Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12p14r
         (719 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    29   0.038
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    24   1.1  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    24   1.4  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    24   1.4  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   3.3  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    22   4.4  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    22   4.4  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     22   4.4  

>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 29.1 bits (62), Expect = 0.038
 Identities = 17/56 (30%), Positives = 28/56 (50%)
 Frame = -1

Query: 536 DGYCHVDNVTAVTSITGWVNVTTNDEKALKLAIFKHGPISVAIDASHKSFSFYANG 369
           DG    DN+ A +SIT W+ ++  D + L + I  +G     +DAS       ++G
Sbjct: 223 DGEWQRDNLNANSSITHWI-LSGADPQKLAIGIAFYGHAFTLVDASQHDLGSPSSG 277


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = +1

Query: 616 PPSQPLFPKPQEQSMSACWLSRT 684
           PPS P++  P+  +  A W+  +
Sbjct: 104 PPSNPIYIHPESPNFGAHWMKES 126


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +1

Query: 613 SPPSQPLFPKPQEQSMSACWL 675
           S P+  LF + Q QSM  CW+
Sbjct: 176 SLPTVFLFEEKQVQSMPQCWI 196


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 9/35 (25%), Positives = 16/35 (45%)
 Frame = -1

Query: 560 DYGGYLGQDGYCHVDNVTAVTSITGWVNVTTNDEK 456
           D G Y G+ G    + +    +  GW  V  +++K
Sbjct: 290 DAGRYTGERGMMGYNEIVEAQNAGGWTTVWDDEQK 324


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 12/37 (32%), Positives = 16/37 (43%)
 Frame = -2

Query: 658 STAPGVSGTTAATEARTSGPTSGLRGTASPQRKTTED 548
           S  P  + + A  E   + PT G   T S  R  +ED
Sbjct: 36  SMTPNSAASPAPPEEEAASPTPGDVPTPSSPRSISED 72


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 12/40 (30%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
 Frame = +3

Query: 270 EPVLLAVE--DAVADRQHRVVQLLNFVLAIRFKIHSVRVE 383
           +P+    E  D + D+  R V  ++    +RF  H+ RVE
Sbjct: 458 QPIYFVAESFDDMKDKFRRWVSAMSRPFEVRFNPHTGRVE 497


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +1

Query: 232 PSFPHMFDQEFLMSQYFLPLR 294
           PSF H+F  +++ SQ F   R
Sbjct: 143 PSFIHVFPDKYVDSQVFARAR 163


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -2

Query: 703 CTTADTWSGSASRRS 659
           CTTA +W G   +R+
Sbjct: 31  CTTASSWPGRPPKRA 45


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,979
Number of Sequences: 336
Number of extensions: 2867
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19155320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)