLNLEVPPHTFMDEGLLVVG 45
GYYCPCHGSHYDASGRIR GPAPLNLEVP + F + +++VG
Sbjct: 233 GYYCPCHGSHYDASGRIRLGPAPLNLEVPTYEFTSDDMVIVG 274
>X75755-1|CAA53383.1| 221|Homo sapiens PR264/SC35 protein.
Length = 221
Score = 30.7 bits (66), Expect = 5.5
Identities = 20/65 (30%), Positives = 28/65 (43%)
Frame = +2
Query: 128 RKHRSGSRGRDSSNPRIHQHWLRARIPSGCIRRSRPTTWGFGCVDRRAEGHGACRQAQPS 307
R+ RS SR R S R + R++ S RSR T+ +++ R S
Sbjct: 124 RRRRSRSRSRSRSRSRSRSRYSRSKSRSRTRSRSRSTSKSRSARRSKSKSSSVSRSRSRS 183
Query: 308 RSRFR 322
RSR R
Sbjct: 184 RSRSR 188
>X62447-1|CAA44307.1| 221|Homo sapiens PR 264 protein.
Length = 221
Score = 30.7 bits (66), Expect = 5.5
Identities = 20/65 (30%), Positives = 28/65 (43%)
Frame = +2
Query: 128 RKHRSGSRGRDSSNPRIHQHWLRARIPSGCIRRSRPTTWGFGCVDRRAEGHGACRQAQPS 307
R+ RS SR R S R + R++ S RSR T+ +++ R S
Sbjct: 124 RRRRSRSRSRSRSRSRSRSRYSRSKSRSRTRSRSRSTSKSRSARRSKSKSSSVSRSRSRS 183
Query: 308 RSRFR 322
RSR R
Sbjct: 184 RSRSR 188
>M90104-1|AAA60306.1| 221|Homo sapiens splicing factor protein.
Length = 221
Score = 30.7 bits (66), Expect = 5.5
Identities = 20/65 (30%), Positives = 28/65 (43%)
Frame = +2
Query: 128 RKHRSGSRGRDSSNPRIHQHWLRARIPSGCIRRSRPTTWGFGCVDRRAEGHGACRQAQPS 307
R+ RS SR R S R + R++ S RSR T+ +++ R S
Sbjct: 124 RRRRSRSRSRSRSRSRSRSRYSRSKSRSRTRSRSRSTSKSRSARRSKSKSSSVSRSRSRS 183
Query: 308 RSRFR 322
RSR R
Sbjct: 184 RSRSR 188
>BT007250-1|AAP35914.1| 221|Homo sapiens splicing factor,
arginine/serine-rich 2 protein.
Length = 221
Score = 30.7 bits (66), Expect = 5.5
Identities = 20/65 (30%), Positives = 28/65 (43%)
Frame = +2
Query: 128 RKHRSGSRGRDSSNPRIHQHWLRARIPSGCIRRSRPTTWGFGCVDRRAEGHGACRQAQPS 307
R+ RS SR R S R + R++ S RSR T+ +++ R S
Sbjct: 124 RRRRSRSRSRSRSRSRSRSRYSRSKSRSRTRSRSRSTSKSRSARRSKSKSSSVSRSRSRS 183
Query: 308 RSRFR 322
RSR R
Sbjct: 184 RSRSR 188
>BC070086-1|AAH70086.1| 221|Homo sapiens splicing factor,
arginine/serine-rich 2 protein.
Length = 221
Score = 30.7 bits (66), Expect = 5.5
Identities = 20/65 (30%), Positives = 28/65 (43%)
Frame = +2
Query: 128 RKHRSGSRGRDSSNPRIHQHWLRARIPSGCIRRSRPTTWGFGCVDRRAEGHGACRQAQPS 307
R+ RS SR R S R + R++ S RSR T+ +++ R S
Sbjct: 124 RRRRSRSRSRSRSRSRSRSRYSRSKSRSRTRSRSRSTSKSRSARRSKSKSSSVSRSRSRS 183
Query: 308 RSRFR 322
RSR R
Sbjct: 184 RSRSR 188
>BC001303-1|AAH01303.1| 221|Homo sapiens SFRS2 protein protein.
Length = 221
Score = 30.7 bits (66), Expect = 5.5
Identities = 20/65 (30%), Positives = 28/65 (43%)
Frame = +2
Query: 128 RKHRSGSRGRDSSNPRIHQHWLRARIPSGCIRRSRPTTWGFGCVDRRAEGHGACRQAQPS 307
R+ RS SR R S R + R++ S RSR T+ +++ R S
Sbjct: 124 RRRRSRSRSRSRSRSRSRSRYSRSKSRSRTRSRSRSTSKSRSARRSKSKSSSVSRSRSRS 183
Query: 308 RSRFR 322
RSR R
Sbjct: 184 RSRSR 188
>BC000339-1|AAH00339.1| 221|Homo sapiens SFRS2 protein protein.
Length = 221
Score = 30.7 bits (66), Expect = 5.5
Identities = 20/65 (30%), Positives = 28/65 (43%)
Frame = +2
Query: 128 RKHRSGSRGRDSSNPRIHQHWLRARIPSGCIRRSRPTTWGFGCVDRRAEGHGACRQAQPS 307
R+ RS SR R S R + R++ S RSR T+ +++ R S
Sbjct: 124 RRRRSRSRSRSRSRSRSRSRYSRSKSRSRTRSRSRSTSKSRSARRSKSKSSSVSRSRSRS 183
Query: 308 RSRFR 322
RSR R
Sbjct: 184 RSRSR 188
>AK223252-1|BAD96972.1| 221|Homo sapiens splicing factor,
arginine/serine-rich 2 variant protein.
Length = 221
Score = 30.7 bits (66), Expect = 5.5
Identities = 20/65 (30%), Positives = 28/65 (43%)
Frame = +2
Query: 128 RKHRSGSRGRDSSNPRIHQHWLRARIPSGCIRRSRPTTWGFGCVDRRAEGHGACRQAQPS 307
R+ RS SR R S R + R++ S RSR T+ +++ R S
Sbjct: 124 RRRRSRSRSRSRSRSRSRSRYSRSKSRSRTRSRSRSTSKSRSARRSKSKSSSVSRSRSRS 183
Query: 308 RSRFR 322
RSR R
Sbjct: 184 RSRSR 188
>AK092489-1|BAC03903.1| 201|Homo sapiens protein ( Homo sapiens
cDNA FLJ35170 fis, clone PLACE6012942, highly similar to
SPLICING FACTOR, ARGININE/SERINE-RICH 2. ).
Length = 201
Score = 30.7 bits (66), Expect = 5.5
Identities = 20/65 (30%), Positives = 28/65 (43%)
Frame = +2
Query: 128 RKHRSGSRGRDSSNPRIHQHWLRARIPSGCIRRSRPTTWGFGCVDRRAEGHGACRQAQPS 307
R+ RS SR R S R + R++ S RSR T+ +++ R S
Sbjct: 104 RRRRSRSRSRSRSRSRSRSRYSRSKSRSRTRSRSRSTSKSRSARRSKSKSSSVSRSRSRS 163
Query: 308 RSRFR 322
RSR R
Sbjct: 164 RSRSR 168
>BC067819-1|AAH67819.1| 213|Homo sapiens TMEM29 protein protein.
Length = 213
Score = 29.9 bits (64), Expect = 9.6
Identities = 21/61 (34%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Frame = -1
Query: 360 ERKTIVYPSQDSRRNLDREGCACRHAP*PSARRSTHPKPQVVGRDRRMHPLGMRA--RSQ 187
E KT+ + L R+ RH R H P VGR+ R+ PLG R+ R Q
Sbjct: 69 EEKTLEERRWERLEFLQRKKAFLRHV---RRRHRDHMAPYAVGREARISPLGDRSQNRFQ 125
Query: 186 C 184
C
Sbjct: 126 C 126
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,558,611
Number of Sequences: 237096
Number of extensions: 2300713
Number of successful extensions: 5160
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 4780
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5160
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8455186714
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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