Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner13c16f
         (596 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.    23   1.7  
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    23   1.7  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    23   2.3  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    22   5.3  
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    21   6.9  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          21   9.2  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      21   9.2  

>EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.
          Length = 200

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 12/49 (24%), Positives = 24/49 (48%)
 Frame = +1

Query: 343 QNLIKNPCSQACSCRISDGEPQFDCAAVDCVESFDSDLQECVKTYELDS 489
           ++L+K   S+    ++   +  FD   +DC++S   +L   V  Y  D+
Sbjct: 7   KSLLKKYLSKDVFDQLKTKKTSFDSTLLDCIQSGIENLDSGVGIYAPDA 55


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 12/49 (24%), Positives = 24/49 (48%)
 Frame = +1

Query: 343 QNLIKNPCSQACSCRISDGEPQFDCAAVDCVESFDSDLQECVKTYELDS 489
           ++L+K   S+    ++   +  FD   +DC++S   +L   V  Y  D+
Sbjct: 23  KSLLKKYLSKDVFDQLKTKKTSFDSTLLDCIQSGIENLDSGVGIYAPDA 71


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = -1

Query: 590 GSKISPSLYVLPSTWQVFNAAIAS 519
           GS   P L +L   W+++NAA+++
Sbjct: 254 GSFYIPMLVMLFFYWRIYNAAVST 277


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 12/46 (26%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
 Frame = +1

Query: 313 ASYTDRSPL--PQNLIKNPCSQACSCRISDGEPQFDCAAVDCVESF 444
           A+Y D + +  PQN  +N    A    + +  P+F    + C+  F
Sbjct: 169 ATYVDINYVEYPQNSKRNSEESAICAMLKENMPEFPLYQLSCILFF 214


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +3

Query: 27  VDASLVNNIPPDA*SLLKLFDLK 95
           +D+ LVNN  P     L  FDLK
Sbjct: 144 LDSGLVNNNQPMCSPKLLTFDLK 166


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -1

Query: 392 EMRQLHAWEHGFLIKFWGK 336
           EMR + A + G+LI  +GK
Sbjct: 333 EMRLMDAIDSGYLIDEYGK 351


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -1

Query: 392 EMRQLHAWEHGFLIKFWGK 336
           EMR + A + G+LI  +GK
Sbjct: 333 EMRLMDAIDSGYLIDEYGK 351


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,608
Number of Sequences: 438
Number of extensions: 3800
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17482179
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)