Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner13a10f
         (654 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-3494|AAF46919.2|  524|Drosophila melanogaster CG3682-PB...    31   1.8  
AE013599-3493|AAF46920.2|  729|Drosophila melanogaster CG3682-PA...    31   1.8  
AE013599-3492|ABI31111.1|  945|Drosophila melanogaster CG3682-PC...    31   1.8  
BT004885-1|AAO45241.1| 1710|Drosophila melanogaster GH01875p pro...    29   7.3  
AE014134-3577|AAF57250.2| 1710|Drosophila melanogaster CG6448-PB...    29   7.3  
AE014134-3576|AAF57249.2| 1710|Drosophila melanogaster CG6448-PA...    29   7.3  

>AE013599-3494|AAF46919.2|  524|Drosophila melanogaster CG3682-PB,
           isoform B protein.
          Length = 524

 Score = 30.7 bits (66), Expect = 1.8
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = -3

Query: 286 VIMPPQGYSICSYHHFSPF*YRLRDPSLLQQWVTSFG 176
           +  PP+G S+   HH+S F Y++  P   + +   FG
Sbjct: 114 ITFPPEGSSLTPAHHYSEFRYKIYAPIAFRYFRDLFG 150


>AE013599-3493|AAF46920.2|  729|Drosophila melanogaster CG3682-PA,
           isoform A protein.
          Length = 729

 Score = 30.7 bits (66), Expect = 1.8
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = -3

Query: 286 VIMPPQGYSICSYHHFSPF*YRLRDPSLLQQWVTSFG 176
           +  PP+G S+   HH+S F Y++  P   + +   FG
Sbjct: 114 ITFPPEGSSLTPAHHYSEFRYKIYAPIAFRYFRDLFG 150


>AE013599-3492|ABI31111.1|  945|Drosophila melanogaster CG3682-PC,
           isoform C protein.
          Length = 945

 Score = 30.7 bits (66), Expect = 1.8
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = -3

Query: 286 VIMPPQGYSICSYHHFSPF*YRLRDPSLLQQWVTSFG 176
           +  PP+G S+   HH+S F Y++  P   + +   FG
Sbjct: 114 ITFPPEGSSLTPAHHYSEFRYKIYAPIAFRYFRDLFG 150


>BT004885-1|AAO45241.1| 1710|Drosophila melanogaster GH01875p protein.
          Length = 1710

 Score = 28.7 bits (61), Expect = 7.3
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = +3

Query: 309  PMRA*HQDRCGNVDETIMKLIVSSHEHRVQKSKQ 410
            P++     +CG +D+TI+    S H H  Q+ +Q
Sbjct: 1126 PLKPPRSSQCGRLDDTIVSETSSGHVHSWQQQEQ 1159


>AE014134-3577|AAF57250.2| 1710|Drosophila melanogaster CG6448-PB,
            isoform B protein.
          Length = 1710

 Score = 28.7 bits (61), Expect = 7.3
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = +3

Query: 309  PMRA*HQDRCGNVDETIMKLIVSSHEHRVQKSKQ 410
            P++     +CG +D+TI+    S H H  Q+ +Q
Sbjct: 1126 PLKPPRSSQCGRLDDTIVSETSSGHVHSWQQQEQ 1159


>AE014134-3576|AAF57249.2| 1710|Drosophila melanogaster CG6448-PA,
            isoform A protein.
          Length = 1710

 Score = 28.7 bits (61), Expect = 7.3
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = +3

Query: 309  PMRA*HQDRCGNVDETIMKLIVSSHEHRVQKSKQ 410
            P++     +CG +D+TI+    S H H  Q+ +Q
Sbjct: 1126 PLKPPRSSQCGRLDDTIVSETSSGHVHSWQQQEQ 1159


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,717,914
Number of Sequences: 53049
Number of extensions: 589277
Number of successful extensions: 1151
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1139
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1151
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2786177250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)