Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner13c24f
(402 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z30317-2|CAA82968.2| 1142|Caenorhabditis elegans Hypothetical pr... 32 0.18
U00063-8|AAM48535.1| 1031|Caenorhabditis elegans Hypothetical pr... 29 0.94
U00063-7|AAK18965.1| 1028|Caenorhabditis elegans Hypothetical pr... 29 0.94
Z67995-6|CAA91946.1| 2692|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z67737-7|CAA91543.1| 2692|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z49130-1|CAA88965.2| 708|Caenorhabditis elegans Hypothetical pr... 27 3.8
Z92847-3|CAB07422.2| 323|Caenorhabditis elegans Hypothetical pr... 27 5.0
U39652-2|AAA80404.1| 817|Caenorhabditis elegans Hypothetical pr... 27 5.0
U00052-7|AAK21422.2| 232|Caenorhabditis elegans Fatty acid/reti... 27 5.0
Z99282-1|CAB16532.1| 1037|Caenorhabditis elegans Hypothetical pr... 27 6.7
Z81109-2|CAB03244.1| 408|Caenorhabditis elegans Hypothetical pr... 27 6.7
Z46242-3|CAA86338.2| 680|Caenorhabditis elegans Hypothetical pr... 27 6.7
Z46242-2|CAA86335.2| 683|Caenorhabditis elegans Hypothetical pr... 27 6.7
U23168-4|AAU87833.1| 1379|Caenorhabditis elegans Temporarily ass... 27 6.7
U23168-3|AAU87831.1| 4034|Caenorhabditis elegans Temporarily ass... 27 6.7
U23168-2|AAC38806.2| 1633|Caenorhabditis elegans Temporarily ass... 27 6.7
U23168-1|AAU87832.1| 7548|Caenorhabditis elegans Temporarily ass... 27 6.7
AL033514-34|CAA22113.1| 463|Caenorhabditis elegans Hypothetical... 27 6.7
AL033514-33|CAB54500.1| 480|Caenorhabditis elegans Hypothetical... 27 6.7
AF160493-1|AAD43348.1| 465|Caenorhabditis elegans DNA-binding p... 27 6.7
AF160492-1|AAD43347.1| 463|Caenorhabditis elegans DNA-binding p... 27 6.7
Z73898-3|CAC42390.2| 606|Caenorhabditis elegans Hypothetical pr... 26 8.8
Z73898-2|CAC42388.1| 667|Caenorhabditis elegans Hypothetical pr... 26 8.8
Z73898-1|CAC42389.1| 647|Caenorhabditis elegans Hypothetical pr... 26 8.8
Z19157-1|CAB63418.2| 733|Caenorhabditis elegans Hypothetical pr... 26 8.8
M23064-1|AAA27892.1| 609|Caenorhabditis elegans Na+/H+ antiport... 26 8.8
D86922-1|BAA13180.1| 733|Caenorhabditis elegans cyclic nucleoti... 26 8.8
AF497835-1|AAM18113.1| 647|Caenorhabditis elegans putative Na-H... 26 8.8
AF497834-1|AAM18112.1| 667|Caenorhabditis elegans putative Na-H... 26 8.8
AF067211-16|AAC16988.3| 399|Caenorhabditis elegans Hypothetical... 26 8.8
AF022985-3|AAB69970.1| 355|Caenorhabditis elegans Hypothetical ... 26 8.8
AC024793-1|AAF60692.2| 649|Caenorhabditis elegans Atm (ataxia t... 26 8.8
>Z30317-2|CAA82968.2| 1142|Caenorhabditis elegans Hypothetical protein
T16G12.5 protein.
Length = 1142
Score = 31.9 bits (69), Expect = 0.18
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
Frame = +2
Query: 122 PKEDNSLNTLAESAKKTIEELREKVESALAP----ETVKKNFGTMVDSFNEFYKNLKPAE 289
P ED S N + AKK + +L+ V AP T ++ + VD NE+ + L E
Sbjct: 834 PSEDVSFNLAVDEAKKLLRDLKIDVNQVNAPTLPQRTDRQRYNQQVDVCNEWIEELHDDE 893
>U00063-8|AAM48535.1| 1031|Caenorhabditis elegans Hypothetical
protein F56C9.10b protein.
Length = 1031
Score = 29.5 bits (63), Expect = 0.94
Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Frame = +2
Query: 110 KPDAP-KEDNSLNTLAESAKKTIEELREKVESALAPETVK-KNF-GTMVD 250
+P+ P K+D L E +K EE +EKVE +AP K KN G ++D
Sbjct: 39 QPENPIKKDPKPEVLEEVVEKNREEDKEKVEETVAPTIEKEKNISGDLLD 88
>U00063-7|AAK18965.1| 1028|Caenorhabditis elegans Hypothetical
protein F56C9.10a protein.
Length = 1028
Score = 29.5 bits (63), Expect = 0.94
Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Frame = +2
Query: 110 KPDAP-KEDNSLNTLAESAKKTIEELREKVESALAPETVK-KNF-GTMVD 250
+P+ P K+D L E +K EE +EKVE +AP K KN G ++D
Sbjct: 39 QPENPIKKDPKPEVLEEVVEKNREEDKEKVEETVAPTIEKEKNISGDLLD 88
>Z67995-6|CAA91946.1| 2692|Caenorhabditis elegans Hypothetical
protein T01H10.8 protein.
Length = 2692
Score = 28.7 bits (61), Expect = 1.7
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = +2
Query: 128 EDNSLNTLAESAKKTIEELREKVESALAPETVKKNFGTMVDSFNEFYKNLKPAEAPK 298
E++S L K TI + L + K FG ++D FN + NL+ ++ K
Sbjct: 125 EEDSQILLLRLLKTTISS-KSNYHHRLVLDECKVGFGMLIDDFNNGFNNLEKSDVRK 180
>Z67737-7|CAA91543.1| 2692|Caenorhabditis elegans Hypothetical
protein T01H10.8 protein.
Length = 2692
Score = 28.7 bits (61), Expect = 1.7
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = +2
Query: 128 EDNSLNTLAESAKKTIEELREKVESALAPETVKKNFGTMVDSFNEFYKNLKPAEAPK 298
E++S L K TI + L + K FG ++D FN + NL+ ++ K
Sbjct: 125 EEDSQILLLRLLKTTISS-KSNYHHRLVLDECKVGFGMLIDDFNNGFNNLEKSDVRK 180
>Z49130-1|CAA88965.2| 708|Caenorhabditis elegans Hypothetical
protein T06D8.2 protein.
Length = 708
Score = 27.5 bits (58), Expect = 3.8
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +2
Query: 155 ESAKKTIEELREKVESALAPETVK 226
E+ K+ IEE+REK++S A +T K
Sbjct: 478 ENRKEGIEEIREKIDSLSAEKTSK 501
>Z92847-3|CAB07422.2| 323|Caenorhabditis elegans Hypothetical
protein H01G02.2 protein.
Length = 323
Score = 27.1 bits (57), Expect = 5.0
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Frame = +2
Query: 122 PKEDNSLN--TLAESAKKTIE--ELREKVESALAPETVKKNFGTMVDSFNEFYKNLKPAE 289
P EDN N T+ ++ K E E R L + + NF + S +F+K LK +E
Sbjct: 224 PNEDNWPNWRTMPDANKLLFEPKEPRNNWTEILLCKEISNNFTEFLGSHLQFFKRLKASE 283
Query: 290 APK 298
K
Sbjct: 284 LLK 286
>U39652-2|AAA80404.1| 817|Caenorhabditis elegans Hypothetical
protein R07E4.5 protein.
Length = 817
Score = 27.1 bits (57), Expect = 5.0
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +2
Query: 149 LAESAKKTIEELREKVESALAPE 217
L E A K +EE ++K++SA APE
Sbjct: 436 LEEHAVKKLEEEKDKLQSAAAPE 458
>U00052-7|AAK21422.2| 232|Caenorhabditis elegans Fatty acid/retinol
binding proteinprotein 8 protein.
Length = 232
Score = 27.1 bits (57), Expect = 5.0
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Frame = +2
Query: 134 NSLNTLAESAKKTIEELRE--KVESALAPETVKKNFGTMVDSFNEFYKNLKPAEAPKA*E 307
N+ + AK +++ E K+E A PE VK ++++ NLKP + K E
Sbjct: 156 NNAKSAVSGAKALLQDDSEAAKIEEAF-PEAVKLLNSKKFEAYSIIVNNLKPLDCVKDRE 214
Query: 308 VIF 316
+F
Sbjct: 215 QVF 217
>Z99282-1|CAB16532.1| 1037|Caenorhabditis elegans Hypothetical
protein Y70C5A.2 protein.
Length = 1037
Score = 26.6 bits (56), Expect = 6.7
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = -2
Query: 359 IITFDIFGVMYLDTKKLLLRLSVLPRASDFYKIR 258
+ITF IF + YL +L+LS + + F+KI+
Sbjct: 177 LITFLIFSIGYLSGAYHILKLSKMKISKKFWKIQ 210
>Z81109-2|CAB03244.1| 408|Caenorhabditis elegans Hypothetical
protein R10D12.2 protein.
Length = 408
Score = 26.6 bits (56), Expect = 6.7
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = -3
Query: 133 VFFRSIWFDECMHIGEADSQQDNQQLVHFGYLRTSSRI 20
V F ++W D A +QD Q LVH G R+
Sbjct: 248 VKFANLWLDALWDELHAKDKQDKQNLVHCGEFADYDRL 285
>Z46242-3|CAA86338.2| 680|Caenorhabditis elegans Hypothetical
protein F35G12.4b protein.
Length = 680
Score = 26.6 bits (56), Expect = 6.7
Identities = 19/63 (30%), Positives = 26/63 (41%)
Frame = +2
Query: 14 VADS*RRSQISKMNKXXXXXXXXXXXNVHAFVKPDAPKEDNSLNTLAESAKKTIEELREK 193
V D+ R+Q+ K NK H P PK+D T KK +E + EK
Sbjct: 571 VIDAIERNQLPKFNKMPFYLLP------HPSTNPKQPKKDRLSATEMLQVKKVMEHVYEK 624
Query: 194 VES 202
+ S
Sbjct: 625 ILS 627
>Z46242-2|CAA86335.2| 683|Caenorhabditis elegans Hypothetical
protein F35G12.4a protein.
Length = 683
Score = 26.6 bits (56), Expect = 6.7
Identities = 19/63 (30%), Positives = 26/63 (41%)
Frame = +2
Query: 14 VADS*RRSQISKMNKXXXXXXXXXXXNVHAFVKPDAPKEDNSLNTLAESAKKTIEELREK 193
V D+ R+Q+ K NK H P PK+D T KK +E + EK
Sbjct: 571 VIDAIERNQLPKFNKMPFYLLP------HPSTNPKQPKKDRLSATEMLQVKKVMEHVYEK 624
Query: 194 VES 202
+ S
Sbjct: 625 ILS 627
>U23168-4|AAU87833.1| 1379|Caenorhabditis elegans Temporarily
assigned gene nameprotein 308, isoform d protein.
Length = 1379
Score = 26.6 bits (56), Expect = 6.7
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +2
Query: 116 DAPKEDNSLNTLAESAKKTIEELREKVESALA 211
D P N + LAE +KK + +LRE ES A
Sbjct: 696 DVPDFVNKKDYLAEVSKKLLSDLREDSESVSA 727
>U23168-3|AAU87831.1| 4034|Caenorhabditis elegans Temporarily
assigned gene nameprotein 308, isoform b protein.
Length = 4034
Score = 26.6 bits (56), Expect = 6.7
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +2
Query: 116 DAPKEDNSLNTLAESAKKTIEELREKVESALA 211
D P N + LAE +KK + +LRE ES A
Sbjct: 696 DVPDFVNKKDYLAEVSKKLLSDLREDSESVSA 727
>U23168-2|AAC38806.2| 1633|Caenorhabditis elegans Temporarily
assigned gene nameprotein 308, isoform a protein.
Length = 1633
Score = 26.6 bits (56), Expect = 6.7
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +2
Query: 116 DAPKEDNSLNTLAESAKKTIEELREKVESALA 211
D P N + LAE +KK + +LRE ES A
Sbjct: 696 DVPDFVNKKDYLAEVSKKLLSDLREDSESVSA 727
>U23168-1|AAU87832.1| 7548|Caenorhabditis elegans Temporarily
assigned gene nameprotein 308, isoform c protein.
Length = 7548
Score = 26.6 bits (56), Expect = 6.7
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +2
Query: 116 DAPKEDNSLNTLAESAKKTIEELREKVESALA 211
D P N + LAE +KK + +LRE ES A
Sbjct: 696 DVPDFVNKKDYLAEVSKKLLSDLREDSESVSA 727
>AL033514-34|CAA22113.1| 463|Caenorhabditis elegans Hypothetical
protein Y75B8A.35b protein.
Length = 463
Score = 26.6 bits (56), Expect = 6.7
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +2
Query: 143 NTLAESAKKTIEELREKVESALAPETVKKN 232
N E K+T+E LREKV+ A +++N
Sbjct: 285 NNSKEELKQTLEMLREKVQEAKRQNEMQEN 314
>AL033514-33|CAB54500.1| 480|Caenorhabditis elegans Hypothetical
protein Y75B8A.35a protein.
Length = 480
Score = 26.6 bits (56), Expect = 6.7
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +2
Query: 143 NTLAESAKKTIEELREKVESALAPETVKKN 232
N E K+T+E LREKV+ A +++N
Sbjct: 302 NNSKEELKQTLEMLREKVQEAKRQNEMQEN 331
>AF160493-1|AAD43348.1| 465|Caenorhabditis elegans DNA-binding
protein ZIP-1 protein.
Length = 465
Score = 26.6 bits (56), Expect = 6.7
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +2
Query: 143 NTLAESAKKTIEELREKVESALAPETVKKN 232
N E K+T+E LREKV+ A +++N
Sbjct: 302 NNSKEELKQTLEMLREKVQEAKRQNEMQEN 331
>AF160492-1|AAD43347.1| 463|Caenorhabditis elegans DNA-binding
protein ZIP-1 protein.
Length = 463
Score = 26.6 bits (56), Expect = 6.7
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +2
Query: 143 NTLAESAKKTIEELREKVESALAPETVKKN 232
N E K+T+E LREKV+ A +++N
Sbjct: 285 NNSKEELKQTLEMLREKVQEAKRQNEMQEN 314
>Z73898-3|CAC42390.2| 606|Caenorhabditis elegans Hypothetical
protein ZK822.3c protein.
Length = 606
Score = 26.2 bits (55), Expect = 8.8
Identities = 7/25 (28%), Positives = 16/25 (64%)
Frame = -2
Query: 401 FFFHRKLLFNNVENIITFDIFGVMY 327
+F + LF N ++++ F +FG ++
Sbjct: 54 YFMPNRALFENFDSVLVFSVFGTIW 78
>Z73898-2|CAC42388.1| 667|Caenorhabditis elegans Hypothetical
protein ZK822.3b protein.
Length = 667
Score = 26.2 bits (55), Expect = 8.8
Identities = 7/25 (28%), Positives = 16/25 (64%)
Frame = -2
Query: 401 FFFHRKLLFNNVENIITFDIFGVMY 327
+F + LF N ++++ F +FG ++
Sbjct: 114 YFMPNRALFENFDSVLVFSVFGTIW 138
>Z73898-1|CAC42389.1| 647|Caenorhabditis elegans Hypothetical
protein ZK822.3a protein.
Length = 647
Score = 26.2 bits (55), Expect = 8.8
Identities = 7/25 (28%), Positives = 16/25 (64%)
Frame = -2
Query: 401 FFFHRKLLFNNVENIITFDIFGVMY 327
+F + LF N ++++ F +FG ++
Sbjct: 94 YFMPNRALFENFDSVLVFSVFGTIW 118
>Z19157-1|CAB63418.2| 733|Caenorhabditis elegans Hypothetical
protein ZC84.2 protein.
Length = 733
Score = 26.2 bits (55), Expect = 8.8
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +2
Query: 125 KEDNSLNTLAESAKKTIEELREKVESAL 208
K+DN L+ A +KT+EE+ E + +A+
Sbjct: 618 KKDNLLDENAPEEQKTVEEIAEHLNNAV 645
>M23064-1|AAA27892.1| 609|Caenorhabditis elegans Na+/H+ antiporter
protein.
Length = 609
Score = 26.2 bits (55), Expect = 8.8
Identities = 7/25 (28%), Positives = 16/25 (64%)
Frame = -2
Query: 401 FFFHRKLLFNNVENIITFDIFGVMY 327
+F + LF N ++++ F +FG ++
Sbjct: 58 YFMPNRALFENFDSVLVFSVFGTIW 82
>D86922-1|BAA13180.1| 733|Caenorhabditis elegans cyclic
nucleotide-gated channel protein.
Length = 733
Score = 26.2 bits (55), Expect = 8.8
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +2
Query: 125 KEDNSLNTLAESAKKTIEELREKVESAL 208
K+DN L+ A +KT+EE+ E + +A+
Sbjct: 618 KKDNLLDENAPEEQKTVEEIAEHLNNAV 645
>AF497835-1|AAM18113.1| 647|Caenorhabditis elegans putative Na-H
exchanger isoform 9b protein.
Length = 647
Score = 26.2 bits (55), Expect = 8.8
Identities = 7/25 (28%), Positives = 16/25 (64%)
Frame = -2
Query: 401 FFFHRKLLFNNVENIITFDIFGVMY 327
+F + LF N ++++ F +FG ++
Sbjct: 94 YFMPNRALFENFDSVLVFSVFGTIW 118
>AF497834-1|AAM18112.1| 667|Caenorhabditis elegans putative Na-H
exchanger isoform 9a protein.
Length = 667
Score = 26.2 bits (55), Expect = 8.8
Identities = 7/25 (28%), Positives = 16/25 (64%)
Frame = -2
Query: 401 FFFHRKLLFNNVENIITFDIFGVMY 327
+F + LF N ++++ F +FG ++
Sbjct: 114 YFMPNRALFENFDSVLVFSVFGTIW 138
>AF067211-16|AAC16988.3| 399|Caenorhabditis elegans Hypothetical
protein B0205.4 protein.
Length = 399
Score = 26.2 bits (55), Expect = 8.8
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = -3
Query: 370 MSRTLLHSIYLGLCT*IL 317
++R+L HSI++GLC IL
Sbjct: 6 VTRSLYHSIFIGLCVYIL 23
>AF022985-3|AAB69970.1| 355|Caenorhabditis elegans Hypothetical
protein T15B7.11 protein.
Length = 355
Score = 26.2 bits (55), Expect = 8.8
Identities = 12/40 (30%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = -3
Query: 337 GLCT*ILKNYFSGFRCF--RGLQIFIKFVEAVYHRAKVFL 224
GL ++NY + F LQ+F+ ++ V+H + +FL
Sbjct: 92 GLMQLFIRNYSDQYMLFITAYLQLFVDYLAVVFHASSLFL 131
>AC024793-1|AAF60692.2| 649|Caenorhabditis elegans Atm (ataxia
telangectasia mutated)family protein 1 protein.
Length = 649
Score = 26.2 bits (55), Expect = 8.8
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +2
Query: 98 HAFVKPDAPKEDNSLNTLAESA 163
H F K D K DNSLN+ A A
Sbjct: 78 HQFEKNDLEKVDNSLNSAARKA 99
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,961,968
Number of Sequences: 27780
Number of extensions: 175974
Number of successful extensions: 555
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 549
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 555
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 630384202
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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