Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12p18f
         (609 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011070-1|AAR31141.1|  760|Drosophila melanogaster GH11047p pro...    49   4e-06
AE014296-3656|AAF51810.3|  757|Drosophila melanogaster CG12673-P...    49   4e-06
BT003272-1|AAO25029.1| 1109|Drosophila melanogaster LD16921p pro...    29   3.8  
AE014296-1852|AAF50133.2| 1149|Drosophila melanogaster CG7958-PB...    29   3.8  
AE014296-1851|AAF50134.3| 1135|Drosophila melanogaster CG7958-PA...    29   3.8  
AE014296-2117|AAF49940.1|  289|Drosophila melanogaster CG17144-P...    28   8.7  

>BT011070-1|AAR31141.1|  760|Drosophila melanogaster GH11047p
           protein.
          Length = 760

 Score = 49.2 bits (112), Expect = 4e-06
 Identities = 22/47 (46%), Positives = 30/47 (63%)
 Frame = +3

Query: 465 IWAHSERLDQNGDVVLRWVYSDSSITFRLEARTLGYVGLGFNTVGNM 605
           IW H+  +D N D  + W   +  ITF ++ARTLGYVG GF+  GN+
Sbjct: 108 IWDHA--IDLNDDFRILWQIINQDITFEIQARTLGYVGFGFSPDGNL 152


>AE014296-3656|AAF51810.3|  757|Drosophila melanogaster CG12673-PA
           protein.
          Length = 757

 Score = 49.2 bits (112), Expect = 4e-06
 Identities = 22/47 (46%), Positives = 30/47 (63%)
 Frame = +3

Query: 465 IWAHSERLDQNGDVVLRWVYSDSSITFRLEARTLGYVGLGFNTVGNM 605
           IW H+  +D N D  + W   +  ITF ++ARTLGYVG GF+  GN+
Sbjct: 108 IWDHA--IDLNDDFRILWQIINQDITFEIQARTLGYVGFGFSPDGNL 152


>BT003272-1|AAO25029.1| 1109|Drosophila melanogaster LD16921p
           protein.
          Length = 1109

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 14/68 (20%), Positives = 30/68 (44%)
 Frame = +3

Query: 297 QLIQPNELPANLTQNSQTLRHRQTESKNEKTSRIADQYRQRHRRDVFDSTSYESSLIWAH 476
           Q+  P      + Q     +  Q +  N++  +   QY+Q+H+RD F +   +       
Sbjct: 16  QISPPGATTVGVEQQQHLQQQHQQQYYNQQQQQQQQQYQQQHQRDNFLAYQQQQQQQQQQ 75

Query: 477 SERLDQNG 500
            ++L ++G
Sbjct: 76  QQQLQRSG 83


>AE014296-1852|AAF50133.2| 1149|Drosophila melanogaster CG7958-PB,
           isoform B protein.
          Length = 1149

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 14/68 (20%), Positives = 30/68 (44%)
 Frame = +3

Query: 297 QLIQPNELPANLTQNSQTLRHRQTESKNEKTSRIADQYRQRHRRDVFDSTSYESSLIWAH 476
           Q+  P      + Q     +  Q +  N++  +   QY+Q+H+RD F +   +       
Sbjct: 56  QISPPGATTVGVEQQQHLQQQHQQQYYNQQQQQQQQQYQQQHQRDNFLAYQQQQQQQQQQ 115

Query: 477 SERLDQNG 500
            ++L ++G
Sbjct: 116 QQQLQRSG 123


>AE014296-1851|AAF50134.3| 1135|Drosophila melanogaster CG7958-PA,
           isoform A protein.
          Length = 1135

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 14/68 (20%), Positives = 30/68 (44%)
 Frame = +3

Query: 297 QLIQPNELPANLTQNSQTLRHRQTESKNEKTSRIADQYRQRHRRDVFDSTSYESSLIWAH 476
           Q+  P      + Q     +  Q +  N++  +   QY+Q+H+RD F +   +       
Sbjct: 42  QISPPGATTVGVEQQQHLQQQHQQQYYNQQQQQQQQQYQQQHQRDNFLAYQQQQQQQQQQ 101

Query: 477 SERLDQNG 500
            ++L ++G
Sbjct: 102 QQQLQRSG 109


>AE014296-2117|AAF49940.1|  289|Drosophila melanogaster CG17144-PA
           protein.
          Length = 289

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
 Frame = +3

Query: 279 KLPRFRQLIQPNELPANLTQNSQTLRHRQTESKNEKTSRIADQYRQRH--RRDVFD--ST 446
           ++  F++    N L A L  N   L      +   +T+  A QYR RH  +R + +  + 
Sbjct: 4   RIASFQEDRNSNSL-AQLVDNEIPLVQMDIPAYTHQTATQARQYRHRHHKQRQICNGGTV 62

Query: 447 SYESSLIWAHSERLDQNGDVVL 512
           SYE+ L  A SE    + DVV+
Sbjct: 63  SYENQLANASSEDELDDPDVVV 84


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,954,490
Number of Sequences: 53049
Number of extensions: 465413
Number of successful extensions: 1346
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1301
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1341
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2503659279
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)