Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner13d02r
         (759 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061579-1|AAL29127.1|  613|Drosophila melanogaster SD02991p pro...    30   3.0  
AF247763-1|AAF74194.1|  613|Drosophila melanogaster SCAR protein.      30   3.0  
AE014134-2001|AAF53042.1|  613|Drosophila melanogaster CG4636-PA...    30   3.0  
AE013599-3404|AAF46853.2| 2733|Drosophila melanogaster CG4554-PA...    30   3.0  
AY118319-1|AAM48348.1|  781|Drosophila melanogaster HL08052p pro...    29   6.9  
AE014298-3026|AAF50901.1|  781|Drosophila melanogaster CG1692-PA...    29   6.9  
BT003459-1|AAO39462.1|  925|Drosophila melanogaster RH30917p pro...    29   9.1  
AE014298-780|AAF46066.2|  725|Drosophila melanogaster CG33080-PB...    29   9.1  
AE014298-779|AAF46068.2|  925|Drosophila melanogaster CG33080-PA...    29   9.1  

>AY061579-1|AAL29127.1|  613|Drosophila melanogaster SD02991p
           protein.
          Length = 613

 Score = 30.3 bits (65), Expect = 3.0
 Identities = 13/22 (59%), Positives = 14/22 (63%)
 Frame = -3

Query: 277 YDPRSPRPQSLR*NRPYTSETI 212
           YD R PRP S+  NR Y SE I
Sbjct: 253 YDTRPPRPNSIELNRSYQSEQI 274


>AF247763-1|AAF74194.1|  613|Drosophila melanogaster SCAR protein.
          Length = 613

 Score = 30.3 bits (65), Expect = 3.0
 Identities = 13/22 (59%), Positives = 14/22 (63%)
 Frame = -3

Query: 277 YDPRSPRPQSLR*NRPYTSETI 212
           YD R PRP S+  NR Y SE I
Sbjct: 253 YDTRPPRPNSIELNRSYQSEQI 274


>AE014134-2001|AAF53042.1|  613|Drosophila melanogaster CG4636-PA
           protein.
          Length = 613

 Score = 30.3 bits (65), Expect = 3.0
 Identities = 13/22 (59%), Positives = 14/22 (63%)
 Frame = -3

Query: 277 YDPRSPRPQSLR*NRPYTSETI 212
           YD R PRP S+  NR Y SE I
Sbjct: 253 YDTRPPRPNSIELNRSYQSEQI 274


>AE013599-3404|AAF46853.2| 2733|Drosophila melanogaster CG4554-PA
           protein.
          Length = 2733

 Score = 30.3 bits (65), Expect = 3.0
 Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 9/65 (13%)
 Frame = -1

Query: 405 KIGLHKGPLRRFTGNATAQ-VTYPYRLDQSE-----GETYLRLE---EENLDMILDLPDL 253
           +I LHK PL +  GN+ AQ V YP +L Q +      +  L L+   EE+L +I+ +P L
Sbjct: 433 RIVLHKRPL-KVDGNSLAQWVAYPLQLKQKDTIKLVEQELLHLDLTKEEHLLLIILVPHL 491

Query: 252 SHFDK 238
             F+K
Sbjct: 492 RGFNK 496


>AY118319-1|AAM48348.1|  781|Drosophila melanogaster HL08052p
           protein.
          Length = 781

 Score = 29.1 bits (62), Expect = 6.9
 Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 2/77 (2%)
 Frame = -1

Query: 378 RRFTGNATAQVTYPYRLDQSEGETY-LRLEEENLDMILDLPDLSHFDKTDPTQARLSEWS 202
           RRF G  T    YP+ +D    ET+  R E+  L  +  +  L  F   +    R  E+S
Sbjct: 270 RRFFGGGTINYAYPHAMDYQLRETFHQRYEDGTLPFLSIVGLLEGFRTLERLVPRTDEFS 329

Query: 201 AWAYRVVQHA-DIAKHV 154
               R+ +H   +AK++
Sbjct: 330 TME-RISRHVFGLAKYL 345


>AE014298-3026|AAF50901.1|  781|Drosophila melanogaster CG1692-PA
           protein.
          Length = 781

 Score = 29.1 bits (62), Expect = 6.9
 Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 2/77 (2%)
 Frame = -1

Query: 378 RRFTGNATAQVTYPYRLDQSEGETY-LRLEEENLDMILDLPDLSHFDKTDPTQARLSEWS 202
           RRF G  T    YP+ +D    ET+  R E+  L  +  +  L  F   +    R  E+S
Sbjct: 270 RRFFGGGTINYAYPHAMDYQLRETFHQRYEDGTLPFLSIVGLLEGFRTLERLVPRTDEFS 329

Query: 201 AWAYRVVQHA-DIAKHV 154
               R+ +H   +AK++
Sbjct: 330 TME-RISRHVFGLAKYL 345


>BT003459-1|AAO39462.1|  925|Drosophila melanogaster RH30917p
           protein.
          Length = 925

 Score = 28.7 bits (61), Expect = 9.1
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = -3

Query: 148 VTHDTTARPYWSIPTKEIPASLSRRRIFKYT 56
           V H     P W IP  E+P SL+   I  Y+
Sbjct: 505 VLHSLLEEPVWRIPHTELPESLNESAICDYS 535


>AE014298-780|AAF46066.2|  725|Drosophila melanogaster CG33080-PB,
           isoform B protein.
          Length = 725

 Score = 28.7 bits (61), Expect = 9.1
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = -3

Query: 148 VTHDTTARPYWSIPTKEIPASLSRRRIFKYT 56
           V H     P W IP  E+P SL+   I  Y+
Sbjct: 305 VLHSLLEEPVWRIPHTELPESLNESAICDYS 335


>AE014298-779|AAF46068.2|  925|Drosophila melanogaster CG33080-PA,
           isoform A protein.
          Length = 925

 Score = 28.7 bits (61), Expect = 9.1
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = -3

Query: 148 VTHDTTARPYWSIPTKEIPASLSRRRIFKYT 56
           V H     P W IP  E+P SL+   I  Y+
Sbjct: 505 VLHSLLEEPVWRIPHTELPESLNESAICDYS 535


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,421,866
Number of Sequences: 53049
Number of extensions: 668222
Number of successful extensions: 1644
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1607
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1644
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3478915869
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)