Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner13a06f
(677 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0550 + 4044683-4044784,4044862-4044975,4045277-4045360,404... 181 4e-46
06_03_0627 + 22903346-22903523,22906010-22906152,22906235-229066... 126 2e-29
06_01_1105 + 9102059-9102167,9103770-9103907,9104125-9104267,910... 124 5e-29
01_05_0545 + 23109920-23110040,23113363-23113505,23113626-231140... 120 8e-28
02_05_0620 - 30412004-30412429,30412509-30412646,30412729-304128... 120 1e-27
04_04_0154 - 23146445-23146535,23146689-23146795,23146933-231469... 105 2e-23
01_05_0544 + 23098921-23098953,23099209-23099272,23099942-231000... 105 4e-23
07_01_0637 + 4767021-4767083,4767175-4767249,4767339-4767500,476... 94 8e-20
09_04_0272 - 16278136-16278289,16278873-16278970,16279090-162792... 88 5e-18
08_02_0717 + 20372728-20372836,20372936-20373078,20374131-203742... 82 5e-16
08_02_0811 + 21438848-21439001,21439469-21439662,21439769-214398... 79 2e-15
07_03_1752 - 29218348-29218524,29218593-29218736,29218957-292191... 51 7e-07
11_01_0550 + 4355857-4356051,4357287-4357355,4357429-4357561,435... 46 4e-05
12_01_0497 + 3946179-3946322,3947274-3947342,3948733-3948829,395... 44 9e-05
04_04_0660 - 27017692-27017928,27018101-27018250,27018337-270184... 38 0.006
05_06_0214 - 26425100-26425922,26426008-26426058,26426183-264262... 36 0.023
01_05_0195 - 19111983-19112477,19112646-19113950,19114053-191143... 34 0.091
07_03_1755 - 29235650-29235754,29236432-29236525,29236710-292368... 32 0.37
07_03_1562 - 27738369-27738568,27738767-27738962,27739079-277392... 32 0.37
01_06_1258 + 35806557-35806932,35807517-35807679,35807789-358078... 32 0.37
11_06_0458 + 23808402-23808469,23808800-23809684,23810011-238119... 29 2.6
06_03_0830 + 25159758-25162460 29 2.6
09_03_0010 - 11486996-11488073,11488704-11488838,11502017-11502429 29 3.4
05_03_0179 - 9257066-9258946 29 3.4
01_01_1176 - 9372879-9373097,9373814-9374278,9374372-9375447,937... 29 3.4
07_01_0524 + 3892340-3894625,3894995-3895109,3895204-3895298,389... 29 4.5
05_07_0027 + 27140626-27141457,27143101-27143901,27144838-271448... 28 6.0
05_05_0147 + 22715144-22715444,22716245-22716407,22716484-227165... 28 6.0
02_04_0482 + 23291986-23292181,23292289-23292317,23293500-232936... 28 6.0
01_06_0482 - 29672720-29673854,29673941-29676267 28 6.0
>02_01_0550 +
4044683-4044784,4044862-4044975,4045277-4045360,
4045818-4045917,4046923-4046971,4047071-4047158,
4047251-4047361,4047771-4047833,4047942-4048052,
4048517-4048582,4048689-4048766,4049553-4049630,
4049784-4049850,4049930-4050015,4050301-4050333,
4050426-4050458,4050754-4050854,4050986-4051071,
4051478-4051584,4051683-4051839,4051854-4051984
Length = 614
Score = 181 bits (441), Expect = 4e-46
Identities = 83/168 (49%), Positives = 115/168 (68%)
Frame = +2
Query: 152 VFAVHNPADDSVVAEVPDMDSKDAQNALLTASNAFQTWKDTTAKERSRILRRWFDLCEKN 331
++ V NPA +A V M SK+ +A+ +A + F +W TA ERS+ LR+W DL +
Sbjct: 98 LYLVQNPATGETLANVSCMGSKETSDAIASAHSTFYSWSKLTANERSKALRKWHDLIISH 157
Query: 332 TDNLAEVITAESGKPLAEAKGEVAYGNSFLEWFADSARHINGEIIPSPWPNKQILLTRNP 511
+ LA ++T E GKP+ EA EV YG SF+E+FA+ A+ I G+IIP ++++L+ + P
Sbjct: 158 KEELALLMTLEQGKPMKEALVEVTYGASFIEYFAEEAKRIYGDIIPPTLSDRRLLVLKQP 217
Query: 512 LGVVSVITPWNFPFAMITRKVGALMAAGCTCVIKPSEDTPLSALAAVD 655
+GVV +TPWNFP AMITRKVG +A GCT V+KPSE TPL+ALAA D
Sbjct: 218 VGVVGAVTPWNFPLAMITRKVGPALACGCTVVVKPSEFTPLTALAAAD 265
>06_03_0627 +
22903346-22903523,22906010-22906152,22906235-22906618,
22906980-22907069,22907147-22907320,22907414-22907551,
22907719-22907856,22907958-22908019,22908240-22908513
Length = 526
Score = 126 bits (303), Expect = 2e-29
Identities = 68/180 (37%), Positives = 100/180 (55%), Gaps = 3/180 (1%)
Frame = +2
Query: 113 YVNGEWVKAKSNLVFAVHNPADDSVVAEVPDMDSKDAQNALLTASNAFQ--TWKDTTAKE 286
++NG +V A S F +P V+A V + D +D A+ A AF W + E
Sbjct: 49 FINGRFVDAASGKTFETRDPRTGDVIARVAEGDKEDVDLAVKAAREAFDHGEWPRMSGSE 108
Query: 287 RSRILRRWFDLCEKNTDNLAEVITAESGKPLAEAKG-EVAYGNSFLEWFADSARHINGEI 463
R R++ ++ ++ E++ D LA + + ++GKPLA A+ +V L +FA +A I+GE
Sbjct: 109 RGRVMAKYAEVVERHADELAALESLDAGKPLAAARAVDVGECVGILRYFAGAADKIHGET 168
Query: 464 IPSPWPNKQILLTRNPLGVVSVITPWNFPFAMITRKVGALMAAGCTCVIKPSEDTPLSAL 643
+ + L R PLGV +I PWNFP M KV +AAGCT V+KP+E TPLSAL
Sbjct: 169 LKMSRQLQGYTL-REPLGVAGLIVPWNFPAIMFFSKVSPALAAGCTVVVKPAEQTPLSAL 227
>06_01_1105 +
9102059-9102167,9103770-9103907,9104125-9104267,
9104362-9104515,9104610-9104839,9105382-9105471,
9105606-9105779,9105873-9106010,9106212-9106349,
9106450-9106511,9106744-9106972,9108531-9109364
Length = 812
Score = 124 bits (300), Expect = 5e-29
Identities = 70/184 (38%), Positives = 103/184 (55%), Gaps = 3/184 (1%)
Frame = +2
Query: 107 QAYVNGEWVKAKSNLVFAVHNPADDSVVAEVPDMDSKDAQNALLTASNAFQT--WKDTTA 280
Q ++G++V + S F +P ++A V + D++D A+ A AF W TA
Sbjct: 70 QLLIDGKFVDSASGKTFPTLDPRTGELIAHVAEGDAEDINRAVHAARKAFDEGPWPKMTA 129
Query: 281 KERSRILRRWFDLCEKNTDNLAEVITAESGKPLAEAKG-EVAYGNSFLEWFADSARHING 457
ERSRIL R+ DL EK+ D +A + T ++GKP A+A EV + ++A A I+G
Sbjct: 130 YERSRILLRFADLIEKHNDEIAALETWDNGKPYAQAANIEVPMVARLMRYYAGWADKIHG 189
Query: 458 EIIPSPWPNKQILLTRNPLGVVSVITPWNFPFAMITRKVGALMAAGCTCVIKPSEDTPLS 637
++P+ P+ + + P+GV I PWNFP M KVG +A G T V+K +E TPLS
Sbjct: 190 LVVPADGPH-HVQVLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTVVLKTAEQTPLS 248
Query: 638 ALAA 649
AL A
Sbjct: 249 ALFA 252
>01_05_0545 +
23109920-23110040,23113363-23113505,23113626-23114009,
23114106-23114219,23114310-23114483,23114608-23114745,
23114884-23115021,23115094-23115155,23115268-23115541
Length = 515
Score = 120 bits (290), Expect = 8e-28
Identities = 68/180 (37%), Positives = 99/180 (55%), Gaps = 3/180 (1%)
Frame = +2
Query: 113 YVNGEWVKAKSNLVFAVHNPADDSVVAEVPDMDSKDAQNALLTASNAFQ--TWKDTTAKE 286
++NGE+V A S F +P V+A + + D D A+ A AF+ W + E
Sbjct: 30 FINGEFVDAASGKTFKTRDPRTGDVLAHIAEADKADVDLAVKAAREAFEHGKWPRMSGYE 89
Query: 287 RSRILRRWFDLCEKNTDNLAEVITAESGKPLAEAKG-EVAYGNSFLEWFADSARHINGEI 463
RSR++ + DL E++ D LA + A++GK L K ++ + ++A +A I+GE
Sbjct: 90 RSRVMNKLADLVEQHADELAALDGADAGKLLTLGKIIDMPAAAQMMRYYAGAADKIHGES 149
Query: 464 IPSPWPNKQILLTRNPLGVVSVITPWNFPFAMITRKVGALMAAGCTCVIKPSEDTPLSAL 643
+ + L R P+GVV VI PWNFP M KV +AAGCT V+KP+E TPLSAL
Sbjct: 150 LRVAGKYQGYTL-REPIGVVGVIIPWNFPTMMFFLKVSPALAAGCTIVVKPAEQTPLSAL 208
>02_05_0620 -
30412004-30412429,30412509-30412646,30412729-30412866,
30412966-30413139,30413211-30413684,30413775-30413917,
30414002-30414160,30414943-30415042
Length = 583
Score = 120 bits (289), Expect = 1e-27
Identities = 66/179 (36%), Positives = 97/179 (54%), Gaps = 3/179 (1%)
Frame = +2
Query: 116 VNGEWVKAKSNLVFAVHNPADDSVVAEVPDMDSKDAQNALLTASNAFQT--WKDTTAKER 289
+NG +V A S FA +P V+A V + D++D A+ A AF W TA ER
Sbjct: 77 INGNFVDAASGKTFATVDPRTGDVIARVAEGDAEDVNRAVAAARRAFDEGPWPRMTAYER 136
Query: 290 SRILRRWFDLCEKNTDNLAEVITAESGKPLAEAKG-EVAYGNSFLEWFADSARHINGEII 466
R+L R+ DL E++ D +A + T + GK L + G EV ++ ++ A I+G ++
Sbjct: 137 CRVLLRFADLIEQHADEIAALETWDGGKTLEQTTGTEVPMVARYMRYYGGWADKIHGLVV 196
Query: 467 PSPWPNKQILLTRNPLGVVSVITPWNFPFAMITRKVGALMAAGCTCVIKPSEDTPLSAL 643
P+ P+ + + P+GV I PWNFP M KVG +A G V+K +E TPLSAL
Sbjct: 197 PADGPH-HVQVLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNAVVLKTAEQTPLSAL 254
>04_04_0154 -
23146445-23146535,23146689-23146795,23146933-23146993,
23147070-23147221,23147306-23147383,23147696-23147809,
23147880-23147956,23148128-23148194,23148341-23148406,
23148528-23148651,23148733-23148825,23149446-23149594,
23149681-23149761,23150502-23150644,23150758-23150872
Length = 505
Score = 105 bits (253), Expect = 2e-23
Identities = 61/189 (32%), Positives = 98/189 (51%), Gaps = 8/189 (4%)
Frame = +2
Query: 101 RNQAYVNGEWVKAKSNLVFAVHNPADDSVVAEVPDMDSKDAQNALLTASNAF-----QTW 265
R ++ G W + V NPA ++ + ++P ++D + A+ A +AF + W
Sbjct: 9 RRGLFIGGGWREPSLGRRLPVVNPATEATIGDIPAATAEDVELAVSAARDAFGRDGGRHW 68
Query: 266 KDTTAKERSRILRRWFDLCEKNTDNLAEVITAESGKPLAEAKGEVAYGNSFLEWFADSAR 445
R++ L+ + LA + T +SGKPL EA G++ + E++AD A
Sbjct: 69 SRAPGAVRAKYLKAIAAKIKDKKSYLALLETLDSGKPLDEAAGDMEDVAACFEYYADLAE 128
Query: 446 HINGEI---IPSPWPNKQILLTRNPLGVVSVITPWNFPFAMITRKVGALMAAGCTCVIKP 616
++G+ I P N + + + P+GVV +ITPWN+P M T KV +AAGCT V+KP
Sbjct: 129 ALDGKQRAPISLPMENFESYVLKEPIGVVGLITPWNYPLLMATWKVAPALAAGCTAVLKP 188
Query: 617 SEDTPLSAL 643
SE L+ L
Sbjct: 189 SELASLTCL 197
>01_05_0544 +
23098921-23098953,23099209-23099272,23099942-23100084,
23100246-23100719,23100950-23101123,23101230-23101367,
23101489-23101589,23101910-23102183
Length = 466
Score = 105 bits (251), Expect = 4e-23
Identities = 59/166 (35%), Positives = 89/166 (53%), Gaps = 3/166 (1%)
Frame = +2
Query: 155 FAVHNPADDSVVAEVPDMDSKDAQNALLTASNAFQ--TWKDTTAKERSRILRRWFDLCEK 328
F +P V+A++ + D D A+ A AF W + R RIL ++ DL E+
Sbjct: 36 FETRDPRTGEVIAKIAEGDKADIDLAVKAAREAFDHGPWPRMSGFARGRILHKFADLVEQ 95
Query: 329 NTDNLAEVITAESGKPLAEAK-GEVAYGNSFLEWFADSARHINGEIIPSPWPNKQILLTR 505
+ + LA + T ++GK A K ++ G + L ++A +A ++GE + P L +
Sbjct: 96 HVEELAALDTVDAGKLFAMGKLVDIPGGANLLRYYAGAADKVHGETLKMARPCHGYTL-K 154
Query: 506 NPLGVVSVITPWNFPFAMITRKVGALMAAGCTCVIKPSEDTPLSAL 643
P+GVV I PWN+P M K +AAGCT V+KP+E TPLSAL
Sbjct: 155 EPVGVVGHIVPWNYPTTMFFFKASPALAAGCTMVVKPAEQTPLSAL 200
>07_01_0637 +
4767021-4767083,4767175-4767249,4767339-4767500,
4767624-4767702,4767922-4768076,4768225-4768288,
4768928-4769007,4769366-4769431,4769932-4769982,
4770087-4770238,4770270-4770287,4770323-4770413,
4771156-4771236,4771330-4771407,4772315-4772350,
4772425-4772468,4772567-4772645,4773035-4773125,
4773268-4773374
Length = 523
Score = 94.3 bits (224), Expect = 8e-20
Identities = 58/181 (32%), Positives = 90/181 (49%)
Frame = +2
Query: 101 RNQAYVNGEWVKAKSNLVFAVHNPADDSVVAEVPDMDSKDAQNALLTASNAFQTWKDTTA 280
R + + GE+V+++++ V NPA VV+ +P + + + A+ A AF W++T
Sbjct: 23 RVRLLIGGEFVESRADEHVDVTNPATQEVVSRIPLTTADEFRAAVDAARTAFPGWRNTPV 82
Query: 281 KERSRILRRWFDLCEKNTDNLAEVITAESGKPLAEAKGEVAYGNSFLEWFADSARHINGE 460
R RI+ ++ +L N D LAE IT E GK L +A G+V G +E GE
Sbjct: 83 TTRQRIMLKYQELIRANMDKLAENITTEQGKTLKDAWGDVFRGLEVVEHACGMGTLQMGE 142
Query: 461 IIPSPWPNKQILLTRNPLGVVSVITPWNFPFAMITRKVGALMAAGCTCVIKPSEDTPLSA 640
+ + R PLGV + I P+NFP + + G T V+KPSE P +A
Sbjct: 143 YVSNVSNGIDTFSIREPLGVCAGICPFNFPAMIPLWMFPIAVTCGNTFVLKPSEKDPGAA 202
Query: 641 L 643
+
Sbjct: 203 M 203
>09_04_0272 -
16278136-16278289,16278873-16278970,16279090-16279230,
16279701-16279865,16279941-16280117,16280330-16280510,
16280784-16280829,16281178-16281241,16281331-16281353,
16281964-16282036,16282410-16282541,16283343-16283429,
16283488-16283700
Length = 517
Score = 88.2 bits (209), Expect = 5e-18
Identities = 50/154 (32%), Positives = 78/154 (50%)
Frame = +2
Query: 185 VVAEVPDMDSKDAQNALLTASNAFQTWKDTTAKERSRILRRWFDLCEKNTDNLAEVITAE 364
V+AEV + +++ + + +A +TW A +R I+R+ D +L +++ E
Sbjct: 72 VIAEVVEASAREYEEGMRACYDAAKTWMAIPAPKRGEIVRQIGDALRAKLHHLGRLVSLE 131
Query: 365 SGKPLAEAKGEVAYGNSFLEWFADSARHINGEIIPSPWPNKQILLTRNPLGVVSVITPWN 544
GK L E GEV ++ +R +NG IIPS PN ++ NPLGVV VIT +N
Sbjct: 132 MGKILPEGIGEVQEIIDMCDYAVGLSRQLNGSIIPSERPNHMMMEVWNPLGVVGVITAFN 191
Query: 545 FPFAMITRKVGALMAAGCTCVIKPSEDTPLSALA 646
FP A++ + G V K + TPL +A
Sbjct: 192 FPCAVLGWNACIALVCGNCVVWKGAPTTPLITIA 225
>08_02_0717 +
20372728-20372836,20372936-20373078,20374131-20374211,
20374307-20374510,20374789-20374796,20375153-20375245,
20375377-20375500,20375585-20375650,20375841-20375907,
20376600-20376676,20377032-20377145,20377546-20377623,
20377705-20377856,20377960-20378020,20378292-20378398,
20378497-20378562,20379099-20379177,20379671-20379967
Length = 641
Score = 81.8 bits (193), Expect = 5e-16
Identities = 63/214 (29%), Positives = 92/214 (42%), Gaps = 29/214 (13%)
Frame = +2
Query: 101 RNQAYVNGEWVKAKSNLVFAVHNPADDSVVAEVPDMDSKDAQNALLTASNAFQT-----W 265
+ Q +V GEW V NPA +S + E+P ++D A+ A A + W
Sbjct: 7 QRQLFVAGEWRAPALGRRLPVVNPATESPIGEIPAGTAEDVDAAVAAAREALKRNRGRDW 66
Query: 266 KDTTAKERSRILRRWFDLCEKNTDNLAEVITAESGKPLAEAKGEVAYGNSFLEWFADSAR 445
R++ LR + LA + T + GKPL EA ++ E+FAD A
Sbjct: 67 ARAPGAVRAKYLRAIAAKIIERKSELARLETLDCGKPLDEAAWDMDDVAGCFEYFADLAE 126
Query: 446 HIN---GEIIPSPWPNKQILLTRNPLGVVSVITPW---------------------NFPF 553
++ + P N + L + P+GVV +ITPW N+P
Sbjct: 127 SLDKRQNAPVSLPMENFKCYLRKEPIGVVGLITPWYFTFFSHPALIFIYDPSMALMNYPL 186
Query: 554 AMITRKVGALMAAGCTCVIKPSEDTPLSALAAVD 655
M T KV +AAGCT V+KPSE ++ L D
Sbjct: 187 LMATWKVAPALAAGCTAVLKPSELASVTCLELAD 220
>08_02_0811 +
21438848-21439001,21439469-21439662,21439769-21439897,
21441552-21441671,21441751-21441887,21441969-21442124,
21442565-21442943,21443041-21443157,21443225-21443371
Length = 510
Score = 79.4 bits (187), Expect = 2e-15
Identities = 51/187 (27%), Positives = 85/187 (45%), Gaps = 7/187 (3%)
Frame = +2
Query: 113 YVNGEWVKAKSNLVFAVHNPADDSVVAEVPDMDSKDAQNALLTASNAFQTWKDTTAKERS 292
Y +GEW + S A+ NP V ++ + TA A + W T +R+
Sbjct: 22 YADGEWRVSASGKSVAIVNPTTRLTQYRVQACTQEEVNKVMETAKVAQKAWARTPLWKRA 81
Query: 293 RILRRWFDLCEKNTDNLAEVITAESGKPLAEAKGEVAYGNSFLEWFADSARHINGE---I 463
+L + + +++ +AE + E KP +A EV + + A+ I GE +
Sbjct: 82 ELLHKAAAILKEHKTPIAECLVKEIAKPAKDAISEVVRSGDLVSYTAEEGVRILGEGKLL 141
Query: 464 IPSPWP----NKQILLTRNPLGVVSVITPWNFPFAMITRKVGALMAAGCTCVIKPSEDTP 631
+ +P NK L ++ PLGVV I P+N+P + K+G + AG V+KP
Sbjct: 142 VSDSFPGNERNKYCLSSKVPLGVVLAIPPFNYPVNLAVSKIGPALIAGNALVLKPPTQGA 201
Query: 632 LSALAAV 652
++AL V
Sbjct: 202 VAALHMV 208
>07_03_1752 -
29218348-29218524,29218593-29218736,29218957-29219148,
29219225-29219440,29219873-29220010,29220137-29220232,
29221204-29221357,29221976-29222098,29222291-29222418,
29222669-29222773,29223396-29223437,29223631-29223746,
29223805-29223916
Length = 580
Score = 51.2 bits (117), Expect = 7e-07
Identities = 35/154 (22%), Positives = 68/154 (44%), Gaps = 4/154 (2%)
Frame = +2
Query: 164 HNPADDSVVAEVPDMDSKDAQNALLTASNAFQTWKDTTAKERSRILRRWFDLCEKNTDNL 343
+ PA + P + + + + A A + W ++ K+R + LR ++ D +
Sbjct: 107 YEPATMKYLGYFPALTPDEVKEHVAQARKAQKIWAKSSFKQRRQFLRILLKYILEHQDLI 166
Query: 344 AEVITAESGKPLAEAK-GEVAYGNSFLEWFADSA-RHINGEI--IPSPWPNKQILLTRNP 511
E+ + ++GK + +A GE+ + W D + + E +K+ + P
Sbjct: 167 CEISSRDTGKTMVDASLGEIMTTCEKITWLLDEGEKWLKPEYRSCGRSMLHKKAKVEFYP 226
Query: 512 LGVVSVITPWNFPFAMITRKVGALMAAGCTCVIK 613
LGV+ I WN+PF + + A + +G VIK
Sbjct: 227 LGVIGAIVSWNYPFHNVFNPMLAAIFSGNAAVIK 260
>11_01_0550 +
4355857-4356051,4357287-4357355,4357429-4357561,
4358248-4358454,4358601-4358716,4358814-4358918,
4359008-4359180,4359273-4359363,4359682-4359831,
4359928-4360173
Length = 494
Score = 45.6 bits (103), Expect = 4e-05
Identities = 25/52 (48%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Frame = +2
Query: 497 LTRNPLGVVSVITPWNFPFAMITRKVGALMAAGCTCVIKPSEDTP-LSALAA 649
+ PLGVV VI+ WN+PF + V +AAG V+KPSE P SAL A
Sbjct: 114 IVSEPLGVVLVISAWNYPFLLSIDPVIGAIAAGNAVVLKPSEIAPATSALFA 165
>12_01_0497 +
3946179-3946322,3947274-3947342,3948733-3948829,
3951827-3952033,3952149-3952264,3953189-3953293,
3953380-3953552,3953647-3953737,3953869-3954018,
3954482-3954724
Length = 464
Score = 44.4 bits (100), Expect = 9e-05
Identities = 20/44 (45%), Positives = 28/44 (63%)
Frame = +2
Query: 509 PLGVVSVITPWNFPFAMITRKVGALMAAGCTCVIKPSEDTPLSA 640
PLGVV VI+ WN+PF + + +AAG V+KPSE P ++
Sbjct: 89 PLGVVLVISAWNYPFLLSIDPIIGAIAAGNAVVLKPSEVAPATS 132
>04_04_0660 -
27017692-27017928,27018101-27018250,27018337-27018427,
27018512-27018672,27018783-27019015,27019119-27019325,
27021411-27021507,27021636-27021677,27021802-27022056
Length = 490
Score = 38.3 bits (85), Expect = 0.006
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = +2
Query: 497 LTRNPLGVVSVITPWNFPFAMITRKVGALMAAGCTCVIKPSEDTPLSA 640
L PLGV+ V + WN P + + +AAG +KPSE P +A
Sbjct: 113 LEPQPLGVILVFSCWNVPLGLSLEPLVGALAAGNAVALKPSELAPATA 160
>05_06_0214 -
26425100-26425922,26426008-26426058,26426183-26426256,
26426344-26426441,26426547-26426671,26426724-26426957,
26426992-26427037,26427101-26427152,26427331-26427367,
26427521-26427637,26428287-26428352,26428439-26428518,
26429102-26429311,26429650-26429739,26430093-26430182,
26430280-26430411,26430876-26431094,26431203-26431286,
26431543-26431656,26431857-26431914,26432535-26432602,
26432847-26432962,26433495-26433574,26433839-26433912
Length = 1045
Score = 36.3 bits (80), Expect = 0.023
Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Frame = +2
Query: 332 TDNLAEVITAESGKPLAEAKGEVAYGNSFLEWFA-DSARHINGEI-IPSPWPNKQILLTR 505
+D A++I S K +A EV FLE F D R + +P + R
Sbjct: 134 SDFFAKLIQRVSPKSYQQALAEVQVSQKFLENFCGDQVRFLARSFAVPGNHLGQSSNGYR 193
Query: 506 NPLGVVSVITPWNFPFAM-ITRKVGAL 583
P G V++ITP+NFP + + + +GAL
Sbjct: 194 WPYGPVAIITPFNFPLEIPLLQLMGAL 220
>01_05_0195 -
19111983-19112477,19112646-19113950,19114053-19114322,
19118884-19118950,19119229-19119284,19119530-19119590,
19120181-19120297,19120570-19120682,19120774-19120848,
19121464-19122045,19122056-19122271,19122372-19122497,
19126152-19126190,19126266-19126360,19126423-19126962,
19127102-19127327,19127385-19127437,19127534-19127701,
19128353-19128707,19128785-19128876,19129891-19129993
Length = 1717
Score = 34.3 bits (75), Expect = 0.091
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +1
Query: 499 HTKPSWSCFCNYSLELPLCNDN*KSWGFNGSWVYLCH*AF 618
+ + +W+CF +YS EL + N FN VYLC+ AF
Sbjct: 141 YNRKTWTCFLSYSTELEVLAVNFLYRRFNYGTVYLCNHAF 180
>07_03_1755 -
29235650-29235754,29236432-29236525,29236710-29236837,
29237077-29237181,29237706-29237773,29237926-29238037
Length = 203
Score = 32.3 bits (70), Expect = 0.37
Identities = 17/80 (21%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Frame = +2
Query: 164 HNPADDSVVAEVPDMDSKDAQNALLTASNAFQTWKDTTAKERSRILRRWFDLCEKNTDNL 343
+ PA + P + + + + A A + W +++K+R + LR ++ D +
Sbjct: 77 YEPATMKYLGYFPALTPDEVKEHVAQARKAQKIWAKSSSKQRCQFLRILLKYILEHQDLI 136
Query: 344 AEVITAESGKPLAEAK-GEV 400
E+ ++GK + +A GE+
Sbjct: 137 CEISPRDTGKTMVDASLGEI 156
>07_03_1562 -
27738369-27738568,27738767-27738962,27739079-27739230,
27739775-27739832,27739923-27740038,27740117-27740237,
27740348-27740635,27740817-27740987,27741091-27741741,
27742515-27742676,27742764-27743904,27743992-27744152,
27744239-27744564,27745678-27745825
Length = 1296
Score = 32.3 bits (70), Expect = 0.37
Identities = 15/39 (38%), Positives = 25/39 (64%), Gaps = 3/39 (7%)
Frame = +2
Query: 266 KDTTAKERSRILRRWFDLCEKNTDNLA---EVITAESGK 373
+D +A RSR+L+ W +LCE+N ++ EV + SG+
Sbjct: 388 RDVSAYTRSRVLQVWAELCEENAISIGLWNEVASVASGR 426
>01_06_1258 +
35806557-35806932,35807517-35807679,35807789-35807837,
35807943-35808866,35808954-35809049,35809142-35809257,
35809345-35809447,35809570-35809658,35809750-35809900,
35809995-35810141,35810238-35810366,35810451-35810529,
35810616-35810725
Length = 843
Score = 32.3 bits (70), Expect = 0.37
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 8/71 (11%)
Frame = +2
Query: 236 LTASNAFQTWKDTTAKERSRILRRWFDLCEKNTDNLAE-------VITAESGKPLAEAKG 394
+T + W++ T + LR +FD+C+KN D + +I + S LA+ KG
Sbjct: 153 ITKEQLKEFWEEMTDQNFDSRLRIFFDMCDKNGDGMLTEDEVKEVIILSASANKLAKLKG 212
Query: 395 EVA-YGNSFLE 424
A Y + +E
Sbjct: 213 HAATYASLIME 223
>11_06_0458 +
23808402-23808469,23808800-23809684,23810011-23811961,
23812210-23812285,23813064-23813072,23813243-23813335,
23813578-23813581,23813780-23814703,23814926-23815909,
23816073-23816118,23816376-23816951,23817253-23817798,
23817820-23818416
Length = 2252
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/72 (20%), Positives = 30/72 (41%)
Frame = +2
Query: 95 LLRNQAYVNGEWVKAKSNLVFAVHNPADDSVVAEVPDMDSKDAQNALLTASNAFQTWKDT 274
LL ++YV EW K + ++ + +D + + + D + L T + +
Sbjct: 423 LLTTKSYVRAEWFKVRDSIGSGIEKNSDVEEMNMILSLSYYDLPHHLRTCLLYLSMFPED 482
Query: 275 TAKERSRILRRW 310
R ++RRW
Sbjct: 483 YVINRDYLVRRW 494
>06_03_0830 + 25159758-25162460
Length = 900
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/68 (22%), Positives = 32/68 (47%)
Frame = +2
Query: 125 EWVKAKSNLVFAVHNPADDSVVAEVPDMDSKDAQNALLTASNAFQTWKDTTAKERSRILR 304
+W++ N + N A+D +VA + ++ +NA +T+ T + + + I +
Sbjct: 76 QWLQDAQNCGEDISNAAEDLIVAVLSALECLPVENAQITSCGVLHTVEHLLSHSNTDINK 135
Query: 305 RWFDLCEK 328
+ LC K
Sbjct: 136 KAGVLCHK 143
>09_03_0010 - 11486996-11488073,11488704-11488838,11502017-11502429
Length = 541
Score = 29.1 bits (62), Expect = 3.4
Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 4/80 (5%)
Frame = +2
Query: 125 EWVKAKSNLVFAVHNPADDSVVAEVPDMDSKDAQNALLTASNAFQTWKDTTAKERSRILR 304
EW K +++ + + N D + ++ + + + L T + + ERSR++R
Sbjct: 299 EWYKVYNSIGYGLGNNHDMKNMRKILSLSYHNLPSHLRTCLLYLSIFPEDYEIERSRLIR 358
Query: 305 RW----FDLCEKNTDNLAEV 352
W F EK+ DNL E+
Sbjct: 359 MWISEGFIHPEKDGDNLFEL 378
>05_03_0179 - 9257066-9258946
Length = 626
Score = 29.1 bits (62), Expect = 3.4
Identities = 24/89 (26%), Positives = 37/89 (41%), Gaps = 3/89 (3%)
Frame = +2
Query: 386 AKGEVAYGNSFLEWFADSARHINGEII---PSPWPNKQILLTRNPLGVVSVITPWNFPFA 556
++G A G A S + G+ + P PWPN Q L + VV ++ W+ P
Sbjct: 396 SQGSEARGGEVSMELATSQANCKGDRVEHQPQPWPNPQ--LNESSGDVVYLLQRWSLPDL 453
Query: 557 MITRKVGALMAAGCTCVIKPSEDTPLSAL 643
+ V + G + K + P SAL
Sbjct: 454 SLRIGVAIVQEQG-QLLRKQDKKNPRSAL 481
>01_01_1176 -
9372879-9373097,9373814-9374278,9374372-9375447,
9375534-9375687,9375783-9375879,9376238-9376374
Length = 715
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +2
Query: 257 QTWKDTTAKERSRILRRWFDLCEKNTDNLAEVITAESGK 373
Q W+ ++ + L RWF+ +D L EV++A GK
Sbjct: 133 QRWESLRRSKKYQNLVRWFNSIADYSDTLDEVVSAYVGK 171
>07_01_0524 + 3892340-3894625,3894995-3895109,3895204-3895298,
3895929-3896167,3896524-3896610,3896967-3897066,
3897908-3898115,3898224-3899422
Length = 1442
Score = 28.7 bits (61), Expect = 4.5
Identities = 19/75 (25%), Positives = 34/75 (45%)
Frame = +2
Query: 128 WVKAKSNLVFAVHNPADDSVVAEVPDMDSKDAQNALLTASNAFQTWKDTTAKERSRILRR 307
+V A +N V +P+D EVP + S ++ ++ NA T T + +
Sbjct: 1253 FVSAVANNVATTEDPSDSVADCEVPIVRSIQQKDEVIADKNACATIDQTAVDD---VANN 1309
Query: 308 WFDLCEKNTDNLAEV 352
+ E +TD+ AE+
Sbjct: 1310 FVATTENDTDSTAEL 1324
>05_07_0027 +
27140626-27141457,27143101-27143901,27144838-27144873,
27145133-27145420,27145836-27146289,27146520-27146964
Length = 951
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +2
Query: 32 LRSGNLVESQKMYINQCRRLHLLRNQAYV 118
LR G +V +++Y N CRR+ N+A +
Sbjct: 655 LRDGRVVAVKRLYNNSCRRVEQFVNEAAI 683
>05_05_0147 +
22715144-22715444,22716245-22716407,22716484-22716532,
22716626-22716739,22716812-22717234,22717307-22717693,
22717777-22717872,22717978-22718093,22718137-22718272,
22718392-22718480,22718586-22718736,22719057-22719185,
22719276-22719354,22719435-22719544
Length = 780
Score = 28.3 bits (60), Expect = 6.0
Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 8/71 (11%)
Frame = +2
Query: 236 LTASNAFQTWKDTTAKERSRILRRWFDLCEKNTD-NLAE------VITAESGKPLAEAKG 394
+T + W++ T + LR +FD+C+KN D L E ++ + + LA+ K
Sbjct: 128 ITKEQLKEFWEELTDQNFDSRLRIFFDMCDKNGDGQLTEDEVKEVIVLSAAANKLAKLKS 187
Query: 395 EVA-YGNSFLE 424
A Y + +E
Sbjct: 188 HAATYASLIME 198
>02_04_0482 + 23291986-23292181,23292289-23292317,23293500-23293602,
23293855-23293979,23294788-23294920,23295468-23295739,
23295806-23295873,23296126-23296265,23296443-23296529,
23296610-23297118,23297203-23298020,23298054-23298252,
23299084-23299228,23299260-23299314,23301184-23301310,
23301399-23301468,23301980-23302085,23302168-23302279,
23302775-23302897,23303000-23303159,23303283-23303359,
23303457-23303509,23303683-23303737,23304032-23304706
Length = 1478
Score = 28.3 bits (60), Expect = 6.0
Identities = 17/63 (26%), Positives = 32/63 (50%)
Frame = +2
Query: 338 NLAEVITAESGKPLAEAKGEVAYGNSFLEWFADSARHINGEIIPSPWPNKQILLTRNPLG 517
N+A A +G +G +A ++ + + SAR +GE++P+P N + +P G
Sbjct: 1305 NIASTSAAPAGASDTSDEGVMADSSATADT-SGSARAESGELVPTPSANNTVTDEVDPTG 1363
Query: 518 VVS 526
V+
Sbjct: 1364 TVA 1366
>01_06_0482 - 29672720-29673854,29673941-29676267
Length = 1153
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/57 (28%), Positives = 28/57 (49%)
Frame = -3
Query: 438 LSANHSRNELP*ATSPLASASGFPDSAVITSAKLSVFFSHKSNHLLKIRDRSFAVVS 268
+S + R L +T P+A+A G + + + V+FS + +K R F VV+
Sbjct: 139 ISVHFRRMSLCASTRPVAAALGAASFEEVLTQRSPVYFSRGAKAAVKYEPRPFVVVA 195
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,352,371
Number of Sequences: 37544
Number of extensions: 421904
Number of successful extensions: 1032
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 991
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1020
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1726796312
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -