Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12p15f
         (618 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          31   0.039
Y17704-1|CAA76824.2|  401|Anopheles gambiae hypothetical protein...    24   3.4  
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            24   4.5  
AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeot...    24   4.5  
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           23   6.0  

>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 30.7 bits (66), Expect = 0.039
 Identities = 16/46 (34%), Positives = 25/46 (54%)
 Frame = +1

Query: 208 GMDSDDHRRTREHLRGYGQLLRSA*RRHSSVQASQQHPPEHDQKDQ 345
           G D DD+RRT +  RG G+  +    RHS   +S +H     ++D+
Sbjct: 606 GYDRDDYRRTEKDYRGNGKHDKYGSSRHS--DSSSRHRSSKHERDR 649


>Y17704-1|CAA76824.2|  401|Anopheles gambiae hypothetical protein
           protein.
          Length = 401

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = +3

Query: 537 DRKKLRRTCETSPRSSSGLVR 599
           + +KLRRT E + +SS+ LVR
Sbjct: 337 ETEKLRRTVEQTGKSSAELVR 357


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
 Frame = -3

Query: 493 LQADHDGVEILS---LPQVDSLKSFLCRYTQLSCGFEESVDILHALE 362
           LQ DH+ +  L+      +DSLK    +Y +++     + D LH L+
Sbjct: 845 LQLDHNLLTALNGFEFEGLDSLKELFLQYNRIASIANHTFDHLHGLK 891


>AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeotic
           protein protein.
          Length = 308

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = +1

Query: 217 SDDHRRTREHL-RGYGQLLRSA*RRHSSVQASQQH 318
           ++  RR RE   +   + L+SA + HS  QA Q+H
Sbjct: 204 NEQARREREEQDKMKNESLKSAQQHHSQKQAQQEH 238


>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 23.4 bits (48), Expect = 6.0
 Identities = 12/47 (25%), Positives = 23/47 (48%)
 Frame = +1

Query: 220  DDHRRTREHLRGYGQLLRSA*RRHSSVQASQQHPPEHDQKDQHIVDG 360
            +D RRT E  + + +  R+  +R+   Q +   PP   ++   + DG
Sbjct: 1103 EDERRTEERRQLHNEANRAYRQRNRRSQPTPPAPPPTPREAARLEDG 1149


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 718,235
Number of Sequences: 2352
Number of extensions: 15168
Number of successful extensions: 31
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 60553008
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)