Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner13c19f
         (620 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT004475-1|AAO42639.1|  154|Drosophila melanogaster RH49324p pro...   156   2e-38
AY070965-1|AAL48587.1|  120|Drosophila melanogaster RE06394p pro...   154   8e-38
AE014134-1112|AAF52402.1|  120|Drosophila melanogaster CG11015-P...   154   8e-38
BT022655-1|AAY55071.1|  154|Drosophila melanogaster IP07710p pro...    89   6e-18
AE014134-1113|AAF52403.1|  154|Drosophila melanogaster CG11043-P...    89   6e-18
AY119167-1|AAM51027.1|  154|Drosophila melanogaster RH29859p pro...    28   8.9  
AL021106-2|CAB41707.1|  217|Drosophila melanogaster EG:63B12.13 ...    28   8.9  
AE014298-270|AAO41632.1|  154|Drosophila melanogaster CG14802-PB...    28   8.9  
AE014298-269|AAF45675.3|  217|Drosophila melanogaster CG14802-PA...    28   8.9  

>BT004475-1|AAO42639.1|  154|Drosophila melanogaster RH49324p
           protein.
          Length = 154

 Score =  156 bits (379), Expect = 2e-38
 Identities = 73/121 (60%), Positives = 89/121 (73%), Gaps = 1/121 (0%)
 Frame = +2

Query: 53  TMASLW-RQILRANAFRSVILPTARRGYADKMMPDPLEHATGLERKELLALQAGNDDPFN 229
           TMAS+  R  LRA A ++V     R     KMM DPLEHATG+E++ELL   AGND+PF+
Sbjct: 34  TMASICGRMALRAAARQNVAYTPVR---FCKMMNDPLEHATGIEKRELLLKAAGNDNPFD 90

Query: 230 MKVVKKSAGTRENPTLVPSCFDARIVGCICEEHATAITWLWLHKDQPRRCECGHWYKLIE 409
           MKV K+ AGT+ENP L+PS FDARIVGCICEE  T + W+WL K   +RCECGHW+KL+E
Sbjct: 91  MKVFKRGAGTKENPNLIPSAFDARIVGCICEEDQTYVQWMWLQKGNQKRCECGHWFKLVE 150

Query: 410 K 412
           K
Sbjct: 151 K 151


>AY070965-1|AAL48587.1|  120|Drosophila melanogaster RE06394p
           protein.
          Length = 120

 Score =  154 bits (374), Expect = 8e-38
 Identities = 72/120 (60%), Positives = 88/120 (73%), Gaps = 1/120 (0%)
 Frame = +2

Query: 56  MASLW-RQILRANAFRSVILPTARRGYADKMMPDPLEHATGLERKELLALQAGNDDPFNM 232
           MAS+  R  LRA A ++V     R     KMM DPLEHATG+E++ELL   AGND+PF+M
Sbjct: 1   MASICGRMALRAAARQNVAYTPVR---FCKMMNDPLEHATGIEKRELLLKAAGNDNPFDM 57

Query: 233 KVVKKSAGTRENPTLVPSCFDARIVGCICEEHATAITWLWLHKDQPRRCECGHWYKLIEK 412
           KV K+ AGT+ENP L+PS FDARIVGCICEE  T + W+WL K   +RCECGHW+KL+EK
Sbjct: 58  KVFKRGAGTKENPNLIPSAFDARIVGCICEEDQTYVQWMWLQKGNQKRCECGHWFKLVEK 117


>AE014134-1112|AAF52402.1|  120|Drosophila melanogaster CG11015-PA
           protein.
          Length = 120

 Score =  154 bits (374), Expect = 8e-38
 Identities = 72/120 (60%), Positives = 88/120 (73%), Gaps = 1/120 (0%)
 Frame = +2

Query: 56  MASLW-RQILRANAFRSVILPTARRGYADKMMPDPLEHATGLERKELLALQAGNDDPFNM 232
           MAS+  R  LRA A ++V     R     KMM DPLEHATG+E++ELL   AGND+PF+M
Sbjct: 1   MASICGRMALRAAARQNVAYTPVR---FCKMMNDPLEHATGIEKRELLLKAAGNDNPFDM 57

Query: 233 KVVKKSAGTRENPTLVPSCFDARIVGCICEEHATAITWLWLHKDQPRRCECGHWYKLIEK 412
           KV K+ AGT+ENP L+PS FDARIVGCICEE  T + W+WL K   +RCECGHW+KL+EK
Sbjct: 58  KVFKRGAGTKENPNLIPSAFDARIVGCICEEDQTYVQWMWLQKGNQKRCECGHWFKLVEK 117


>BT022655-1|AAY55071.1|  154|Drosophila melanogaster IP07710p
           protein.
          Length = 154

 Score = 88.6 bits (210), Expect = 6e-18
 Identities = 36/84 (42%), Positives = 59/84 (70%), Gaps = 2/84 (2%)
 Frame = +2

Query: 170 TGLERKELLALQAGNDDPFNM-KVVKKSAGTRENPTLVPSCFDARIVGCICEEHATAITW 346
           TG++++E+L  + G +DP+   KV+++ +G   +PT+VPS FDAR+VGC+C +      W
Sbjct: 70  TGIQKREMLLAKQGCEDPWGFSKVIRRGSGRENDPTVVPSAFDARLVGCLCLDDRLP-KW 128

Query: 347 LWLHKDQ-PRRCECGHWYKLIEKP 415
           +W+ KD+ P+RCECGH++ L   P
Sbjct: 129 MWIEKDEGPKRCECGHYFILKNVP 152


>AE014134-1113|AAF52403.1|  154|Drosophila melanogaster CG11043-PA
           protein.
          Length = 154

 Score = 88.6 bits (210), Expect = 6e-18
 Identities = 36/84 (42%), Positives = 59/84 (70%), Gaps = 2/84 (2%)
 Frame = +2

Query: 170 TGLERKELLALQAGNDDPFNM-KVVKKSAGTRENPTLVPSCFDARIVGCICEEHATAITW 346
           TG++++E+L  + G +DP+   KV+++ +G   +PT+VPS FDAR+VGC+C +      W
Sbjct: 70  TGIQKREMLLAKQGCEDPWGFSKVIRRGSGRENDPTVVPSAFDARLVGCLCLDDRLP-KW 128

Query: 347 LWLHKDQ-PRRCECGHWYKLIEKP 415
           +W+ KD+ P+RCECGH++ L   P
Sbjct: 129 MWIEKDEGPKRCECGHYFILKNVP 152


>AY119167-1|AAM51027.1|  154|Drosophila melanogaster RH29859p
           protein.
          Length = 154

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 14/38 (36%), Positives = 16/38 (42%)
 Frame = +2

Query: 209 GNDDPFNMKVVKKSAGTRENPTLVPSCFDARIVGCICE 322
           G D PF M+ +         PTLV SC D      I E
Sbjct: 21  GRDAPFQMRYLGNPEVDLRRPTLVRSCMDCACTNGILE 58


>AL021106-2|CAB41707.1|  217|Drosophila melanogaster EG:63B12.13
           protein.
          Length = 217

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 14/38 (36%), Positives = 16/38 (42%)
 Frame = +2

Query: 209 GNDDPFNMKVVKKSAGTRENPTLVPSCFDARIVGCICE 322
           G D PF M+ +         PTLV SC D      I E
Sbjct: 84  GRDAPFQMRYLGNPEVDLRRPTLVRSCMDCACTNGILE 121


>AE014298-270|AAO41632.1|  154|Drosophila melanogaster CG14802-PB,
           isoform B protein.
          Length = 154

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 14/38 (36%), Positives = 16/38 (42%)
 Frame = +2

Query: 209 GNDDPFNMKVVKKSAGTRENPTLVPSCFDARIVGCICE 322
           G D PF M+ +         PTLV SC D      I E
Sbjct: 21  GRDAPFQMRYLGNPEVDLRRPTLVRSCMDCACTNGILE 58


>AE014298-269|AAF45675.3|  217|Drosophila melanogaster CG14802-PA,
           isoform A protein.
          Length = 217

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 14/38 (36%), Positives = 16/38 (42%)
 Frame = +2

Query: 209 GNDDPFNMKVVKKSAGTRENPTLVPSCFDARIVGCICE 322
           G D PF M+ +         PTLV SC D      I E
Sbjct: 84  GRDAPFQMRYLGNPEVDLRRPTLVRSCMDCACTNGILE 121


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,833,477
Number of Sequences: 53049
Number of extensions: 689771
Number of successful extensions: 1537
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1458
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1533
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2559155400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)