Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner13b21f
         (316 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT029096-1|ABJ17029.1|  341|Drosophila melanogaster IP13327p pro...    28   2.2  
AE014134-1095|AAF52385.2|  433|Drosophila melanogaster CG16947-P...    28   2.2  

>BT029096-1|ABJ17029.1|  341|Drosophila melanogaster IP13327p
           protein.
          Length = 341

 Score = 28.3 bits (60), Expect = 2.2
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = -3

Query: 113 LDKMCFRNSLISNHFNVPSARLNFYSLMTVFVLAD 9
           L KMCF   L S H+  P+ + +   +  ++V  D
Sbjct: 242 LHKMCFDQLLASGHYTCPTCQTSLIDMTALWVYLD 276


>AE014134-1095|AAF52385.2|  433|Drosophila melanogaster CG16947-PA
           protein.
          Length = 433

 Score = 28.3 bits (60), Expect = 2.2
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = -3

Query: 113 LDKMCFRNSLISNHFNVPSARLNFYSLMTVFVLAD 9
           L KMCF   L S H+  P+ + +   +  ++V  D
Sbjct: 334 LHKMCFDQLLASGHYTCPTCQTSLIDMTALWVYLD 368


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,795,537
Number of Sequences: 53049
Number of extensions: 161332
Number of successful extensions: 232
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 230
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 232
length of database: 24,988,368
effective HSP length: 74
effective length of database: 21,062,742
effective search space used: 631882260
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)