Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12p19f
(522 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9V3G1 Cluster: 60S ribosomal protein L8; n=71; Eukaryo... 222 3e-57
UniRef50_P62917 Cluster: 60S ribosomal protein L8; n=122; cellul... 205 5e-52
UniRef50_Q06B43 Cluster: Ribosomal protein; n=7; Coelomata|Rep: ... 167 2e-40
UniRef50_Q41960 Cluster: 60S ribosomal protein KD4/L2; n=3; Euka... 153 2e-36
UniRef50_O15574 Cluster: 60S ribosomal protein L8; n=1; Entamoeb... 114 1e-24
UniRef50_Q5BZD1 Cluster: SJCHGC07017 protein; n=1; Schistosoma j... 110 2e-23
UniRef50_Q3T1K8 Cluster: Rpl8 protein; n=8; Coelomata|Rep: Rpl8 ... 79 5e-14
UniRef50_Q8TY93 Cluster: 50S ribosomal protein L2P; n=17; Euryar... 79 5e-14
UniRef50_Q3LWH0 Cluster: Ribosomal protein L8; n=1; Bigelowiella... 77 2e-13
UniRef50_Q8ZYF5 Cluster: 50S ribosomal protein L2P; n=6; Thermop... 74 2e-12
UniRef50_Q975I4 Cluster: 50S ribosomal protein L2P; n=10; Archae... 73 3e-12
UniRef50_Q9YFN1 Cluster: 50S ribosomal protein L2P; n=3; Archaea... 72 7e-12
UniRef50_Q8TRU4 Cluster: 50S ribosomal protein L2P; n=12; Archae... 69 9e-11
UniRef50_UPI00015BAE9D Cluster: LSU ribosomal protein L2P; n=1; ... 61 1e-08
UniRef50_P60408 Cluster: 50S ribosomal protein L2P; n=1; Nanoarc... 58 2e-07
UniRef50_A7DQR3 Cluster: Ribosomal protein L2; n=1; Candidatus N... 57 3e-07
UniRef50_Q8SSM6 Cluster: 60S ribosomal protein L8; n=1; Encephal... 56 5e-07
UniRef50_Q88XY3 Cluster: 50S ribosomal protein L2; n=90; Bacteri... 56 5e-07
UniRef50_A0RZ09 Cluster: Ribosomal protein L2; n=2; Crenarchaeot... 54 2e-06
UniRef50_Q8YHN7 Cluster: 50S ribosomal protein L2; n=133; cellul... 52 8e-06
UniRef50_Q6F1Z1 Cluster: 50S ribosomal protein L2; n=7; cellular... 51 2e-05
UniRef50_P56791 Cluster: Chloroplast 50S ribosomal protein L2; n... 51 2e-05
UniRef50_Q97BX4 Cluster: 50S ribosomal protein L2P; n=4; Thermop... 50 4e-05
UniRef50_Q01G37 Cluster: Ribosomal protein L2, bacterial and org... 49 7e-05
UniRef50_A5C022 Cluster: Putative uncharacterized protein; n=1; ... 48 1e-04
UniRef50_Q605B5 Cluster: 50S ribosomal protein L2; n=396; cellul... 48 1e-04
UniRef50_Q5IX18 Cluster: 50S ribosomal protein L2; n=1; Protothe... 47 3e-04
UniRef50_A5AS87 Cluster: Putative uncharacterized protein; n=1; ... 46 5e-04
UniRef50_O66434 Cluster: 50S ribosomal protein L2; n=113; cellul... 44 0.002
UniRef50_P75577 Cluster: 50S ribosomal protein L2; n=17; Bacteri... 44 0.003
UniRef50_A7R935 Cluster: Chromosome undetermined scaffold_3264, ... 43 0.005
UniRef50_Q2WGE5 Cluster: Ribosomal protein L2; n=5; Tracheophyta... 41 0.020
UniRef50_Q9AIG2 Cluster: Ribosomal protein L2; n=4; Bacteria|Rep... 39 0.080
UniRef50_Q4S2E6 Cluster: Chromosome 17 SCAF14762, whole genome s... 35 1.3
UniRef50_A7CUV2 Cluster: Ribosomal protein L2; n=1; Opitutaceae ... 35 1.3
UniRef50_A6YEA9 Cluster: Ribosomal protein L2; n=1; Chlorokybus ... 34 1.7
UniRef50_UPI00003617AD Cluster: 39S ribosomal protein L2, mitoch... 34 2.3
UniRef50_A7PXN3 Cluster: Chromosome chr12 scaffold_36, whole gen... 33 3.0
UniRef50_Q5T653 Cluster: 39S ribosomal protein L2, mitochondrial... 33 3.0
UniRef50_P46763 Cluster: Mitochondrial 60S ribosomal protein L2;... 33 3.0
UniRef50_Q7YN79 Cluster: Ribosomal protein L2; n=1; Eimeria tene... 33 4.0
UniRef50_Q0C283 Cluster: Conserved domain protein; n=1; Hyphomon... 32 6.9
UniRef50_Q5EDE3 Cluster: DC1 domain-containing protein; n=11; Ar... 32 6.9
UniRef50_A6QQ50 Cluster: MAP4K1 protein; n=1; Bos taurus|Rep: MA... 32 6.9
UniRef50_A7AUQ4 Cluster: Mac/perforin domain containing protein;... 32 6.9
UniRef50_Q9MTE5 Cluster: Ribosomal protein L2; n=1; Toxoplasma g... 32 9.2
UniRef50_Q2LZ31 Cluster: GA20496-PA; n=2; Diptera|Rep: GA20496-P... 32 9.2
>UniRef50_Q9V3G1 Cluster: 60S ribosomal protein L8; n=71;
Eukaryota|Rep: 60S ribosomal protein L8 - Drosophila
melanogaster (Fruit fly)
Length = 256
Score = 222 bits (543), Expect = 3e-57
Identities = 99/118 (83%), Positives = 111/118 (94%)
Frame = +2
Query: 167 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 346
MGRVIRAQRKGAGSVF +H KKRKGA KLRSLD+AER GYI+GVVKDIIHDPGRGAPLAV
Sbjct: 1 MGRVIRAQRKGAGSVFKAHVKKRKGAAKLRSLDFAERSGYIRGVVKDIIHDPGRGAPLAV 60
Query: 347 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEE 520
VHFRDPY++K RKELFIAPEG++TGQFVYCG+KATL++GNVMP+ MPEGTI+CNLEE
Sbjct: 61 VHFRDPYRYKIRKELFIAPEGMHTGQFVYCGRKATLQIGNVMPLSQMPEGTIICNLEE 118
>UniRef50_P62917 Cluster: 60S ribosomal protein L8; n=122; cellular
organisms|Rep: 60S ribosomal protein L8 - Homo sapiens
(Human)
Length = 257
Score = 205 bits (500), Expect = 5e-52
Identities = 93/118 (78%), Positives = 104/118 (88%)
Frame = +2
Query: 167 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 346
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 347 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEE 520
V FRDPY+FK R ELFIA EG++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEE
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEE 118
>UniRef50_Q06B43 Cluster: Ribosomal protein; n=7; Coelomata|Rep:
Ribosomal protein - Codakia orbicularis
Length = 234
Score = 167 bits (405), Expect = 2e-40
Identities = 73/98 (74%), Positives = 85/98 (86%)
Frame = +2
Query: 167 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 346
MGRVIR+QRKG GSVF +HTK RKG LR++D+AERHGY+KGVVKDI+HDPGRGAPLA
Sbjct: 1 MGRVIRSQRKGPGSVFKAHTKHRKGKAALRAVDFAERHGYVKGVVKDIVHDPGRGAPLAK 60
Query: 347 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEV 460
V FRDPYK+K R E FIA EG+YTGQF+YCGKKA L++
Sbjct: 61 VTFRDPYKYKMRTETFIATEGMYTGQFIYCGKKANLQI 98
>UniRef50_Q41960 Cluster: 60S ribosomal protein KD4/L2; n=3;
Eukaryota|Rep: 60S ribosomal protein KD4/L2 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 123
Score = 153 bits (372), Expect = 2e-36
Identities = 73/110 (66%), Positives = 86/110 (78%)
Frame = +2
Query: 167 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 346
MGRVIRAQRK AGSVF SHT RKG K RSLD+ ER+GY+KGVV +IIHDPGRGAPLA
Sbjct: 1 MGRVIRAQRKVAGSVFKSHTHHRKGPAKFRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR 60
Query: 347 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEG 496
V FR P++FK +KELF+ E +YCGKKATL VGNV+P+ ++PEG
Sbjct: 61 VTFRHPFRFKKQKELFVXXEVCTPVSSLYCGKKATLVVGNVLPLRSIPEG 110
>UniRef50_O15574 Cluster: 60S ribosomal protein L8; n=1; Entamoeba
histolytica|Rep: 60S ribosomal protein L8 - Entamoeba
histolytica
Length = 158
Score = 114 bits (275), Expect = 1e-24
Identities = 48/76 (63%), Positives = 62/76 (81%)
Frame = +2
Query: 290 KGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNV 469
+G+VK I HDPGRGAPLA V FR+P ++ KELFI EGLY+GQ++YCG KA+L +GNV
Sbjct: 33 RGLVKSIEHDPGRGAPLARVVFRNPRQYGLDKELFICAEGLYSGQYIYCGSKASLHIGNV 92
Query: 470 MPVGAMPEGTIVCNLE 517
+P+G PEGT+VCN+E
Sbjct: 93 LPIGQCPEGTVVCNVE 108
>UniRef50_Q5BZD1 Cluster: SJCHGC07017 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC07017 protein - Schistosoma
japonicum (Blood fluke)
Length = 112
Score = 110 bits (264), Expect = 2e-23
Identities = 50/69 (72%), Positives = 58/69 (84%)
Frame = +2
Query: 179 IRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFR 358
IR+QRKGAG VF +HTK RKGA +LR +D+AERHGYI+GVVK+IIHDPGRGAPLA V FR
Sbjct: 1 IRSQRKGAGGVFKAHTKHRKGAARLRPVDFAERHGYIRGVVKEIIHDPGRGAPLAKVAFR 60
Query: 359 DPYKFKTRK 385
D Y +K K
Sbjct: 61 DVYSYKLIK 69
>UniRef50_Q3T1K8 Cluster: Rpl8 protein; n=8; Coelomata|Rep: Rpl8
protein - Rattus norvegicus (Rat)
Length = 47
Score = 79.4 bits (187), Expect = 5e-14
Identities = 35/46 (76%), Positives = 41/46 (89%)
Frame = +2
Query: 167 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVK 304
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VK
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVK 46
>UniRef50_Q8TY93 Cluster: 50S ribosomal protein L2P; n=17;
Euryarchaeota|Rep: 50S ribosomal protein L2P -
Methanopyrus kandleri
Length = 243
Score = 79.4 bits (187), Expect = 5e-14
Identities = 41/118 (34%), Positives = 64/118 (54%), Gaps = 1/118 (0%)
Frame = +2
Query: 167 MGRVIRAQRKGAGS-VFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLA 343
MG+ IR QR G G + + + + +G + R D E+ G + G V +++HDP R AP+A
Sbjct: 1 MGKRIRPQRLGRGGPTYRAPSHRYRGRIEHRPYDEQEKKGKVVGKVVELLHDPARNAPVA 60
Query: 344 VVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLE 517
V F D + L + PEG G + CG A ++ GN +P+ +PEG + N+E
Sbjct: 61 RVRFEDG-----EERLILVPEGTKVGDIIECGVSAEIKPGNTLPLAEIPEGVPIFNIE 113
>UniRef50_Q3LWH0 Cluster: Ribosomal protein L8; n=1; Bigelowiella
natans|Rep: Ribosomal protein L8 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 281
Score = 77.4 bits (182), Expect = 2e-13
Identities = 41/118 (34%), Positives = 61/118 (51%)
Frame = +2
Query: 167 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 346
MG++I AQRKG + +R G +S+ E++ IKG++ D + P
Sbjct: 27 MGKIISAQRKGKIGFQKQGSSRRIGKISYKSMTNEEKYSVIKGIISKFHIDTVKKVPAIK 86
Query: 347 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEE 520
+ F FK EL+IA E LY + + CG +A GNV+P+ +P G VCN+EE
Sbjct: 87 IKFNVTKYFKNYYELYIAVEKLYLNKTIACGLQARPITGNVLPLFNIPNGVFVCNVEE 144
>UniRef50_Q8ZYF5 Cluster: 50S ribosomal protein L2P; n=6;
Thermoproteales|Rep: 50S ribosomal protein L2P -
Pyrobaculum aerophilum
Length = 246
Score = 73.7 bits (173), Expect = 2e-12
Identities = 47/119 (39%), Positives = 66/119 (55%), Gaps = 1/119 (0%)
Frame = +2
Query: 167 MGRVIRAQRKG-AGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLA 343
MG+ I QR+G GS F S + KR G + L GY V DI+H+PG AP+A
Sbjct: 1 MGKRILVQRRGRGGSQFRSPSWKRDGPVRYPPLGVISGKGY----VVDILHEPGLNAPVA 56
Query: 344 VVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEE 520
+ + +F A EGLY GQ V GK A+ + GN+M +G +PEGT++ N+E+
Sbjct: 57 KIVTENGVEFFN-----YAAEGLYVGQVVEIGKGASPKTGNIMILGEIPEGTMIFNVEK 110
>UniRef50_Q975I4 Cluster: 50S ribosomal protein L2P; n=10;
Archaea|Rep: 50S ribosomal protein L2P - Sulfolobus
tokodaii
Length = 238
Score = 73.3 bits (172), Expect = 3e-12
Identities = 44/119 (36%), Positives = 67/119 (56%), Gaps = 1/119 (0%)
Frame = +2
Query: 167 MGRVIRAQRKGAGSV-FVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLA 343
MG+ + QR G G + F S + +R G K+ +++ G G V DI+H+PG APLA
Sbjct: 1 MGKKLLQQRAGRGGINFRSPSWRRVGKAKIPNIE-----GEHIGKVIDIVHNPGTNAPLA 55
Query: 344 VVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEE 520
++ D KF + +GL GQ + GK A + GN++ VG +PEGTI+ N+E+
Sbjct: 56 LIKLDDGTKFYVP-----SVQGLVVGQKIQIGKNAAISNGNIVEVGNVPEGTIISNIEK 109
>UniRef50_Q9YFN1 Cluster: 50S ribosomal protein L2P; n=3;
Archaea|Rep: 50S ribosomal protein L2P - Aeropyrum
pernix
Length = 238
Score = 72.1 bits (169), Expect = 7e-12
Identities = 46/118 (38%), Positives = 62/118 (52%), Gaps = 1/118 (0%)
Frame = +2
Query: 167 MGRVIRAQRKGAGS-VFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLA 343
MG+ +R QR G G+ + S G K L ++G V ++IHDPGR PLA
Sbjct: 1 MGKRLRQQRAGRGTPTYRSRAHIHPGPAKYPPLS----GDTLRGKVVELIHDPGRYVPLA 56
Query: 344 VVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLE 517
V D +F L A EG+Y GQ + G A E GN++P+G +PEGT V N+E
Sbjct: 57 RVVREDGVEF-----LMPAAEGMYVGQIIEIGPAAKPEAGNILPLGKIPEGTEVFNVE 109
>UniRef50_Q8TRU4 Cluster: 50S ribosomal protein L2P; n=12;
Archaea|Rep: 50S ribosomal protein L2P - Methanosarcina
acetivorans
Length = 238
Score = 68.5 bits (160), Expect = 9e-11
Identities = 40/118 (33%), Positives = 63/118 (53%), Gaps = 1/118 (0%)
Frame = +2
Query: 167 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 346
MG+ + +Q +G G+ K LR + + ++G V I HDP R AP+A
Sbjct: 1 MGKRLISQNRGRGTP-TYRAPSHKYKADLRH-PRVDENSSLRGEVVGIEHDPARSAPIAK 58
Query: 347 VHFRDPYKFKTRKELFI-APEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLE 517
V F+ +ELF+ A EG+ G + CG A ++ GN++P+G +PEG +CN+E
Sbjct: 59 V------AFENGEELFLLASEGIAVGNIIECGDDAEVKPGNIVPIGNVPEGFFICNVE 110
>UniRef50_UPI00015BAE9D Cluster: LSU ribosomal protein L2P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L2P - Ignicoccus hospitalis KIN4/I
Length = 251
Score = 61.3 bits (142), Expect = 1e-08
Identities = 41/118 (34%), Positives = 61/118 (51%), Gaps = 1/118 (0%)
Frame = +2
Query: 167 MGRVIRAQRKGAGSVFVSHTKKRKGAP-KLRSLDYAERHGYIKGVVKDIIHDPGRGAPLA 343
MG+ +R QR G G+ + + AP + S + + +G V ++ HDPGR PLA
Sbjct: 1 MGKRLRVQRHGRGTPQWRNRGHLRVAPGRYPSPEVLKLDETYEGYVVELKHDPGRWVPLA 60
Query: 344 VVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLE 517
+ + F A EG+YTGQ V G A GN++P+ A+PEGT + N+E
Sbjct: 61 HIVIPNVADF-----WIPAAEGMYTGQKVQIGPNAAPVNGNILPLYAIPEGTQIFNVE 113
>UniRef50_P60408 Cluster: 50S ribosomal protein L2P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L2P -
Nanoarchaeum equitans
Length = 238
Score = 57.6 bits (133), Expect = 2e-07
Identities = 42/119 (35%), Positives = 62/119 (52%), Gaps = 2/119 (1%)
Frame = +2
Query: 167 MGRV-IRAQRKGAGS-VFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPL 340
MG+V + QR+G GS F S T + G K+ + D G + ++KD IH APL
Sbjct: 1 MGKVRLLVQRRGRGSPTFRSPTHRAAGKVKIPTFDGDLVKGKVVALIKDSIHY----APL 56
Query: 341 AVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLE 517
VV + + + L AP G+ G VY GK+A +G++ P+ +PEGT + LE
Sbjct: 57 MVVKWENG-----AQSLLPAPLGISVGDTVYYGKEAPNAIGSIKPLSEIPEGTKIYMLE 110
>UniRef50_A7DQR3 Cluster: Ribosomal protein L2; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L2
- Candidatus Nitrosopumilus maritimus SCM1
Length = 244
Score = 56.8 bits (131), Expect = 3e-07
Identities = 39/120 (32%), Positives = 59/120 (49%), Gaps = 2/120 (1%)
Frame = +2
Query: 167 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLR--SLDYAERHGYIKGVVKDIIHDPGRGAPL 340
MG+ +R+G G T K K +E+H +G + D++H+ GR APL
Sbjct: 1 MGKRPLVRRRGRGGNQFRSTSTGKVGTKANYPRFPLSEQH---EGEIIDLVHERGREAPL 57
Query: 341 AVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEE 520
A V F D A G G+ + G K+ +E GNV+ + +P+GTIVCN+E+
Sbjct: 58 AKVRFEDG-----SVSFVPAVLGAKVGETLQFGLKSKIEKGNVISIQNIPDGTIVCNIEK 112
>UniRef50_Q8SSM6 Cluster: 60S ribosomal protein L8; n=1;
Encephalitozoon cuniculi|Rep: 60S ribosomal protein L8 -
Encephalitozoon cuniculi
Length = 239
Score = 56.0 bits (129), Expect = 5e-07
Identities = 32/98 (32%), Positives = 55/98 (56%), Gaps = 1/98 (1%)
Frame = +2
Query: 227 KKRKGAPKLR-SLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAP 403
KK++ P ++ L Y +G V DI+H+ RGAP+A++ F++ + A
Sbjct: 12 KKKQRQPIVKVCLSYPIIPQVEEGEVIDIVHERSRGAPVAIISFKED------DCMVPAS 65
Query: 404 EGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLE 517
EG+YTGQ + G A +++GN+ + +PEG V ++E
Sbjct: 66 EGMYTGQKILIGDDAPIDIGNITKIKNVPEGMAVNSVE 103
>UniRef50_Q88XY3 Cluster: 50S ribosomal protein L2; n=90;
Bacteria|Rep: 50S ribosomal protein L2 - Lactobacillus
plantarum
Length = 279
Score = 56.0 bits (129), Expect = 5e-07
Identities = 37/113 (32%), Positives = 57/113 (50%), Gaps = 2/113 (1%)
Frame = +2
Query: 185 AQRKGAGSVFVSHTKKRKGAPK--LRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFR 358
A R G + V H R G K R +D+ + VK I +DP R A +A++ +
Sbjct: 41 AGRNSYGHITVRH---RGGGHKQQYRLVDFKRIKDEVPATVKAIEYDPNRTANIALLVYA 97
Query: 359 DPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLE 517
D K +AP+GL G V G +A ++VGN +P+ +P GT++ N+E
Sbjct: 98 DGVK-----SYILAPKGLEVGMQVQSGAEADIKVGNALPLTNIPVGTVIHNIE 145
>UniRef50_A0RZ09 Cluster: Ribosomal protein L2; n=2;
Crenarchaeota|Rep: Ribosomal protein L2 - Cenarchaeum
symbiosum
Length = 243
Score = 54.0 bits (124), Expect = 2e-06
Identities = 37/119 (31%), Positives = 59/119 (49%), Gaps = 1/119 (0%)
Frame = +2
Query: 167 MGRVIRAQRKGAGSV-FVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLA 343
MG+ +R+G G + F + T + K + + E+ +G V D++H+ GR APLA
Sbjct: 1 MGKRPLVRRRGRGGMQFRAATTGKIARAKYPAFELGEQR---EGTVIDLVHERGRDAPLA 57
Query: 344 VVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEE 520
+ F D L G G + G K+ + GNV+ V +P+GT VCN+E+
Sbjct: 58 KIRFEDGIVSYVPAVL-----GTRVGSSMNFGLKSEIRDGNVISVQNIPDGTTVCNVEK 111
>UniRef50_Q8YHN7 Cluster: 50S ribosomal protein L2; n=133; cellular
organisms|Rep: 50S ribosomal protein L2 - Brucella
melitensis
Length = 277
Score = 52.0 bits (119), Expect = 8e-06
Identities = 28/88 (31%), Positives = 46/88 (52%)
Frame = +2
Query: 254 RSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVY 433
R +D+ R + G V+ + +DP R A +A++ + D +AP+ L G V
Sbjct: 63 RFIDFKRRKLDVVGTVERLEYDPNRTAFIALIRYTDG-----ELAYILAPQRLAVGDQVV 117
Query: 434 CGKKATLEVGNVMPVGAMPEGTIVCNLE 517
G ++ GN MP+ +MP GTI+ N+E
Sbjct: 118 AGNSVDVKPGNAMPLSSMPVGTIIHNVE 145
>UniRef50_Q6F1Z1 Cluster: 50S ribosomal protein L2; n=7; cellular
organisms|Rep: 50S ribosomal protein L2 - Mesoplasma
florum (Acholeplasma florum)
Length = 281
Score = 50.8 bits (116), Expect = 2e-05
Identities = 33/112 (29%), Positives = 55/112 (49%)
Frame = +2
Query: 182 RAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRD 361
+A R G + H K K R +D+ + G + I +DP R A + +V++ D
Sbjct: 41 KAGRNNRGLITTRH-KGGGHKQKYRIIDFKRNKRDVVGTIATIEYDPNRNAFICLVNYLD 99
Query: 362 PYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLE 517
K R LF +G+ G + + A ++VGN P+ +PEGT++ N+E
Sbjct: 100 GEK---RYILFA--KGMTVGMKIVASEHADIKVGNAAPLKNIPEGTLIHNVE 146
>UniRef50_P56791 Cluster: Chloroplast 50S ribosomal protein L2;
n=423; cellular organisms|Rep: Chloroplast 50S ribosomal
protein L2 - Arabidopsis thaliana (Mouse-ear cress)
Length = 274
Score = 50.8 bits (116), Expect = 2e-05
Identities = 30/110 (27%), Positives = 51/110 (46%), Gaps = 2/110 (1%)
Frame = +2
Query: 194 KGAGSVFVSHTKKRKGAPK--LRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPY 367
KG + + + R G K R +D+ I G + I +DP R A + ++H+ D
Sbjct: 39 KGRNARGIITARHRGGGHKRLYRKIDFRRNAKDIYGRIVTIEYDPNRNAYICLIHYGDG- 97
Query: 368 KFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLE 517
K + P G G + G + +++GN +P+ MP GT + N+E
Sbjct: 98 ----EKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLTDMPLGTAIHNIE 143
>UniRef50_Q97BX4 Cluster: 50S ribosomal protein L2P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L2P -
Thermoplasma volcanium
Length = 234
Score = 49.6 bits (113), Expect = 4e-05
Identities = 40/118 (33%), Positives = 59/118 (50%), Gaps = 1/118 (0%)
Frame = +2
Query: 167 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 346
MG+ I QR+G GS+ V + + ++ L E VVKDIIH PGR +PL
Sbjct: 1 MGKHIIPQRRGHGSL-VYRSPSHRHVVDVKHLKPGEY------VVKDIIHAPGRNSPL-- 51
Query: 347 VHFRDPYKFKTRKELF-IAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLE 517
+ D T K+++ IA G Y GQ + G T+ G + +P+G+ V N+E
Sbjct: 52 LELVD----STGKKVYQIAFTGAYVGQKIVAGNVDTINPGTTTVLANIPDGSYVYNIE 105
>UniRef50_Q01G37 Cluster: Ribosomal protein L2, bacterial and
organelle form; n=5; cellular organisms|Rep: Ribosomal
protein L2, bacterial and organelle form - Ostreococcus
tauri
Length = 294
Score = 48.8 bits (111), Expect = 7e-05
Identities = 32/113 (28%), Positives = 56/113 (49%), Gaps = 1/113 (0%)
Frame = +2
Query: 182 RAQRKGAGSVFVSHTKKRKGAPKL-RSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFR 358
R R AG + V H K G +L R +D+ ++G ++ + +DP R A +A+V
Sbjct: 65 RGGRNNAGRITVWH--KGGGHKRLYRVIDFKRDLTGVRGTIRRLEYDPNRSAHIALVD-- 120
Query: 359 DPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLE 517
Y+ +AP G G + G ++ ++VGN +P+ +P T + N+E
Sbjct: 121 --YEGGNASRYVLAPHGSTPGDALESGPESDIKVGNALPLKNIPLQTTIHNIE 171
>UniRef50_A5C022 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 128
Score = 48.4 bits (110), Expect = 1e-04
Identities = 21/37 (56%), Positives = 26/37 (70%)
Frame = +2
Query: 386 ELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEG 496
E + E +YTGQFV C KKATL V NV+P+ + PEG
Sbjct: 40 EPIVVAESIYTGQFVCCSKKATLIVDNVLPLRSTPEG 76
>UniRef50_Q605B5 Cluster: 50S ribosomal protein L2; n=396; cellular
organisms|Rep: 50S ribosomal protein L2 - Methylococcus
capsulatus
Length = 281
Score = 48.0 bits (109), Expect = 1e-04
Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 2/96 (2%)
Frame = +2
Query: 224 TKKRKGAPK--LRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFI 397
T+ + G K R +D+ I V+ I +DP R A +A+V +RD + +
Sbjct: 57 TRHKGGGHKQFYRIVDFKRDKIDIPARVERIEYDPNRTAYIALVLYRDG-----ERRYIV 111
Query: 398 APEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIV 505
AP GL G + G+ A ++VGN +P+ +P GT+V
Sbjct: 112 APAGLSAGSEIVAGEFAAIKVGNSLPLRNIPVGTVV 147
>UniRef50_Q5IX18 Cluster: 50S ribosomal protein L2; n=1; Prototheca
wickerhamii|Rep: 50S ribosomal protein L2 - Prototheca
wickerhamii
Length = 218
Score = 46.8 bits (106), Expect = 3e-04
Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 4/113 (3%)
Frame = +2
Query: 191 RKGAGSVFVSHTKKRKGAPKL-RSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHF---R 358
R AG V H + G +L R +D+ G V+ + +DP R A LA++ R
Sbjct: 102 RNAAGCVTARH--RGGGQRRLYRLVDFVRGAASPAGTVERLEYDPIRSARLALLRLDGAR 159
Query: 359 DPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLE 517
+ + T +AP G+ G V CG A + G+ +P+ A+P G + N+E
Sbjct: 160 EGERSPTSHAYVLAPAGVGPGDRVMCGATAPIVPGSSLPLSAIPVGMPIHNVE 212
>UniRef50_A5AS87 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 185
Score = 46.0 bits (104), Expect = 5e-04
Identities = 25/86 (29%), Positives = 50/86 (58%)
Frame = -3
Query: 520 LFKIAHNGTLRHSSNRHHISNFKSCFLSTINKLACVEPFGSNEELLPCLELVWIAEVYNS 341
+ +AHNGTL S R +I+N + L+TI++L V G +E+L L +AE +S
Sbjct: 13 VLNVAHNGTLGDGSKRQYIANNEIGLLATIDELVGVHALGGDEQLFLMLVPEGVAEGNSS 72
Query: 340 QRCTSTRVMDYILNNSLDVSMTFSVI 263
+ + ++D + +++L+V++ + +
Sbjct: 73 KWGAAIGIVDDLGDHTLEVAIPLAEV 98
>UniRef50_O66434 Cluster: 50S ribosomal protein L2; n=113; cellular
organisms|Rep: 50S ribosomal protein L2 - Aquifex
aeolicus
Length = 304
Score = 44.4 bits (100), Expect = 0.002
Identities = 37/122 (30%), Positives = 56/122 (45%), Gaps = 10/122 (8%)
Frame = +2
Query: 182 RAQRKGAGSVFVSHTKKRKGAPKL-RSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFR 358
+ + + G++ H + G KL R +D+ + V I +DP R A + ++H+
Sbjct: 56 KGRSRQRGNITARH--RGGGHKKLYRIIDFKRDKSLVPAKVVSIEYDPFRSARICLLHYA 113
Query: 359 DPYKFKTRKELFIAPEGLYTGQFVY--------CGKKAT-LEVGNVMPVGAMPEGTIVCN 511
D K I PEGL G V GK ++ GN MP+ +PEGTIV N
Sbjct: 114 DG-----EKRYIIWPEGLKVGDTVMSISWEDAEAGKPLPEIKPGNAMPLKYIPEGTIVHN 168
Query: 512 LE 517
+E
Sbjct: 169 IE 170
>UniRef50_P75577 Cluster: 50S ribosomal protein L2; n=17;
Bacteria|Rep: 50S ribosomal protein L2 - Mycoplasma
pneumoniae
Length = 287
Score = 43.6 bits (98), Expect = 0.003
Identities = 31/111 (27%), Positives = 52/111 (46%), Gaps = 2/111 (1%)
Frame = +2
Query: 191 RKGAGSVFVSHTKKRKGAPKLRSLDYAERH-GYIKGVVKDIIHDPGRGAPLAVVHFRDPY 367
R G + V H R K R +D+ H I+ VK I +DP R ++++ + +
Sbjct: 47 RNNQGKITVRHQGGRNKR-KYRIIDFKRTHYDNIEATVKSIEYDPNRSCFVSLITYANG- 104
Query: 368 KFKTRKELFIAPEGLYTGQFVYCGKKAT-LEVGNVMPVGAMPEGTIVCNLE 517
K I+P+G+ G + + ++ G MP+ +PEGT V N+E
Sbjct: 105 ----AKSYIISPDGIKVGDKILASEHPIDIKPGFSMPLAFIPEGTQVHNIE 151
>UniRef50_A7R935 Cluster: Chromosome undetermined scaffold_3264,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_3264, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 66
Score = 42.7 bits (96), Expect = 0.005
Identities = 19/24 (79%), Positives = 20/24 (83%)
Frame = +2
Query: 167 MGRVIRAQRKGAGSVFVSHTKKRK 238
MGRVIRAQRKG GS+F SHT RK
Sbjct: 1 MGRVIRAQRKGVGSIFKSHTHHRK 24
>UniRef50_Q2WGE5 Cluster: Ribosomal protein L2; n=5;
Tracheophyta|Rep: Ribosomal protein L2 - Selaginella
uncinata (Blue spikemoss) (Peacock spikemoss)
Length = 282
Score = 40.7 bits (91), Expect = 0.020
Identities = 31/111 (27%), Positives = 48/111 (43%), Gaps = 2/111 (1%)
Frame = +2
Query: 191 RKGAGSVFVSHTKKRKGAPK--LRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDP 364
R+G + + ++ R G K R +D + G + + +DP R A ++ VH D
Sbjct: 40 RRGRNNRGIVTSRHRGGGHKRPYRHIDPRRSKRGVPGRIITVEYDPNRSAYISPVHHGDG 99
Query: 365 YKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLE 517
K PEG+ G + G A VGN P MP GT++ +E
Sbjct: 100 -----DKGYISHPEGIRVGDAIPTGPGAPTTVGNAPPPTHMPLGTVMHGIE 145
>UniRef50_Q9AIG2 Cluster: Ribosomal protein L2; n=4; Bacteria|Rep:
Ribosomal protein L2 - Carsonella ruddii
Length = 235
Score = 38.7 bits (86), Expect = 0.080
Identities = 29/105 (27%), Positives = 45/105 (42%), Gaps = 1/105 (0%)
Frame = +2
Query: 194 KGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKF 373
+ G + V H K K R +D+ IKG+V+ I +DP R A +A++ + D
Sbjct: 18 RSRGKISVRHIGK-KHKKFYRKIDFKRDKSNIKGIVESIHYDPNRNARIALIKYLD---- 72
Query: 374 KTRKELFIAPEGLYTGQFVYCG-KKATLEVGNVMPVGAMPEGTIV 505
K I L FV K +L GN + + GT++
Sbjct: 73 -GEKRYIIKTNNLEISNFVVSSLNKISLNSGNSTIIKNINIGTLI 116
>UniRef50_Q4S2E6 Cluster: Chromosome 17 SCAF14762, whole genome
shotgun sequence; n=2; Eumetazoa|Rep: Chromosome 17
SCAF14762, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 259
Score = 34.7 bits (76), Expect = 1.3
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 5/78 (6%)
Frame = +2
Query: 299 VKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFV----YCGKKA-TLEVG 463
V ++ +DP R A +A+V + RK IA E + G + G+ A + G
Sbjct: 111 VVEVRYDPCRSADIALVAGGN------RKRWIIATENMQAGDVIKTSAVIGRMAVSANEG 164
Query: 464 NVMPVGAMPEGTIVCNLE 517
+ P+GA+P GT+V NLE
Sbjct: 165 DAYPLGALPVGTLVNNLE 182
>UniRef50_A7CUV2 Cluster: Ribosomal protein L2; n=1; Opitutaceae
bacterium TAV2|Rep: Ribosomal protein L2 - Opitutaceae
bacterium TAV2
Length = 288
Score = 34.7 bits (76), Expect = 1.3
Identities = 32/109 (29%), Positives = 49/109 (44%), Gaps = 6/109 (5%)
Frame = +2
Query: 191 RKGAGSVFVSHTKKRKGA--PKL-RSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRD 361
+ G +V+ T +R+G KL R +D+ + V + +DP R A LA++ + +
Sbjct: 39 KTGGRNVYGRITSRRRGGGHKKLYRIIDFRRDLIDVPAEVIALEYDPNRTAHLALLKYEN 98
Query: 362 PYKFKTRKELFIAPEGLYTGQFVYCGKKATLE---VGNVMPVGAMPEGT 499
K IAP GL G + KATL GN P+ +P T
Sbjct: 99 G-----DKRYIIAPLGLKVGAKIVTSNKATLNDYVTGNNYPLSIIPPST 142
>UniRef50_A6YEA9 Cluster: Ribosomal protein L2; n=1; Chlorokybus
atmophyticus|Rep: Ribosomal protein L2 - Chlorokybus
atmophyticus (Soil alga)
Length = 368
Score = 34.3 bits (75), Expect = 1.7
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +2
Query: 395 IAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLE 517
+A L G FV G + GN +P+ ++P GT+V N+E
Sbjct: 199 LASHQLKAGDFVSSGPNVEIRTGNALPLISIPLGTLVHNIE 239
>UniRef50_UPI00003617AD Cluster: 39S ribosomal protein L2,
mitochondrial precursor (L2mt) (MRP-L2).; n=2;
Deuterostomia|Rep: 39S ribosomal protein L2,
mitochondrial precursor (L2mt) (MRP-L2). - Takifugu
rubripes
Length = 255
Score = 33.9 bits (74), Expect = 2.3
Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Frame = +2
Query: 299 VKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKA-TLEVGNVMP 475
V ++ +DP R A +A+V + ++ E A + + T + G+ A + + G+ P
Sbjct: 77 VVEVRYDPCRSADIALVAGGNRKRWIIATENMQAEDIIKTSAVI--GRMAVSAKEGDAYP 134
Query: 476 VGAMPEGTIVCNLE 517
+GA+P GT+V NLE
Sbjct: 135 LGALPVGTLVNNLE 148
>UniRef50_A7PXN3 Cluster: Chromosome chr12 scaffold_36, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr12 scaffold_36, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 166
Score = 33.5 bits (73), Expect = 3.0
Identities = 18/56 (32%), Positives = 30/56 (53%)
Frame = -3
Query: 520 LFKIAHNGTLRHSSNRHHISNFKSCFLSTINKLACVEPFGSNEELLPCLELVWIAE 353
+ +AHNGTL S R +I+N + L+ +++L V +E+L L +AE
Sbjct: 25 VLNVAHNGTLGDGSKRQNIANNEIGLLAIVDELVGVHALDGDEQLFLMLVPEGMAE 80
>UniRef50_Q5T653 Cluster: 39S ribosomal protein L2, mitochondrial
precursor; n=24; Euteleostomi|Rep: 39S ribosomal protein
L2, mitochondrial precursor - Homo sapiens (Human)
Length = 305
Score = 33.5 bits (73), Expect = 3.0
Identities = 28/104 (26%), Positives = 48/104 (46%), Gaps = 5/104 (4%)
Frame = +2
Query: 221 HTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIA 400
H ++ + LR + G + V + +DP R A +A+V +RK IA
Sbjct: 100 HKQRYRMIDFLRFRPEETKSGPFEEKVIQVRYDPCRSADIALV------AGGSRKRWIIA 153
Query: 401 PEGLYTGQFV----YCGKKATL-EVGNVMPVGAMPEGTIVCNLE 517
E + G + + G+ A G+ P+GA+P GT++ N+E
Sbjct: 154 TENMQAGDTILNSNHIGRMAVAAREGDAHPLGALPVGTLINNVE 197
>UniRef50_P46763 Cluster: Mitochondrial 60S ribosomal protein L2;
n=1; Acanthamoeba castellanii|Rep: Mitochondrial 60S
ribosomal protein L2 - Acanthamoeba castellanii (Amoeba)
Length = 253
Score = 33.5 bits (73), Expect = 3.0
Identities = 22/88 (25%), Positives = 41/88 (46%)
Frame = +2
Query: 254 RSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVY 433
R +DY I G V + +DP R + +A++ + + +APEGL G ++
Sbjct: 44 RLIDYKRYIWNIFGFVHRVEYDPKRNSLIALIVYSNGVM-----SYILAPEGLLVGDCIF 98
Query: 434 CGKKATLEVGNVMPVGAMPEGTIVCNLE 517
+ L+ GN + +P G + ++E
Sbjct: 99 AKENIVLKPGNSTYLQHIPIGLKINSIE 126
>UniRef50_Q7YN79 Cluster: Ribosomal protein L2; n=1; Eimeria
tenella|Rep: Ribosomal protein L2 - Eimeria tenella
Length = 273
Score = 33.1 bits (72), Expect = 4.0
Identities = 11/33 (33%), Positives = 22/33 (66%)
Frame = +2
Query: 419 GQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLE 517
G +Y G+ L++GN++P+ +P G+ + N+E
Sbjct: 109 GDIIYIGETIELKIGNILPIKKIPCGSWIHNIE 141
>UniRef50_Q0C283 Cluster: Conserved domain protein; n=1; Hyphomonas
neptunium ATCC 15444|Rep: Conserved domain protein -
Hyphomonas neptunium (strain ATCC 15444)
Length = 279
Score = 32.3 bits (70), Expect = 6.9
Identities = 24/78 (30%), Positives = 32/78 (41%), Gaps = 3/78 (3%)
Frame = +2
Query: 233 RKGAPKLRSLDYAERHGYIKGVVKDIIH---DPGRGAPLAVVHFRDPYKFKTRKELFIAP 403
R AP+ AE G GV D +H DPG A + H R + R + P
Sbjct: 33 RAAAPRQADRTIAEIAGRSGGVYSDDLHAARDPGASAAFRLAHKRRLEALRMRGVVTRRP 92
Query: 404 EGLYTGQFVYCGKKATLE 457
+G + Y + ATLE
Sbjct: 93 DGTWDVPADYLERAATLE 110
>UniRef50_Q5EDE3 Cluster: DC1 domain-containing protein; n=11;
Arabidopsis thaliana|Rep: DC1 domain-containing protein
- Arabidopsis thaliana (Mouse-ear cress)
Length = 692
Score = 32.3 bits (70), Expect = 6.9
Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = -3
Query: 517 FKIAHNGTLRHSSNRH-HISNFKSCFLSTINKLACVEPFGSNEELLPCLELVWI 359
FK + T+ H S+RH H+S K S+ K AC P GS+ L C E +I
Sbjct: 363 FKRNDDNTIDHFSHRHNHMSLDKGGEESSFCK-ACAHPIGSSSSLYKCSECSFI 415
>UniRef50_A6QQ50 Cluster: MAP4K1 protein; n=1; Bos taurus|Rep:
MAP4K1 protein - Bos taurus (Bovine)
Length = 847
Score = 32.3 bits (70), Expect = 6.9
Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Frame = +2
Query: 227 KKRKGAPKLRSLDYAERHGYIKGVVKDII---HDPGRGAPLAVVHFRDP 364
KKR A K+ + + G +G++ D++ +PG+GAP+ + DP
Sbjct: 287 KKRPSATKMLTHQLVSQPGLNRGLILDLLDKLRNPGKGAPVGEIEDEDP 335
>UniRef50_A7AUQ4 Cluster: Mac/perforin domain containing protein;
n=1; Babesia bovis|Rep: Mac/perforin domain containing
protein - Babesia bovis
Length = 752
Score = 32.3 bits (70), Expect = 6.9
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +2
Query: 308 IIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATL 454
I+ DPG A + +H+RD + + FI P+G + + C K T+
Sbjct: 442 ILLDPGYRASVVQMHWRDDAEGLSNSRHFIQPKGAWVRPYTSCHKGETI 490
>UniRef50_Q9MTE5 Cluster: Ribosomal protein L2; n=1; Toxoplasma
gondii|Rep: Ribosomal protein L2 - Toxoplasma gondii
Length = 267
Score = 31.9 bits (69), Expect = 9.2
Identities = 22/71 (30%), Positives = 36/71 (50%)
Frame = +2
Query: 305 DIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGA 484
+II+D R LAV +F K F+ + L G + G KA L++GN +P+
Sbjct: 67 NIIYDSFRRIFLAV-YFIINSIIKNIYRYFLLTKNLKIGSQINFGFKAPLKIGNALPLYK 125
Query: 485 MPEGTIVCNLE 517
+ G+ + N+E
Sbjct: 126 ILLGSFIYNIE 136
>UniRef50_Q2LZ31 Cluster: GA20496-PA; n=2; Diptera|Rep: GA20496-PA -
Drosophila pseudoobscura (Fruit fly)
Length = 297
Score = 31.9 bits (69), Expect = 9.2
Identities = 24/75 (32%), Positives = 38/75 (50%)
Frame = +2
Query: 296 VVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMP 475
+V +I+HD R A +A+V D K+ E A + L T + + E G+ P
Sbjct: 110 LVVEILHDGCRTAKVALVAVGDELKYILATENMKAGDVLKTSRVIPRIPVRPNE-GDAYP 168
Query: 476 VGAMPEGTIVCNLEE 520
+GA+P GT + LE+
Sbjct: 169 LGALPVGTRIHCLEK 183
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 499,854,327
Number of Sequences: 1657284
Number of extensions: 9785657
Number of successful extensions: 23258
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 22724
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23242
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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