Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12p18f
         (609 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    25   0.50 
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    21   6.1  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   6.1  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    21   8.1  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 25.0 bits (52), Expect = 0.50
 Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 7/59 (11%)
 Frame = -1

Query: 252 MLKLVGAAFLMLIVVCSYLK--KYFQFRCT-----VSLTN*KVTIIYKVSKMMRKIHLF 97
           M+ + G  ++  + +C+ +   K+ +F        V L + ++ I YK  K   KIHLF
Sbjct: 723 MIAVSGLVYIATVWICTLMNRCKFSEFMTKLLEFDVKLQSDRLMIDYKTQKTGSKIHLF 781


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = -3

Query: 400 AIRLVFSFFDSVCRCLNVCEFCVRFAGSSL 311
           A++L F F+ +   C+ VC F  ++   +L
Sbjct: 149 AVQLYFQFYYTYFLCVIVCIFRGKYRNINL 178


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 7/20 (35%), Positives = 10/20 (50%)
 Frame = -2

Query: 116 CVKYIYLAQDFFTCLFTFVR 57
           C+ Y Y A     C++ F R
Sbjct: 284 CIYYFYCALIILLCIYYFCR 303


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = -3

Query: 397 IRLVFSFFDSVCRCLNVCEFCVRFAGSS 314
           I  +FSF   + R L+V E C R    S
Sbjct: 389 INFMFSFGFILLRFLSVFESCTRLNNES 416


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,979
Number of Sequences: 336
Number of extensions: 2570
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15457268
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)