Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12p14f
         (584 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    27   0.12 
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    25   0.62 
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    24   1.1  
AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochr...    24   1.1  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    23   1.9  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   2.5  
AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    22   4.4  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    22   4.4  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   4.4  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   4.4  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    21   5.8  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    21   5.8  

>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 27.1 bits (57), Expect = 0.12
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = -3

Query: 408 CWLSRTRCPPLCRNSAPSTAPTVPNDQHEPHTD*SLTGVTAPN 280
           CW   +  PP  + SA  T    PN  ++P T  +LT +T P+
Sbjct: 323 CWSLTSSPPPPYQISAQPTPSQSPNQIYQPVT--NLTNLTYPS 363



 Score = 24.2 bits (50), Expect = 0.82
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = -3

Query: 459 PPSQPLFPKPQEQSMSACWLSRT 391
           PPS P++  P+  +  A W+  +
Sbjct: 104 PPSNPIYIHPESPNFGAHWMKES 126


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 24.6 bits (51), Expect = 0.62
 Identities = 13/21 (61%), Positives = 14/21 (66%), Gaps = 1/21 (4%)
 Frame = +2

Query: 17  RQY-ASDLEHEKRLNIFRQSL 76
           R Y ASDLE E RL  FR+ L
Sbjct: 181 RDYTASDLEEEHRLAYFREDL 201


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -3

Query: 462 SPPSQPLFPKPQEQSMSACWL 400
           S P+  LF + Q QSM  CW+
Sbjct: 176 SLPTVFLFEEKQVQSMPQCWI 196


>AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 125

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -3

Query: 129 FTDMVKPRFARLLECMYLSDCLK 61
           F+D  KP +  L E  Y+  C+K
Sbjct: 30  FSDDTKPDYKSLQELKYMERCIK 52


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = +3

Query: 132 ILPIALTTSSPPSEGGGTRGPALTVSRSRTANL 230
           +LP+A   +SPPS    +  PAL   +    N+
Sbjct: 61  LLPLAWQANSPPSPPAPSELPALKSRKLNNNNV 93


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 12/37 (32%), Positives = 16/37 (43%)
 Frame = +3

Query: 417 STAPGVSGTTAATEARTSGPTSGLRGTASPQRKTTED 527
           S  P  + + A  E   + PT G   T S  R  +ED
Sbjct: 36  SMTPNSAASPAPPEEEAASPTPGDVPTPSSPRSISED 72


>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 10/38 (26%), Positives = 19/38 (50%)
 Frame = +2

Query: 311 SVCGSCWSFGTVGAVEGALFLHNGGHLVRLSQQALIDC 424
           + CG     G+ G V   +F +  GH ++ + + +I C
Sbjct: 186 AACGRIHPIGSGGMVWYQMFEYAVGHWMQKATEHVIGC 223


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 10/38 (26%), Positives = 19/38 (50%)
 Frame = +2

Query: 311 SVCGSCWSFGTVGAVEGALFLHNGGHLVRLSQQALIDC 424
           + CG     G+ G V   +F +  GH ++ + + +I C
Sbjct: 500 AACGRIHPIGSGGMVWYQMFEYAVGHWMQKATEHVIGC 537


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 10/38 (26%), Positives = 19/38 (50%)
 Frame = +2

Query: 311 SVCGSCWSFGTVGAVEGALFLHNGGHLVRLSQQALIDC 424
           + CG     G+ G V   +F +  GH ++ + + +I C
Sbjct: 733 AACGRIHPIGSGGMVWYQMFEYAVGHWMQKATEHVIGC 770


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 10/38 (26%), Positives = 19/38 (50%)
 Frame = +2

Query: 311 SVCGSCWSFGTVGAVEGALFLHNGGHLVRLSQQALIDC 424
           + CG     G+ G V   +F +  GH ++ + + +I C
Sbjct: 733 AACGRIHPIGSGGMVWYQMFEYAVGHWMQKATEHVIGC 770


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -3

Query: 123 DMVKPRFARLLECMYLSDCLKMFS 52
           DM +    RLL C  +S C+ +F+
Sbjct: 212 DMGEFLLYRLLRCWLISKCIYVFN 235


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -3

Query: 123 DMVKPRFARLLECMYLSDCLKMFS 52
           DM +    RLL C  +S C+ +F+
Sbjct: 212 DMGEFLLYRLLRCWLISKCIYVFN 235


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,116
Number of Sequences: 336
Number of extensions: 2556
Number of successful extensions: 15
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14621740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)