Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12p19f
(522 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT007379-1|AAP36043.1| 257|Homo sapiens ribosomal protein L8 pr... 205 6e-53
BC013104-1|AAH13104.1| 257|Homo sapiens ribosomal protein L8 pr... 205 6e-53
BC012197-1|AAH12197.1| 257|Homo sapiens ribosomal protein L8 pr... 205 6e-53
Z28407-1|CAA82248.1| 257|Homo sapiens ribosomal protein L8 prot... 205 8e-53
CR457046-1|CAG33327.1| 257|Homo sapiens RPL8 protein. 205 8e-53
BC093064-1|AAH93064.1| 257|Homo sapiens ribosomal protein L8 pr... 205 8e-53
BC000077-1|AAH00077.1| 257|Homo sapiens ribosomal protein L8 pr... 205 8e-53
AB061821-1|BAB79459.1| 257|Homo sapiens ribosomal protein L8 pr... 205 8e-53
AB007168-1|BAA25829.1| 130|Homo sapiens ribosomal protein L8 pr... 197 2e-50
BC000047-1|AAH00047.2| 211|Homo sapiens RPL8 protein protein. 130 4e-30
BC020212-1|AAH20212.1| 305|Homo sapiens mitochondrial ribosomal... 33 0.46
BC013685-1|AAH13685.1| 305|Homo sapiens mitochondrial ribosomal... 33 0.46
AF132956-1|AAD27731.1| 353|Homo sapiens CGI-22 protein protein. 33 0.46
AL355385-2|CAI13780.1| 302|Homo sapiens protein ( Human DNA seq... 30 4.3
AB209603-1|BAD92840.1| 337|Homo sapiens amyloid beta (A4) precu... 29 9.9
>BT007379-1|AAP36043.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 205 bits (501), Expect = 6e-53
Identities = 94/118 (79%), Positives = 104/118 (88%)
Frame = +2
Query: 167 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 346
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 347 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEE 520
V FRDPY+FK R ELFIA EG++TGQFVYCGKKA L VGNV+PVG MPEGTIVC LEE
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNVGNVLPVGTMPEGTIVCCLEE 118
>BC013104-1|AAH13104.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 205 bits (501), Expect = 6e-53
Identities = 94/118 (79%), Positives = 104/118 (88%)
Frame = +2
Query: 167 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 346
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 347 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEE 520
V FRDPY+FK R ELFIA EG++TGQFVYCGKKA L VGNV+PVG MPEGTIVC LEE
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNVGNVLPVGTMPEGTIVCCLEE 118
>BC012197-1|AAH12197.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 205 bits (501), Expect = 6e-53
Identities = 94/118 (79%), Positives = 104/118 (88%)
Frame = +2
Query: 167 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 346
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 347 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEE 520
V FRDPY+FK R ELFIA EG++TGQFVYCGKKA L VGNV+PVG MPEGTIVC LEE
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNVGNVLPVGTMPEGTIVCCLEE 118
>Z28407-1|CAA82248.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 205 bits (500), Expect = 8e-53
Identities = 93/118 (78%), Positives = 104/118 (88%)
Frame = +2
Query: 167 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 346
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 347 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEE 520
V FRDPY+FK R ELFIA EG++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEE
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEE 118
>CR457046-1|CAG33327.1| 257|Homo sapiens RPL8 protein.
Length = 257
Score = 205 bits (500), Expect = 8e-53
Identities = 93/118 (78%), Positives = 104/118 (88%)
Frame = +2
Query: 167 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 346
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 347 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEE 520
V FRDPY+FK R ELFIA EG++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEE
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEE 118
>BC093064-1|AAH93064.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 205 bits (500), Expect = 8e-53
Identities = 93/118 (78%), Positives = 104/118 (88%)
Frame = +2
Query: 167 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 346
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 347 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEE 520
V FRDPY+FK R ELFIA EG++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEE
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEE 118
>BC000077-1|AAH00077.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 205 bits (500), Expect = 8e-53
Identities = 93/118 (78%), Positives = 104/118 (88%)
Frame = +2
Query: 167 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 346
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 347 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEE 520
V FRDPY+FK R ELFIA EG++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEE
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEE 118
>AB061821-1|BAB79459.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 205 bits (500), Expect = 8e-53
Identities = 93/118 (78%), Positives = 104/118 (88%)
Frame = +2
Query: 167 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 346
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 347 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEE 520
V FRDPY+FK R ELFIA EG++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEE
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEE 118
>AB007168-1|BAA25829.1| 130|Homo sapiens ribosomal protein L8
protein.
Length = 130
Score = 197 bits (480), Expect = 2e-50
Identities = 89/114 (78%), Positives = 100/114 (87%)
Frame = +2
Query: 179 IRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFR 358
IR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA V FR
Sbjct: 1 IRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFR 60
Query: 359 DPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEE 520
DPY+FK R ELFIA EG++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEE
Sbjct: 61 DPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEE 114
>BC000047-1|AAH00047.2| 211|Homo sapiens RPL8 protein protein.
Length = 211
Score = 130 bits (313), Expect = 4e-30
Identities = 58/72 (80%), Positives = 63/72 (87%)
Frame = +2
Query: 305 DIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGA 484
DIIHDPGRGAPLA V FRDPY+FK R ELFIA EG++TGQFVYCGKKA L +GNV+PVG
Sbjct: 1 DIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGT 60
Query: 485 MPEGTIVCNLEE 520
MPEGTIVC LEE
Sbjct: 61 MPEGTIVCCLEE 72
>BC020212-1|AAH20212.1| 305|Homo sapiens mitochondrial ribosomal
protein L2 protein.
Length = 305
Score = 33.5 bits (73), Expect = 0.46
Identities = 28/104 (26%), Positives = 48/104 (46%), Gaps = 5/104 (4%)
Frame = +2
Query: 221 HTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIA 400
H ++ + LR + G + V + +DP R A +A+V +RK IA
Sbjct: 100 HKQRYRMIDFLRFRPEETKSGPFEEKVIQVRYDPCRSADIALV------AGGSRKRWIIA 153
Query: 401 PEGLYTGQFV----YCGKKATL-EVGNVMPVGAMPEGTIVCNLE 517
E + G + + G+ A G+ P+GA+P GT++ N+E
Sbjct: 154 TENMQAGDTILNSNHIGRMAVAAREGDAHPLGALPVGTLINNVE 197
>BC013685-1|AAH13685.1| 305|Homo sapiens mitochondrial ribosomal
protein L2 protein.
Length = 305
Score = 33.5 bits (73), Expect = 0.46
Identities = 28/104 (26%), Positives = 48/104 (46%), Gaps = 5/104 (4%)
Frame = +2
Query: 221 HTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIA 400
H ++ + LR + G + V + +DP R A +A+V +RK IA
Sbjct: 100 HKQRYRMIDFLRFRPEETKSGPFEEKVIQVRYDPCRSADIALV------AGGSRKRWIIA 153
Query: 401 PEGLYTGQFV----YCGKKATL-EVGNVMPVGAMPEGTIVCNLE 517
E + G + + G+ A G+ P+GA+P GT++ N+E
Sbjct: 154 TENMQAGDTILNSNHIGRMAVAAREGDAHPLGALPVGTLINNVE 197
>AF132956-1|AAD27731.1| 353|Homo sapiens CGI-22 protein protein.
Length = 353
Score = 33.5 bits (73), Expect = 0.46
Identities = 28/104 (26%), Positives = 48/104 (46%), Gaps = 5/104 (4%)
Frame = +2
Query: 221 HTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIA 400
H ++ + LR + G + V + +DP R A +A+V +RK IA
Sbjct: 100 HKQRYRMIDFLRFRPEETKSGPFEEKVIQVRYDPCRSADIALV------AGGSRKRWIIA 153
Query: 401 PEGLYTGQFV----YCGKKATL-EVGNVMPVGAMPEGTIVCNLE 517
E + G + + G+ A G+ P+GA+P GT++ N+E
Sbjct: 154 TENMQAGDTILNSNHIGRMAVAAREGDAHPLGALPVGTLINNVE 197
>AL355385-2|CAI13780.1| 302|Homo sapiens protein ( Human DNA
sequence from clone RP11-387M24 on chromosome 6 Contains
the 5' end of a gene for a novel protein (KIAA0076
KIAA0708), the ).
Length = 302
Score = 30.3 bits (65), Expect = 4.3
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 5/52 (9%)
Frame = +2
Query: 377 TRKELFIAPEGLYTGQFV----YCGKKATL-EVGNVMPVGAMPEGTIVCNLE 517
+RK IA E + G + + G+ A G+ P+GA+P GT++ N+E
Sbjct: 143 SRKRWIIATENMQAGDTILNSNHIGRMAVAAREGDAHPLGALPVGTLINNVE 194
>AB209603-1|BAD92840.1| 337|Homo sapiens amyloid beta (A4)
precursor protein-binding, family A, member 3 variant
protein.
Length = 337
Score = 29.1 bits (62), Expect = 9.9
Identities = 15/53 (28%), Positives = 20/53 (37%)
Frame = +1
Query: 310 NP*PW*RCTFGCCTLPRSIQVQDKEGALHCSRRALHRPICLLWKESNS*SWKC 468
+P P RC C LP +Q + C P+CL + SW C
Sbjct: 268 SPRPMARCISRRCQLPHIASLQARSSPCTCDHLIPCLPLCLRLHGPGAPSWAC 320
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,691,028
Number of Sequences: 237096
Number of extensions: 1509974
Number of successful extensions: 2487
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 2367
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2487
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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