Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner13d07f
(687 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024746-13|AAF60407.2| 480|Caenorhabditis elegans Hypothetical... 31 0.77
Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z75549-2|CAA99916.1| 313|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z74041-1|CAA98520.1| 255|Caenorhabditis elegans Hypothetical pr... 28 5.4
U97009-10|AAC69033.1| 533|Caenorhabditis elegans Udp-glucuronos... 28 5.4
AF101318-2|AAK68599.1| 331|Caenorhabditis elegans Seven tm rece... 28 5.4
Z92786-3|CAB63202.1| 488|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z83216-11|CAB05679.2| 404|Caenorhabditis elegans Hypothetical p... 28 7.2
Z81491-10|CAB04023.3| 282|Caenorhabditis elegans Hypothetical p... 28 7.2
U55364-14|AAA97979.1| 210|Caenorhabditis elegans Hypothetical p... 28 7.2
U27312-12|AAA68255.1| 451|Caenorhabditis elegans Hypothetical p... 28 7.2
AC006795-4|AAK84612.2| 430|Caenorhabditis elegans Hypothetical ... 28 7.2
Z79756-11|CAB02119.2| 614|Caenorhabditis elegans Hypothetical p... 27 9.5
Z68302-3|CAA92630.1| 184|Caenorhabditis elegans Hypothetical pr... 27 9.5
M55535-1|AAA28103.1| 187|Caenorhabditis elegans ras protein pro... 27 9.5
>AC024746-13|AAF60407.2| 480|Caenorhabditis elegans Hypothetical
protein Y110A2AL.12a protein.
Length = 480
Score = 31.1 bits (67), Expect = 0.77
Identities = 20/70 (28%), Positives = 37/70 (52%)
Frame = -1
Query: 549 TAFNLSSKTYLLPFSVTL*ALLSFVTA*NKSLPFIFVRLITSALKVPYFLKLLSPVLYTY 370
T + + L F +T+ L F+ N +LP+IF+ + Y+LK ++ V++
Sbjct: 18 TLTGCAQRELFLTFLITMLGL--FIR--NLTLPWIFLGRRYDTGRFTYWLKFVADVIFLC 73
Query: 369 IPSLLATYIV 340
+PSLLA ++
Sbjct: 74 VPSLLAMTVL 83
>Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical
protein F33E2.6 protein.
Length = 846
Score = 28.7 bits (61), Expect = 4.1
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = -1
Query: 180 TKAPTT*SSVEYSSTLRCLKTEPLSTLEAVTLSPTTKM 67
T+APTT + + + L+TE L T ++ T++P TK+
Sbjct: 798 TEAPTTEAPMTITPRTEQLRTEQLRTDQSKTVTPKTKI 835
>Z75549-2|CAA99916.1| 313|Caenorhabditis elegans Hypothetical
protein T19C4.2 protein.
Length = 313
Score = 28.3 bits (60), Expect = 5.4
Identities = 19/55 (34%), Positives = 32/55 (58%)
Frame = -1
Query: 639 IFSIVSFTLNTSLSKVT*CNTLKLSNITCLTAFNLSSKTYLLPFSVTL*ALLSFV 475
++ ++ F +NT + +T TLKLS++TC T LSS +L + TL + S +
Sbjct: 38 VWYLLDFLMNTLTTGIT-FYTLKLSSVTCQTC-ALSSIYLMLENNFTLNIMYSLM 90
>Z74041-1|CAA98520.1| 255|Caenorhabditis elegans Hypothetical
protein T03F7.5 protein.
Length = 255
Score = 28.3 bits (60), Expect = 5.4
Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = -3
Query: 475 YGVKQIASVHFC*AYNVSFESTIFFKAF-ISGFIYIYPVIASYVYRAVII 329
+ ++++ S+ F + T+FFK F ++GF++ SYVY VI+
Sbjct: 54 FTIERVLSIQFS-----KIQRTLFFKLFFLAGFVFENGFAISYVYTNVIL 98
>U97009-10|AAC69033.1| 533|Caenorhabditis elegans
Udp-glucuronosyltransferase protein11 protein.
Length = 533
Score = 28.3 bits (60), Expect = 5.4
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Frame = -3
Query: 631 HSLFHFKYFIIQSDIVQYIEV--IKHNLFDGFQFIIQNVFVTIFSDFVSFIVVCYGVKQI 458
H F K+ ++S I + +V I H D F+I FV+I + ++SF +VC + +I
Sbjct: 469 HLEFAIKFPNLRSQIPEINQVGPIAHYYLDVIVFLI---FVSIITAYISFQIVCRILSRI 525
Query: 457 AS 452
S
Sbjct: 526 LS 527
>AF101318-2|AAK68599.1| 331|Caenorhabditis elegans Seven tm
receptor protein 66 protein.
Length = 331
Score = 28.3 bits (60), Expect = 5.4
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Frame = -3
Query: 532 IQNVFVTIFSDFVSFIVVCYGVKQIASVHFC*AYNVSFES--TIFFKAFISGFIYIYPVI 359
I N F+T++S F + + SV F Y F+S T FF+ F G +YP++
Sbjct: 86 ISNAFITVWS---CFYLTTFS---FISVLFIYRYLCLFDSSKTRFFEGFKGGLWMLYPLL 139
Query: 358 ASYVYRAVI 332
Y + I
Sbjct: 140 PGICYASTI 148
>Z92786-3|CAB63202.1| 488|Caenorhabditis elegans Hypothetical
protein F47H4.6 protein.
Length = 488
Score = 27.9 bits (59), Expect = 7.2
Identities = 17/58 (29%), Positives = 31/58 (53%)
Frame = +2
Query: 107 LNGSVFRQRSVELYSTEDQVVGAFVISNAEKSDGKIYTIHADVNDNRREKGVYEVDLN 280
L G FR+ S L + + +V+ V++++ +S+G + +H D RE V+E N
Sbjct: 338 LEGFTFREVSEVLRNCKPRVLNMIVLNSSTESNGIEHLVHL---DQWREARVFESSRN 392
>Z83216-11|CAB05679.2| 404|Caenorhabditis elegans Hypothetical
protein C08F11.13 protein.
Length = 404
Score = 27.9 bits (59), Expect = 7.2
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = +2
Query: 77 VGLSVTASKVLNGSVFRQRSVELYSTEDQVVGAFVISNAEKSDGKIYTIHA 229
VG +K N +++ +++ ST V+GAF+ S K+ G+++ I A
Sbjct: 175 VGSHRWMNKYSNSTIWISIILQIASTFTLVIGAFIRSEDPKTSGRMFFIGA 225
>Z81491-10|CAB04023.3| 282|Caenorhabditis elegans Hypothetical
protein D1086.6 protein.
Length = 282
Score = 27.9 bits (59), Expect = 7.2
Identities = 24/84 (28%), Positives = 35/84 (41%)
Frame = -1
Query: 279 FKSTSYTPFSLRLSLTSACIVYILPSLFSALDITKAPTT*SSVEYSSTLRCLKTEPLSTL 100
F+ + YTP ++TS +V S S T P+T +++ SST T +
Sbjct: 122 FQCSKYTPAP---TVTSTTVVDTSES--STSQSTTTPSTTTTIIVSSTTTTNPTTSTTPT 176
Query: 99 EAVTLSPTTKMRRVAAFILDIQFP 28
T +PTT A DI P
Sbjct: 177 TPTTTTPTTSTTTTARGTTDIPAP 200
>U55364-14|AAA97979.1| 210|Caenorhabditis elegans Hypothetical
protein F21C10.1 protein.
Length = 210
Score = 27.9 bits (59), Expect = 7.2
Identities = 11/37 (29%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = +2
Query: 467 YAVTNDNKAYKVTENGN--KYVLDDKLKAVKQVMFDN 571
++ + + K Y +T N Y++D K + + +V+FDN
Sbjct: 60 FSYSEETKMYVITSPDNPLNYIIDSKSEELNKVIFDN 96
>U27312-12|AAA68255.1| 451|Caenorhabditis elegans Hypothetical
protein F26A1.13 protein.
Length = 451
Score = 27.9 bits (59), Expect = 7.2
Identities = 15/54 (27%), Positives = 30/54 (55%)
Frame = +2
Query: 497 KVTENGNKYVLDDKLKAVKQVMFDNFNVLHYVTLDNEVFKVKETMEKIDFNVKS 658
K+ ++ LD K++ + F LHY+++D V VKE +E + +++K+
Sbjct: 349 KIEKSSEVKELDRKIREAHNNPW--FLDLHYMSVDGAVKLVKEAIEAVKYHLKA 400
>AC006795-4|AAK84612.2| 430|Caenorhabditis elegans Hypothetical
protein Y50D4B.4 protein.
Length = 430
Score = 27.9 bits (59), Expect = 7.2
Identities = 18/50 (36%), Positives = 28/50 (56%)
Frame = -3
Query: 655 FNIKIDFFHSLFHFKYFIIQSDIVQYIEVIKHNLFDGFQFIIQNVFVTIF 506
FN KI FF++ FH Y I D + I++ K L D + ++NV V ++
Sbjct: 378 FNGKITFFNNAFHRLYLNITLD--EDIQIFKTKLDD--EGSLENVSVEVY 423
>Z79756-11|CAB02119.2| 614|Caenorhabditis elegans Hypothetical
protein F53C11.6 protein.
Length = 614
Score = 27.5 bits (58), Expect = 9.5
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -3
Query: 610 YFIIQSDIVQYIEVIKHNLFDGFQFIIQNVFVTIFSDFV 494
Y + S I+ ++E N+ DGF F++ +V F D V
Sbjct: 255 YIGLSSWIISWVE--NWNMMDGFYFVMMSVLTIGFGDLV 291
>Z68302-3|CAA92630.1| 184|Caenorhabditis elegans Hypothetical
protein ZK792.6 protein.
Length = 184
Score = 27.5 bits (58), Expect = 9.5
Identities = 11/48 (22%), Positives = 24/48 (50%)
Frame = +2
Query: 377 YKTGDKSFKKYGTFKADVISLTKMNGSDLFYAVTNDNKAYKVTENGNK 520
++T ++ K YG D + T+M + FY + + + ++ + NK
Sbjct: 127 FRTVSETAKGYGIPNVDTSAKTRMGVDEAFYTLVREIRKHRERHDNNK 174
>M55535-1|AAA28103.1| 187|Caenorhabditis elegans ras protein
protein.
Length = 187
Score = 27.5 bits (58), Expect = 9.5
Identities = 11/48 (22%), Positives = 24/48 (50%)
Frame = +2
Query: 377 YKTGDKSFKKYGTFKADVISLTKMNGSDLFYAVTNDNKAYKVTENGNK 520
++T ++ K YG D + T+M + FY + + + ++ + NK
Sbjct: 130 FRTVSETAKGYGIPNVDTSAKTRMGVDEAFYTLVREIRKHRERHDNNK 177
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,693,465
Number of Sequences: 27780
Number of extensions: 296479
Number of successful extensions: 1008
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 972
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1008
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1571291122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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