Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner13b21f
         (316 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    23   0.66 
DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    22   1.5  
DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.               21   4.7  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    21   4.7  
DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chlor...    20   6.2  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    20   6.2  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          20   8.1  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      20   8.1  

>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 23.4 bits (48), Expect = 0.66
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -3

Query: 161 LFIKKNIVKIGNLIIRLDKMCFRN 90
           LF+   +   GN I  +D + FRN
Sbjct: 406 LFVLNRLTLSGNAIASIDPLAFRN 429


>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 22.2 bits (45), Expect = 1.5
 Identities = 11/42 (26%), Positives = 26/42 (61%)
 Frame = +2

Query: 131 LFLQCFF**ITSCFNIIKSRSIILNDNGIVYPSSLNNLLLIM 256
           +F+   F  IT+C  IIK+ ++    N  ++  ++++L+L++
Sbjct: 50  IFVTGIFGNITTCTVIIKNPAMQTATNYYLFSLAISDLILLV 91


>DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.
          Length = 132

 Score = 20.6 bits (41), Expect = 4.7
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = -2

Query: 312 FFNYKTYFINVIYYIALY 259
           F NY  +FI VI  I LY
Sbjct: 2   FKNYHFFFILVITLIFLY 19


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 20.6 bits (41), Expect = 4.7
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +1

Query: 139 TMFFLINNFLFQY 177
           T F LIN F+F Y
Sbjct: 14  TSFILINYFIFLY 26


>DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 383

 Score = 20.2 bits (40), Expect = 6.2
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = -2

Query: 315 FFFNYKTYFINVIYY 271
           FFF +    +NV+Y+
Sbjct: 365 FFFPFSFLILNVVYW 379


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 20.2 bits (40), Expect = 6.2
 Identities = 11/39 (28%), Positives = 18/39 (46%)
 Frame = -2

Query: 270 IALYDIINNKLFNELG*TIPLSFRIMLLDLIILKQEVIY 154
           I +   I++  FN+   TIP   +I +    I +   IY
Sbjct: 372 ILMRKAISDYTFNDTKITIPKEMKIWIPAFAIHRDSAIY 410


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 19.8 bits (39), Expect = 8.1
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = -3

Query: 86  LISNHFNVPSARLNFYSLMTVFVL 15
           ++SN  N P  R  FY  +   VL
Sbjct: 243 MLSNSLNFPQIRGEFYFFLHKQVL 266


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 19.8 bits (39), Expect = 8.1
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = -3

Query: 86  LISNHFNVPSARLNFYSLMTVFVL 15
           ++SN  N P  R  FY  +   VL
Sbjct: 243 MLSNSLNFPQIRGEFYFFLHKQVL 266


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,129
Number of Sequences: 438
Number of extensions: 1349
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  6719922
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)