Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner13a11r
(311 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY024361-1|AAK00583.1| 4911|Homo sapiens MLL3 protein. 29 2.2
AF007192-1|AAC02270.1| 338|Homo sapiens intestinal mucin protein. 29 2.2
AB040939-1|BAA96030.2| 3310|Homo sapiens KIAA1506 protein protein. 29 2.2
AL136170-3|CAI19419.1| 1086|Homo sapiens ring finger and CCCH-ty... 29 2.9
AL136170-2|CAI19417.1| 1094|Homo sapiens ring finger and CCCH-ty... 29 2.9
AL136170-1|CAI19418.1| 1133|Homo sapiens ring finger and CCCH-ty... 29 2.9
AL121983-3|CAH70710.1| 1086|Homo sapiens ring finger and CCCH-ty... 29 2.9
AL121983-2|CAH70709.1| 1094|Homo sapiens ring finger and CCCH-ty... 29 2.9
AL121983-1|CAI12318.1| 1133|Homo sapiens ring finger and CCCH-ty... 29 2.9
AB095945-1|BAC23121.1| 1109|Homo sapiens KIAA2025 protein protein. 29 2.9
AF043724-1|AAC39862.1| 359|Homo sapiens hepatitis A virus cellu... 28 5.0
BC111545-1|AAI11546.1| 569|Homo sapiens mex-3 homolog B (C. ele... 28 6.7
BC036211-1|AAH36211.1| 569|Homo sapiens MEX3B protein protein. 28 6.7
AY950678-1|AAY34146.1| 569|Homo sapiens MEX3B protein. 28 6.7
AL136778-1|CAB66712.2| 266|Homo sapiens hypothetical protein pr... 28 6.7
AK131424-1|BAD18571.1| 569|Homo sapiens protein ( Homo sapiens ... 28 6.7
AF007191-1|AAC02269.1| 589|Homo sapiens intestinal mucin protein. 28 6.7
AB095929-1|BAC23105.1| 501|Homo sapiens KIAA2009 protein protein. 28 6.7
U80746-1|AAB91444.1| 358|Homo sapiens CAGH4 protein. 27 8.8
U70136-1|AAB09089.1| 1404|Homo sapiens megakaryocyte stimulating... 27 8.8
J04543-1|AAA36616.1| 466|Homo sapiens protein ( Human synexin m... 27 8.8
CR407686-1|CAG28614.1| 466|Homo sapiens ANXA7 protein. 27 8.8
BT007187-1|AAP35851.1| 466|Homo sapiens annexin A7 protein. 27 8.8
BC104758-1|AAI04759.1| 465|Homo sapiens trinucleotide repeat co... 27 8.8
BC068008-1|AAH68008.1| 407|Homo sapiens TNRC4 protein protein. 27 8.8
BC002632-1|AAH02632.1| 466|Homo sapiens annexin A7 protein. 27 8.8
AL589765-5|CAI17168.1| 465|Homo sapiens trinucleotide repeat co... 27 8.8
AL589765-3|CAI17166.1| 465|Homo sapiens trinucleotide repeat co... 27 8.8
AL512656-2|CAI15291.1| 466|Homo sapiens annexin A7 protein. 27 8.8
AL512656-1|CAI15290.1| 488|Homo sapiens annexin A7 protein. 27 8.8
AL353731-4|CAI52485.1| 466|Homo sapiens annexin A7 protein. 27 8.8
AL353731-3|CAI52484.1| 488|Homo sapiens annexin A7 protein. 27 8.8
AL353731-2|CAI52483.1| 144|Homo sapiens annexin A7 protein. 27 8.8
AL133553-1|CAC36090.1| 1404|Homo sapiens proteoglycan 4 protein. 27 8.8
AK222552-1|BAD96272.1| 466|Homo sapiens annexin VII isoform 1 v... 27 8.8
AK131434-1|BAD18580.1| 933|Homo sapiens protein ( Homo sapiens ... 27 8.8
AB209264-1|BAD92501.1| 441|Homo sapiens trinucleotide repeat co... 27 8.8
AB062429-1|BAB93492.1| 466|Homo sapiens annexin A7 protein. 27 8.8
>AY024361-1|AAK00583.1| 4911|Homo sapiens MLL3 protein.
Length = 4911
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/60 (25%), Positives = 25/60 (41%)
Frame = -3
Query: 234 GNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQGRPYFKPTPLPWCSRWEVK 55
G G I R + P+ + + + ++ D +GR FKP LP + W +K
Sbjct: 824 GMGKPAITKRKFSPGRPRSKQGAWSTHNTVSPPSWSPDISEGREIFKPRQLPGSAIWSIK 883
>AF007192-1|AAC02270.1| 338|Homo sapiens intestinal mucin protein.
Length = 338
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/54 (29%), Positives = 24/54 (44%)
Frame = -1
Query: 248 WPTLKETATNLLTTARTSLILPKITTLMETATNLSTTVHITWTLPKADLTSSLP 87
WPT T ++L T +S +P TN++ + TLP +T S P
Sbjct: 179 WPTATNTLSSLTTNILSSTPVPSTERTTSHTTNINPVSTLVTTLP-TTITRSTP 231
>AB040939-1|BAA96030.2| 3310|Homo sapiens KIAA1506 protein protein.
Length = 3310
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/60 (25%), Positives = 25/60 (41%)
Frame = -3
Query: 234 GNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQGRPYFKPTPLPWCSRWEVK 55
G G I R + P+ + + + ++ D +GR FKP LP + W +K
Sbjct: 269 GMGKPAITKRKFSPGRPRSKQGAWSTHNTVSPPSWSPDISEGREIFKPRQLPGSAIWSIK 328
>AL136170-3|CAI19419.1| 1086|Homo sapiens ring finger and CCCH-type
zinc finger domains 1 protein.
Length = 1086
Score = 29.1 bits (62), Expect = 2.9
Identities = 16/46 (34%), Positives = 18/46 (39%), Gaps = 1/46 (2%)
Frame = -3
Query: 219 PIDNRPYIVNPPKDYNPNGNGYEPIDN-GAYYVDPPQGRPYFKPTP 85
P D P V P P G+ P YY DP P F+P P
Sbjct: 523 PADLPPMPVTKPLQMVPRGSQLYPAQQTDVYYQDPRGAAPPFEPAP 568
>AL136170-2|CAI19417.1| 1094|Homo sapiens ring finger and CCCH-type
zinc finger domains 1 protein.
Length = 1094
Score = 29.1 bits (62), Expect = 2.9
Identities = 16/46 (34%), Positives = 18/46 (39%), Gaps = 1/46 (2%)
Frame = -3
Query: 219 PIDNRPYIVNPPKDYNPNGNGYEPIDN-GAYYVDPPQGRPYFKPTP 85
P D P V P P G+ P YY DP P F+P P
Sbjct: 523 PADLPPMPVTKPLQMVPRGSQLYPAQQTDVYYQDPRGAAPPFEPAP 568
>AL136170-1|CAI19418.1| 1133|Homo sapiens ring finger and CCCH-type
zinc finger domains 1 protein.
Length = 1133
Score = 29.1 bits (62), Expect = 2.9
Identities = 16/46 (34%), Positives = 18/46 (39%), Gaps = 1/46 (2%)
Frame = -3
Query: 219 PIDNRPYIVNPPKDYNPNGNGYEPIDN-GAYYVDPPQGRPYFKPTP 85
P D P V P P G+ P YY DP P F+P P
Sbjct: 562 PADLPPMPVTKPLQMVPRGSQLYPAQQTDVYYQDPRGAAPPFEPAP 607
>AL121983-3|CAH70710.1| 1086|Homo sapiens ring finger and CCCH-type
zinc finger domains 1 protein.
Length = 1086
Score = 29.1 bits (62), Expect = 2.9
Identities = 16/46 (34%), Positives = 18/46 (39%), Gaps = 1/46 (2%)
Frame = -3
Query: 219 PIDNRPYIVNPPKDYNPNGNGYEPIDN-GAYYVDPPQGRPYFKPTP 85
P D P V P P G+ P YY DP P F+P P
Sbjct: 523 PADLPPMPVTKPLQMVPRGSQLYPAQQTDVYYQDPRGAAPPFEPAP 568
>AL121983-2|CAH70709.1| 1094|Homo sapiens ring finger and CCCH-type
zinc finger domains 1 protein.
Length = 1094
Score = 29.1 bits (62), Expect = 2.9
Identities = 16/46 (34%), Positives = 18/46 (39%), Gaps = 1/46 (2%)
Frame = -3
Query: 219 PIDNRPYIVNPPKDYNPNGNGYEPIDN-GAYYVDPPQGRPYFKPTP 85
P D P V P P G+ P YY DP P F+P P
Sbjct: 523 PADLPPMPVTKPLQMVPRGSQLYPAQQTDVYYQDPRGAAPPFEPAP 568
>AL121983-1|CAI12318.1| 1133|Homo sapiens ring finger and CCCH-type
zinc finger domains 1 protein.
Length = 1133
Score = 29.1 bits (62), Expect = 2.9
Identities = 16/46 (34%), Positives = 18/46 (39%), Gaps = 1/46 (2%)
Frame = -3
Query: 219 PIDNRPYIVNPPKDYNPNGNGYEPIDN-GAYYVDPPQGRPYFKPTP 85
P D P V P P G+ P YY DP P F+P P
Sbjct: 562 PADLPPMPVTKPLQMVPRGSQLYPAQQTDVYYQDPRGAAPPFEPAP 607
>AB095945-1|BAC23121.1| 1109|Homo sapiens KIAA2025 protein protein.
Length = 1109
Score = 29.1 bits (62), Expect = 2.9
Identities = 16/46 (34%), Positives = 18/46 (39%), Gaps = 1/46 (2%)
Frame = -3
Query: 219 PIDNRPYIVNPPKDYNPNGNGYEPIDN-GAYYVDPPQGRPYFKPTP 85
P D P V P P G+ P YY DP P F+P P
Sbjct: 538 PADLPPMPVTKPLQMVPRGSQLYPAQQTDVYYQDPRGAAPPFEPAP 583
>AF043724-1|AAC39862.1| 359|Homo sapiens hepatitis A virus cellular
receptor 1 protein.
Length = 359
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/51 (29%), Positives = 23/51 (45%)
Frame = -1
Query: 230 TATNLLTTARTSLILPKITTLMETATNLSTTVHITWTLPKADLTSSLPLYP 78
T +TT RTS +P TT+ T + ++ T T+P S+ P
Sbjct: 136 TTVPTVTTVRTSTTVPTTTTVPTTTVPTTMSIPTTTTVPTTMTVSTTTSVP 186
>BC111545-1|AAI11546.1| 569|Homo sapiens mex-3 homolog B (C.
elegans) protein.
Length = 569
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = -3
Query: 174 NPNGNGYEPIDNGAYYVDPPQGRPYFKPT 88
N NGNGY G V P G P +PT
Sbjct: 334 NNNGNGYTYTAGGEASVPSPDGCPELQPT 362
>BC036211-1|AAH36211.1| 569|Homo sapiens MEX3B protein protein.
Length = 569
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = -3
Query: 174 NPNGNGYEPIDNGAYYVDPPQGRPYFKPT 88
N NGNGY G V P G P +PT
Sbjct: 334 NNNGNGYTYTAGGEASVPSPDGCPELQPT 362
>AY950678-1|AAY34146.1| 569|Homo sapiens MEX3B protein.
Length = 569
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = -3
Query: 174 NPNGNGYEPIDNGAYYVDPPQGRPYFKPT 88
N NGNGY G V P G P +PT
Sbjct: 334 NNNGNGYTYTAGGEASVPSPDGCPELQPT 362
>AL136778-1|CAB66712.2| 266|Homo sapiens hypothetical protein
protein.
Length = 266
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = -3
Query: 174 NPNGNGYEPIDNGAYYVDPPQGRPYFKPT 88
N NGNGY G V P G P +PT
Sbjct: 31 NNNGNGYTYTAGGEASVPSPDGCPELQPT 59
>AK131424-1|BAD18571.1| 569|Homo sapiens protein ( Homo sapiens
cDNA FLJ16544 fis, clone OCBBF3003761. ).
Length = 569
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = -3
Query: 174 NPNGNGYEPIDNGAYYVDPPQGRPYFKPT 88
N NGNGY G V P G P +PT
Sbjct: 334 NNNGNGYTYTAGGEASVPSPDGCPELQPT 362
>AF007191-1|AAC02269.1| 589|Homo sapiens intestinal mucin protein.
Length = 589
Score = 27.9 bits (59), Expect = 6.7
Identities = 15/53 (28%), Positives = 27/53 (50%)
Frame = -1
Query: 245 PTLKETATNLLTTARTSLILPKITTLMETATNLSTTVHITWTLPKADLTSSLP 87
PT T ++L ++ +S ++P + TNL+ + + TLP +T S P
Sbjct: 400 PTANSTLSSLTSSILSSTLVPSTDMITSHTTNLTRSSPLLATLP-TTITRSTP 451
>AB095929-1|BAC23105.1| 501|Homo sapiens KIAA2009 protein protein.
Length = 501
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = -3
Query: 174 NPNGNGYEPIDNGAYYVDPPQGRPYFKPT 88
N NGNGY G V P G P +PT
Sbjct: 266 NNNGNGYTYTAGGEASVPSPDGCPELQPT 294
>U80746-1|AAB91444.1| 358|Homo sapiens CAGH4 protein.
Length = 358
Score = 27.5 bits (58), Expect = 8.8
Identities = 15/40 (37%), Positives = 18/40 (45%)
Frame = -3
Query: 231 NGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQ 112
NGY P+ +P P PNG P + A VDP Q
Sbjct: 173 NGYSPVPTQPTGQPAPDALYPNGVHPYPAQSPAAPVDPLQ 212
>U70136-1|AAB09089.1| 1404|Homo sapiens megakaryocyte stimulating
factor protein.
Length = 1404
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = -1
Query: 242 TLKETATNLLTTARTSLILPKITTLMETAT 153
T ++T +TT +T+ + PK+TT +T T
Sbjct: 964 TTQDTTPFKITTLKTTTLAPKVTTTKKTIT 993
>J04543-1|AAA36616.1| 466|Homo sapiens protein ( Human synexin
mRNA, complete cds. ).
Length = 466
Score = 27.5 bits (58), Expect = 8.8
Identities = 16/50 (32%), Positives = 19/50 (38%)
Frame = -3
Query: 228 GYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQGRPYFKPTPLP 79
GY P PP P +G+ P+ GAY P G P P P
Sbjct: 16 GYPPAGQESSF--PPSGQYPYPSGFPPMGGGAYPQVPSSGYPGAGGYPAP 63
>CR407686-1|CAG28614.1| 466|Homo sapiens ANXA7 protein.
Length = 466
Score = 27.5 bits (58), Expect = 8.8
Identities = 16/50 (32%), Positives = 19/50 (38%)
Frame = -3
Query: 228 GYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQGRPYFKPTPLP 79
GY P PP P +G+ P+ GAY P G P P P
Sbjct: 16 GYPPAGQESSF--PPSGQYPYPSGFPPMGGGAYPQVPSSGYPGAGGYPAP 63
>BT007187-1|AAP35851.1| 466|Homo sapiens annexin A7 protein.
Length = 466
Score = 27.5 bits (58), Expect = 8.8
Identities = 16/50 (32%), Positives = 19/50 (38%)
Frame = -3
Query: 228 GYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQGRPYFKPTPLP 79
GY P PP P +G+ P+ GAY P G P P P
Sbjct: 16 GYPPAGQESSF--PPSGQYPYPSGFPPMGGGAYPQVPSSGYPGAGGYPAP 63
>BC104758-1|AAI04759.1| 465|Homo sapiens trinucleotide repeat
containing 4 protein.
Length = 465
Score = 27.5 bits (58), Expect = 8.8
Identities = 15/40 (37%), Positives = 18/40 (45%)
Frame = -3
Query: 231 NGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQ 112
NGY P+ +P P PNG P + A VDP Q
Sbjct: 280 NGYSPVPTQPTGQPAPDALYPNGVHPYPAQSPAAPVDPLQ 319
>BC068008-1|AAH68008.1| 407|Homo sapiens TNRC4 protein protein.
Length = 407
Score = 27.5 bits (58), Expect = 8.8
Identities = 15/40 (37%), Positives = 18/40 (45%)
Frame = -3
Query: 231 NGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQ 112
NGY P+ +P P PNG P + A VDP Q
Sbjct: 222 NGYSPVPTQPTGQPAPDALYPNGVHPYPAQSPAAPVDPLQ 261
>BC002632-1|AAH02632.1| 466|Homo sapiens annexin A7 protein.
Length = 466
Score = 27.5 bits (58), Expect = 8.8
Identities = 16/50 (32%), Positives = 19/50 (38%)
Frame = -3
Query: 228 GYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQGRPYFKPTPLP 79
GY P PP P +G+ P+ GAY P G P P P
Sbjct: 16 GYPPAGQESSF--PPSGQYPYPSGFPPMGGGAYPQVPSSGYPGAGGYPAP 63
>AL589765-5|CAI17168.1| 465|Homo sapiens trinucleotide repeat
containing 4 protein.
Length = 465
Score = 27.5 bits (58), Expect = 8.8
Identities = 15/40 (37%), Positives = 18/40 (45%)
Frame = -3
Query: 231 NGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQ 112
NGY P+ +P P PNG P + A VDP Q
Sbjct: 280 NGYSPVPTQPTGQPAPDALYPNGVHPYPAQSPAAPVDPLQ 319
>AL589765-3|CAI17166.1| 465|Homo sapiens trinucleotide repeat
containing 4 protein.
Length = 465
Score = 27.5 bits (58), Expect = 8.8
Identities = 15/40 (37%), Positives = 18/40 (45%)
Frame = -3
Query: 231 NGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQ 112
NGY P+ +P P PNG P + A VDP Q
Sbjct: 280 NGYSPVPTQPTGQPAPDALYPNGVHPYPAQSPAAPVDPLQ 319
>AL512656-2|CAI15291.1| 466|Homo sapiens annexin A7 protein.
Length = 466
Score = 27.5 bits (58), Expect = 8.8
Identities = 16/50 (32%), Positives = 19/50 (38%)
Frame = -3
Query: 228 GYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQGRPYFKPTPLP 79
GY P PP P +G+ P+ GAY P G P P P
Sbjct: 16 GYPPAGQESSF--PPSGQYPYPSGFPPMGGGAYPQVPSSGYPGAGGYPAP 63
>AL512656-1|CAI15290.1| 488|Homo sapiens annexin A7 protein.
Length = 488
Score = 27.5 bits (58), Expect = 8.8
Identities = 16/50 (32%), Positives = 19/50 (38%)
Frame = -3
Query: 228 GYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQGRPYFKPTPLP 79
GY P PP P +G+ P+ GAY P G P P P
Sbjct: 16 GYPPAGQESSF--PPSGQYPYPSGFPPMGGGAYPQVPSSGYPGAGGYPAP 63
>AL353731-4|CAI52485.1| 466|Homo sapiens annexin A7 protein.
Length = 466
Score = 27.5 bits (58), Expect = 8.8
Identities = 16/50 (32%), Positives = 19/50 (38%)
Frame = -3
Query: 228 GYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQGRPYFKPTPLP 79
GY P PP P +G+ P+ GAY P G P P P
Sbjct: 16 GYPPAGQESSF--PPSGQYPYPSGFPPMGGGAYPQVPSSGYPGAGGYPAP 63
>AL353731-3|CAI52484.1| 488|Homo sapiens annexin A7 protein.
Length = 488
Score = 27.5 bits (58), Expect = 8.8
Identities = 16/50 (32%), Positives = 19/50 (38%)
Frame = -3
Query: 228 GYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQGRPYFKPTPLP 79
GY P PP P +G+ P+ GAY P G P P P
Sbjct: 16 GYPPAGQESSF--PPSGQYPYPSGFPPMGGGAYPQVPSSGYPGAGGYPAP 63
>AL353731-2|CAI52483.1| 144|Homo sapiens annexin A7 protein.
Length = 144
Score = 27.5 bits (58), Expect = 8.8
Identities = 16/50 (32%), Positives = 19/50 (38%)
Frame = -3
Query: 228 GYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQGRPYFKPTPLP 79
GY P PP P +G+ P+ GAY P G P P P
Sbjct: 16 GYPPAGQESSF--PPSGQYPYPSGFPPMGGGAYPQVPSSGYPGAGGYPAP 63
>AL133553-1|CAC36090.1| 1404|Homo sapiens proteoglycan 4 protein.
Length = 1404
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = -1
Query: 242 TLKETATNLLTTARTSLILPKITTLMETAT 153
T ++T +TT +T+ + PK+TT +T T
Sbjct: 964 TTQDTTPFKITTLKTTTLAPKVTTTKKTIT 993
>AK222552-1|BAD96272.1| 466|Homo sapiens annexin VII isoform 1
variant protein.
Length = 466
Score = 27.5 bits (58), Expect = 8.8
Identities = 16/50 (32%), Positives = 19/50 (38%)
Frame = -3
Query: 228 GYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQGRPYFKPTPLP 79
GY P PP P +G+ P+ GAY P G P P P
Sbjct: 16 GYPPAGQESSF--PPSGQYPYPSGFPPMGGGAYPQVPSSGYPGAGGYPAP 63
>AK131434-1|BAD18580.1| 933|Homo sapiens protein ( Homo sapiens
cDNA FLJ16561 fis, clone SYNOV4003981, moderately
similar to Homo sapiens proteoglycan 4, (megakaryocyte
stimulating ).
Length = 933
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = -1
Query: 242 TLKETATNLLTTARTSLILPKITTLMETAT 153
T ++T +TT +T+ + PK+TT +T T
Sbjct: 493 TTQDTTPFKITTLKTTTLAPKVTTTKKTIT 522
>AB209264-1|BAD92501.1| 441|Homo sapiens trinucleotide repeat
containing 4 variant protein.
Length = 441
Score = 27.5 bits (58), Expect = 8.8
Identities = 15/40 (37%), Positives = 18/40 (45%)
Frame = -3
Query: 231 NGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQ 112
NGY P+ +P P PNG P + A VDP Q
Sbjct: 256 NGYSPVPTQPTGQPAPDALYPNGVHPYPAQSPAAPVDPLQ 295
>AB062429-1|BAB93492.1| 466|Homo sapiens annexin A7 protein.
Length = 466
Score = 27.5 bits (58), Expect = 8.8
Identities = 16/50 (32%), Positives = 19/50 (38%)
Frame = -3
Query: 228 GYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQGRPYFKPTPLP 79
GY P PP P +G+ P+ GAY P G P P P
Sbjct: 16 GYPPAGQESSF--PPSGQYPYPSGFPPMGGGAYPQVPSSGYPGAGGYPAP 63
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 47,893,754
Number of Sequences: 237096
Number of extensions: 1162504
Number of successful extensions: 6423
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 6269
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6413
length of database: 76,859,062
effective HSP length: 78
effective length of database: 58,365,574
effective search space used: 1459139350
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -