Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12p11f
(447 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62266 Cluster: 40S ribosomal protein S23; n=141; cellu... 228 5e-59
UniRef50_P32827 Cluster: 40S ribosomal protein S23; n=66; cellul... 203 2e-51
UniRef50_Q8ZYQ4 Cluster: 30S ribosomal protein S12P; n=17; Archa... 144 1e-33
UniRef50_Q0W8G5 Cluster: 30S ribosomal protein S12P; n=20; cellu... 141 7e-33
UniRef50_Q5AAQ9 Cluster: Putative uncharacterized protein; n=1; ... 124 1e-27
UniRef50_Q8S6I4 Cluster: Putative 40s ribosomal protein S23; n=4... 119 3e-26
UniRef50_Q8H6J0 Cluster: Putative 40S ribosomal protein; n=1; Ze... 90 2e-17
UniRef50_A3H7W0 Cluster: Protein splicing (Intein) site; n=4; ce... 90 2e-17
UniRef50_UPI00004CC6C0 Cluster: PREDICTED: hypothetical protein;... 76 3e-13
UniRef50_UPI00015B40B9 Cluster: PREDICTED: similar to mitochondr... 66 3e-10
UniRef50_Q7SZ18 Cluster: Mrps12-prov protein; n=8; Euteleostomi|... 63 2e-09
UniRef50_Q1HPJ4 Cluster: Mitochondrial ribosomal protein S12; n=... 63 2e-09
UniRef50_O70089 Cluster: 30S ribosomal protein S12; n=35; cellul... 63 3e-09
UniRef50_Q1PPX2 Cluster: Em1-tg19B; n=1; Euplotes aediculatus|Re... 60 2e-08
UniRef50_A5DX89 Cluster: 30S ribosomal protein S12; n=6; Sacchar... 60 2e-08
UniRef50_Q9NEH6 Cluster: EG:BACH59J11.1 protein; n=2; Bilateria|... 58 7e-08
UniRef50_P10735 Cluster: 40S ribosomal protein S12, mitochondria... 58 7e-08
UniRef50_Q5K6X0 Cluster: Ribosomal protein S12, putative; n=2; D... 58 9e-08
UniRef50_UPI0000D55D7C Cluster: PREDICTED: similar to 40S riboso... 56 3e-07
UniRef50_Q8BGG2 Cluster: Adult male spinal cord cDNA, RIKEN full... 54 1e-06
UniRef50_O15235 Cluster: 28S ribosomal protein S12, mitochondria... 54 1e-06
UniRef50_P14149 Cluster: Chloroplast 30S ribosomal protein S12; ... 54 2e-06
UniRef50_A3B198 Cluster: Putative uncharacterized protein; n=1; ... 51 1e-05
UniRef50_Q9XTY5 Cluster: Putative uncharacterized protein; n=2; ... 51 1e-05
UniRef50_Q9TMN0 Cluster: Apicoplast 30S ribosomal protein S12; n... 50 2e-05
UniRef50_P53732 Cluster: 37S ribosomal protein S12, mitochondria... 50 2e-05
UniRef50_O14182 Cluster: Mitochondrial ribosomal protein subunit... 49 5e-05
UniRef50_Q2H267 Cluster: Putative uncharacterized protein; n=1; ... 47 2e-04
UniRef50_Q92J95 Cluster: 30S ribosomal protein S12; n=15; cellul... 47 2e-04
UniRef50_A7S120 Cluster: Predicted protein; n=1; Nematostella ve... 47 2e-04
UniRef50_A7AXG1 Cluster: Rps12; n=1; Babesia bovis|Rep: Rps12 - ... 46 4e-04
UniRef50_A6QU96 Cluster: Predicted protein; n=1; Ajellomyces cap... 46 4e-04
UniRef50_P48858 Cluster: Mitochondrial ribosomal protein S12; n=... 46 4e-04
UniRef50_P46759 Cluster: Mitochondrial ribosomal protein S12; n=... 46 5e-04
UniRef50_P92532 Cluster: Mitochondrial ribosomal protein S12; n=... 44 0.001
UniRef50_Q01607 Cluster: 40S ribosomal protein S12, mitochondria... 44 0.002
UniRef50_A7AR95 Cluster: Ribosomal protein S12, putative; n=1; B... 42 0.008
UniRef50_Q4MYA6 Cluster: Ribosomal protein S12, putative; n=1; T... 41 0.011
UniRef50_Q0QIR5 Cluster: Ribosomal protein S12; n=1; Oltmannsiel... 41 0.014
UniRef50_A7R6Q2 Cluster: Chromosome undetermined scaffold_1375, ... 39 0.057
UniRef50_Q6VEC9 Cluster: Ribosomal protein S12; n=1; Emiliania h... 38 0.13
UniRef50_P15755 Cluster: Mitochondrial ribosomal protein S12; n=... 36 0.40
UniRef50_UPI000049A59F Cluster: ankyrin repeat protein; n=1; Ent... 35 0.92
UniRef50_Q6R9M1 Cluster: Putative uncharacterized protein orf127... 35 0.92
UniRef50_Q11EN9 Cluster: Putative uncharacterized protein; n=1; ... 32 4.9
UniRef50_Q02505 Cluster: Mucin-3A precursor; n=25; Eutheria|Rep:... 32 4.9
UniRef50_A4H5P4 Cluster: Putative uncharacterized protein; n=1; ... 32 6.5
>UniRef50_P62266 Cluster: 40S ribosomal protein S23; n=141; cellular
organisms|Rep: 40S ribosomal protein S23 - Homo sapiens
(Human)
Length = 143
Score = 228 bits (557), Expect = 5e-59
Identities = 109/116 (93%), Positives = 111/116 (95%)
Frame = +2
Query: 2 KKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPR 181
KKAH+GT KANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKK+TAFVP
Sbjct: 28 KKAHLGTALKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPN 87
Query: 182 DGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKEKKERPRS 349
DGCLN IEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYK KKERPRS
Sbjct: 88 DGCLNFIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKGKKERPRS 143
>UniRef50_P32827 Cluster: 40S ribosomal protein S23; n=66; cellular
organisms|Rep: 40S ribosomal protein S23 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 145
Score = 203 bits (495), Expect = 2e-51
Identities = 94/116 (81%), Positives = 108/116 (93%)
Frame = +2
Query: 2 KKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPR 181
KK +GT +K++PFGG+SHAKGIVLEK+G+E+KQPNSAIRKCVRVQLIKNGKKVTAFVP
Sbjct: 30 KKRLLGTAFKSSPFGGSSHAKGIVLEKLGIESKQPNSAIRKCVRVQLIKNGKKVTAFVPN 89
Query: 182 DGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKEKKERPRS 349
DGCLN ++ENDEVL+AGFGRKG A GDIPGVRFKVVKV+ VSLLAL+KEKKE+PRS
Sbjct: 90 DGCLNFVDENDEVLLAGFGRKGKAKGDIPGVRFKVVKVSGVSLLALWKEKKEKPRS 145
>UniRef50_Q8ZYQ4 Cluster: 30S ribosomal protein S12P; n=17;
Archaea|Rep: 30S ribosomal protein S12P - Pyrobaculum
aerophilum
Length = 147
Score = 144 bits (348), Expect = 1e-33
Identities = 69/115 (60%), Positives = 91/115 (79%), Gaps = 1/115 (0%)
Frame = +2
Query: 2 KKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPR 181
K+ +G K +P GA A+GIVLEKVGVEA++PN+A+RKCVRVQL+KNGK VTAFVP
Sbjct: 31 KRKMLGLVEKYDPLEGAPMARGIVLEKVGVEARKPNAAVRKCVRVQLVKNGKVVTAFVPL 90
Query: 182 DGCLNHIEENDEVLVAGF-GRKGHAVGDIPGVRFKVVKVANVSLLALYKEKKERP 343
DG LN+I E+DEV++ G +G ++GDIPGVRFKV+KV VSL A+++ KK++P
Sbjct: 91 DGSLNYINEHDEVVIERIGGPEGRSLGDIPGVRFKVIKVNGVSLWAIWRGKKQKP 145
>UniRef50_Q0W8G5 Cluster: 30S ribosomal protein S12P; n=20; cellular
organisms|Rep: 30S ribosomal protein S12P - Uncultured
methanogenic archaeon RC-I
Length = 142
Score = 141 bits (341), Expect = 7e-33
Identities = 67/106 (63%), Positives = 84/106 (79%), Gaps = 1/106 (0%)
Frame = +2
Query: 29 KANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEE 208
KA+P GA AKGIVLEKVGVEAKQPNSAIRKC+R+QLIKNG+++TAF P DG +N I+E
Sbjct: 35 KADPLEGAPQAKGIVLEKVGVEAKQPNSAIRKCIRIQLIKNGRQITAFCPGDGAINFIDE 94
Query: 209 NDEVLVAGF-GRKGHAVGDIPGVRFKVVKVANVSLLALYKEKKERP 343
+DEV + G GR G + GDIPGVRF+V KV +VSL + K+++P
Sbjct: 95 HDEVTIEGIGGRMGGSYGDIPGVRFRVFKVNDVSLEEMVAGKRDKP 140
>UniRef50_Q5AAQ9 Cluster: Putative uncharacterized protein; n=1;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 102
Score = 124 bits (298), Expect = 1e-27
Identities = 60/100 (60%), Positives = 70/100 (70%)
Frame = -1
Query: 357 YTYDLGRSFFSL*RARRDTLATFTTLKRTPGMSPTA*PLRPNPATSTSSFSSMWFRQPSR 178
Y YDLG SFFS +A ++T T TTL TPG+SP A PL P PA TSSFSS F+QPS
Sbjct: 3 YIYDLGFSFFSFHKANKETPETLTTLNLTPGISPLALPLLPKPANKTSSFSSTKFKQPSF 62
Query: 177 GTNAVTFFPFLMSCTRTHLRMAELGCLASTPTFSRTMPFA 58
GT AVTF PFL++ T TH +AE GCL S P FS+T+P A
Sbjct: 63 GTKAVTFLPFLINWTSTHFSIAEFGCLDSIPIFSKTIPLA 102
>UniRef50_Q8S6I4 Cluster: Putative 40s ribosomal protein S23; n=4;
Oryza sativa|Rep: Putative 40s ribosomal protein S23 -
Oryza sativa (Rice)
Length = 301
Score = 119 bits (287), Expect = 3e-26
Identities = 53/73 (72%), Positives = 61/73 (83%)
Frame = +2
Query: 2 KKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPR 181
KK+H G +WK PF G+SHAKGIVLEK+G+EAKQPNSAI KC RVQL+KNGKK+ AFVP
Sbjct: 99 KKSHFGNEWK-KPFAGSSHAKGIVLEKIGIEAKQPNSAICKCARVQLVKNGKKIAAFVPN 157
Query: 182 DGCLNHIEENDEV 220
DGCLN I+EN V
Sbjct: 158 DGCLNFIKENGPV 170
>UniRef50_Q8H6J0 Cluster: Putative 40S ribosomal protein; n=1; Zea
mays|Rep: Putative 40S ribosomal protein - Zea mays
(Maize)
Length = 309
Score = 89.8 bits (213), Expect = 2e-17
Identities = 41/46 (89%), Positives = 45/46 (97%)
Frame = +2
Query: 212 DEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKEKKERPRS 349
DEVL+AGFGRKGHAVGDIPGVRFKVVKV+ VSLLAL+KEKKE+PRS
Sbjct: 224 DEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS 269
>UniRef50_A3H7W0 Cluster: Protein splicing (Intein) site; n=4;
cellular organisms|Rep: Protein splicing (Intein) site -
Caldivirga maquilingensis IC-167
Length = 661
Score = 89.8 bits (213), Expect = 2e-17
Identities = 46/74 (62%), Positives = 54/74 (72%), Gaps = 1/74 (1%)
Frame = +2
Query: 125 CVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGF-GRKGHAVGDIPGVRFKVVKVAN 301
CVRVQL KNGK VTAFVP DG LN I E+DEV++ G +G A GD+PGVRFKV KV
Sbjct: 586 CVRVQLTKNGKVVTAFVPWDGGLNLINEHDEVIIERIGGPEGRAYGDLPGVRFKVTKVNG 645
Query: 302 VSLLALYKEKKERP 343
VSL A+ KK++P
Sbjct: 646 VSLKAILLGKKQKP 659
Score = 55.6 bits (128), Expect = 5e-07
Identities = 27/50 (54%), Positives = 35/50 (70%)
Frame = +2
Query: 2 KKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKN 151
KK +G K +P GA A+GIVLEKVGVEA++PN+A+RKCV + N
Sbjct: 31 KKRALGFIKKYDPLEGAPMARGIVLEKVGVEARKPNAAVRKCVTPDTLIN 80
>UniRef50_UPI00004CC6C0 Cluster: PREDICTED: hypothetical protein;
n=1; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 143
Score = 76.2 bits (179), Expect = 3e-13
Identities = 39/107 (36%), Positives = 62/107 (57%)
Frame = -3
Query: 322 VESEERHVGYFYHLKTNSGNVTDGVTFTTESRH*YXXXXXXXX*ATVTGDECGHFLSVLN 143
++S++R++GYF HLK +S ++T +TF+T+S + + A + G E L VLN
Sbjct: 9 LQSQQRNIGYFNHLKEDSRDITYSMTFSTKSSN-WIIIFLNEVQAAIIGHERCDLLPVLN 67
Query: 142 ELYTDAFADGRVGLLSFYTNFLEDDALCVRCTTERVSLPFRTHVGFL 2
EL+ DA DGR+ L F + ++LC+R +R+ L VGFL
Sbjct: 68 ELHPDALPDGRIWLFGLNPYFFQHNSLCMRGAPKRIGLQGCAQVGFL 114
>UniRef50_UPI00015B40B9 Cluster: PREDICTED: similar to mitochondrial
ribosomal protein S12; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to mitochondrial ribosomal protein
S12 - Nasonia vitripennis
Length = 173
Score = 66.1 bits (154), Expect = 3e-10
Identities = 39/86 (45%), Positives = 58/86 (67%)
Frame = +2
Query: 35 NPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEEND 214
NPF GA AKG+VL+ + + K+PNSA RKCV V+L NGK++TA++P G ++++E++
Sbjct: 83 NPFNGAPFAKGVVLKTLIKKPKKPNSANRKCVLVRL-SNGKEMTAYIP--GIGHNLQEHN 139
Query: 215 EVLVAGFGRKGHAVGDIPGVRFKVVK 292
VL R G D+PGV+ K V+
Sbjct: 140 IVLC----RVGRC-RDVPGVKIKCVR 160
>UniRef50_Q7SZ18 Cluster: Mrps12-prov protein; n=8;
Euteleostomi|Rep: Mrps12-prov protein - Xenopus laevis
(African clawed frog)
Length = 150
Score = 63.3 bits (147), Expect = 2e-09
Identities = 37/85 (43%), Positives = 56/85 (65%)
Frame = +2
Query: 38 PFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDE 217
P G KG+VL+ + + K+PNSA RKC RV+L NGK+V F+P +G ++++E++
Sbjct: 62 PTFGCPQLKGVVLKTMIRKPKKPNSANRKCARVRL-SNGKEVICFIPGEG--HNLQEHNI 118
Query: 218 VLVAGFGRKGHAVGDIPGVRFKVVK 292
VLV G GR D+PGV+ K+V+
Sbjct: 119 VLVEG-GR----TQDLPGVKLKIVR 138
>UniRef50_Q1HPJ4 Cluster: Mitochondrial ribosomal protein S12; n=3;
Coelomata|Rep: Mitochondrial ribosomal protein S12 -
Bombyx mori (Silk moth)
Length = 111
Score = 63.3 bits (147), Expect = 2e-09
Identities = 39/94 (41%), Positives = 59/94 (62%)
Frame = +2
Query: 11 HMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGC 190
H+ + NP G AKG+VL+ V + K+PNSA RKCV V+L NGK++ A++P G
Sbjct: 13 HIKKRKSRNPLNGNPFAKGVVLKTVIKKPKKPNSANRKCVLVRL-SNGKEMVAYIP--GI 69
Query: 191 LNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVK 292
++++E++ VLV GR + D PGV+ K V+
Sbjct: 70 GHNLQEHNVVLVR-VGR----LKDCPGVKLKCVR 98
>UniRef50_O70089 Cluster: 30S ribosomal protein S12; n=35; cellular
organisms|Rep: 30S ribosomal protein S12 - Aquifex
aeolicus
Length = 128
Score = 62.9 bits (146), Expect = 3e-09
Identities = 38/92 (41%), Positives = 58/92 (63%)
Frame = +2
Query: 23 KWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHI 202
K KA G +G+ + V K+PNSA+RK RV+L NG +VTA++P +G +++
Sbjct: 18 KSKAPALQGCPQKRGVCVRVYTVTPKKPNSALRKVARVRL-SNGIEVTAYIPGEG--HNL 74
Query: 203 EENDEVLVAGFGRKGHAVGDIPGVRFKVVKVA 298
+E+ VLV G GR V D+PGVR+K+++ A
Sbjct: 75 QEHSIVLVRG-GR----VKDLPGVRYKIIRGA 101
>UniRef50_Q1PPX2 Cluster: Em1-tg19B; n=1; Euplotes aediculatus|Rep:
Em1-tg19B - Euplotes aediculatus
Length = 139
Score = 60.1 bits (139), Expect = 2e-08
Identities = 36/119 (30%), Positives = 60/119 (50%)
Frame = -3
Query: 376 QVTYHNVHL*SWSLLFLFVESEERHVGYFYHLKTNSGNVTDGVTFTTESRH*YXXXXXXX 197
Q++Y L W + F+ + R+ G F L+ ++ +++D V+ ++E
Sbjct: 3 QISYQQSALLDWLVFFVSPKCVNRNSGNFDDLEPDTRHISDSVSLSSEVLDENFVVIFCE 62
Query: 196 X*ATVTGDECGHFLSVLNELYTDAFADGRVGLLSFYTNFLEDDALCVRCTTERVSLPFR 20
TV+ +E HFL VL EL++DA ++G V LL F + DDA C +E + L R
Sbjct: 63 SKTTVSWNESSHFLVVLFELHSDALSNGCVWLLGFDCDLFYDDACCAWSNSEWLILGSR 121
>UniRef50_A5DX89 Cluster: 30S ribosomal protein S12; n=6;
Saccharomycetales|Rep: 30S ribosomal protein S12 -
Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 183
Score = 60.1 bits (139), Expect = 2e-08
Identities = 33/79 (41%), Positives = 56/79 (70%)
Frame = +2
Query: 62 KGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGR 241
+G++L + ++ K+PNSA+RKC RV+L NGK ++A +P +G ++++E+ VLV G GR
Sbjct: 90 RGVILRIMILKPKKPNSALRKCARVRL-SNGKVISALIPGEG--HNLQEHHVVLVRG-GR 145
Query: 242 KGHAVGDIPGVRFKVVKVA 298
V D+PGV++ +V+ A
Sbjct: 146 ----VQDVPGVKYHLVRGA 160
>UniRef50_Q9NEH6 Cluster: EG:BACH59J11.1 protein; n=2;
Bilateria|Rep: EG:BACH59J11.1 protein - Drosophila
melanogaster (Fruit fly)
Length = 154
Score = 58.4 bits (135), Expect = 7e-08
Identities = 34/94 (36%), Positives = 59/94 (62%)
Frame = +2
Query: 11 HMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGC 190
H+ T+ P G AKG+VL+ + + K+PNSA RKCV V+L GK++ A++P G
Sbjct: 56 HIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVRL-STGKEMVAYIP--GI 112
Query: 191 LNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVK 292
++++E++ +++ GR + D+PGV+ K V+
Sbjct: 113 GHNLQEHN-IVLCRVGR----LQDVPGVKLKAVR 141
>UniRef50_P10735 Cluster: 40S ribosomal protein S12, mitochondrial
precursor; n=7; Coelomata|Rep: 40S ribosomal protein
S12, mitochondrial precursor - Drosophila melanogaster
(Fruit fly)
Length = 140
Score = 58.4 bits (135), Expect = 7e-08
Identities = 34/94 (36%), Positives = 59/94 (62%)
Frame = +2
Query: 11 HMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGC 190
H+ T+ P G AKG+VL+ + + K+PNSA RKCV V+L GK++ A++P G
Sbjct: 42 HIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVRL-STGKEMVAYIP--GI 98
Query: 191 LNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVK 292
++++E++ +++ GR + D+PGV+ K V+
Sbjct: 99 GHNLQEHN-IVLCRVGR----LQDVPGVKLKAVR 127
>UniRef50_Q5K6X0 Cluster: Ribosomal protein S12, putative; n=2;
Dikarya|Rep: Ribosomal protein S12, putative -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 176
Score = 58.0 bits (134), Expect = 9e-08
Identities = 35/97 (36%), Positives = 57/97 (58%), Gaps = 2/97 (2%)
Frame = +2
Query: 8 AHMGTKWKANP--FGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPR 181
A TK K++ G K + + + ++PNSA+RK RV+L NG+ TA++P
Sbjct: 62 ARKSTKRKSSVPLLDGCFQKKAVCAKVYTTKPRKPNSAVRKVARVKL-SNGQMTTAYIPG 120
Query: 182 DGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVK 292
+G ++++E+ VLV G G K D+PGVR+K+V+
Sbjct: 121 EG--HNLQEHSVVLVRGGGAK-----DLPGVRYKIVR 150
>UniRef50_UPI0000D55D7C Cluster: PREDICTED: similar to 40S ribosomal
protein S12, mitochondrial precursor (MT-RPS12)
(Technical knockout locus protein); n=2; Coelomata|Rep:
PREDICTED: similar to 40S ribosomal protein S12,
mitochondrial precursor (MT-RPS12) (Technical knockout
locus protein) - Tribolium castaneum
Length = 156
Score = 56.0 bits (129), Expect = 3e-07
Identities = 34/94 (36%), Positives = 57/94 (60%)
Frame = +2
Query: 11 HMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGC 190
H+ + P G KG+VL+ + + K+PNSA RKCV V+L NGK++ A++P G
Sbjct: 60 HIKERKPRRPLDGKPFMKGVVLKTLIKKPKKPNSANRKCVLVRL-SNGKEMVAYIP--GI 116
Query: 191 LNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVK 292
++++E++ +++ GR V D PGV+ K V+
Sbjct: 117 GHNLQEHN-IVLCRVGR----VQDCPGVKIKCVR 145
>UniRef50_Q8BGG2 Cluster: Adult male spinal cord cDNA, RIKEN
full-length enriched library, clone:A330001L23
product:hypothetical protein, full insert sequence; n=8;
Euarchontoglires|Rep: Adult male spinal cord cDNA, RIKEN
full-length enriched library, clone:A330001L23
product:hypothetical protein, full insert sequence - Mus
musculus (Mouse)
Length = 154
Score = 54.4 bits (125), Expect = 1e-06
Identities = 30/83 (36%), Positives = 43/83 (51%)
Frame = -3
Query: 250 VTFTTESRH*YXXXXXXXX*ATVTGDECGHFLSVLNELYTDAFADGRVGLLSFYTNFLED 71
+TF+T+S + A + G E L VLNEL+ DA DGR+ L F +
Sbjct: 1 MTFSTKSSNQNFIIFLNEVQAAIIGHERCDLLPVLNELHPDALPDGRIWLFGLNPYFFQH 60
Query: 70 DALCVRCTTERVSLPFRTHVGFL 2
++LC+R T +R+ L VGFL
Sbjct: 61 NSLCMRGTPKRIGLQGCAQVGFL 83
>UniRef50_O15235 Cluster: 28S ribosomal protein S12, mitochondrial
precursor; n=13; Deuterostomia|Rep: 28S ribosomal
protein S12, mitochondrial precursor - Homo sapiens
(Human)
Length = 138
Score = 54.0 bits (124), Expect = 1e-06
Identities = 35/88 (39%), Positives = 50/88 (56%)
Frame = +2
Query: 29 KANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEE 208
K P G KG+VL + K+PNSA RKC RV+L G++ F+P +G + ++E
Sbjct: 48 KLGPTEGRPQLKGVVLCTFTRKPKKPNSANRKCCRVRL-STGREAVCFIPGEG--HTLQE 104
Query: 209 NDEVLVAGFGRKGHAVGDIPGVRFKVVK 292
+ VLV G GR D+PGV+ VV+
Sbjct: 105 HQIVLVEG-GR----TQDLPGVKLTVVR 127
>UniRef50_P14149 Cluster: Chloroplast 30S ribosomal protein S12;
n=5; cellular organisms|Rep: Chloroplast 30S ribosomal
protein S12 - Chlamydomonas reinhardtii
Length = 133
Score = 53.6 bits (123), Expect = 2e-06
Identities = 36/90 (40%), Positives = 53/90 (58%)
Frame = +2
Query: 23 KWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHI 202
K K+ +GI L V K+PNSA+RK RV+L G +VTA++P G +++
Sbjct: 18 KTKSPALKSCPQRRGICLRVYTVTPKKPNSALRKVARVRL-TTGFEVTAYIP--GVGHNL 74
Query: 203 EENDEVLVAGFGRKGHAVGDIPGVRFKVVK 292
+E+ VLV G GR V D+PGVR+ +V+
Sbjct: 75 QEHAVVLVRG-GR----VKDLPGVRYHIVR 99
>UniRef50_A3B198 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 128
Score = 51.2 bits (117), Expect = 1e-05
Identities = 22/27 (81%), Positives = 25/27 (92%)
Frame = +2
Query: 212 DEVLVAGFGRKGHAVGDIPGVRFKVVK 292
DEVL++GFG KGHAVGDI GVRF+VVK
Sbjct: 67 DEVLISGFGHKGHAVGDIRGVRFEVVK 93
>UniRef50_Q9XTY5 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 157
Score = 50.8 bits (116), Expect = 1e-05
Identities = 30/66 (45%), Positives = 43/66 (65%)
Frame = +2
Query: 47 GASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLV 226
G SH KGIVL+ V K+PNS RKC V+L G +V A++P G ++++E+ +VLV
Sbjct: 72 GYSHYKGIVLKTVIRHPKKPNSGNRKCAIVRL-STGAEVCAYIPNVG--HNLQEHSQVLV 128
Query: 227 AGFGRK 244
G GR+
Sbjct: 129 KG-GRR 133
>UniRef50_Q9TMN0 Cluster: Apicoplast 30S ribosomal protein S12; n=3;
Eukaryota|Rep: Apicoplast 30S ribosomal protein S12 -
Toxoplasma gondii
Length = 121
Score = 50.4 bits (115), Expect = 2e-05
Identities = 29/97 (29%), Positives = 60/97 (61%)
Frame = +2
Query: 2 KKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPR 181
K + + K ++ F KG+ ++ K+PNSA+RK +++L KN K++ A++P
Sbjct: 9 KHSRIKKKKQSYNFYTKPQIKGLCIKVFTRTPKKPNSALRKIAKIKL-KNKKEILAYIPG 67
Query: 182 DGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVK 292
+G + +++++ VL+ +KG V D+PG+++KV++
Sbjct: 68 EG--HALQDHNFVLI----KKGR-VQDLPGIKYKVIR 97
>UniRef50_P53732 Cluster: 37S ribosomal protein S12, mitochondrial
precursor; n=18; Dikarya|Rep: 37S ribosomal protein S12,
mitochondrial precursor - Saccharomyces cerevisiae
(Baker's yeast)
Length = 153
Score = 50.0 bits (114), Expect = 2e-05
Identities = 32/79 (40%), Positives = 50/79 (63%)
Frame = +2
Query: 62 KGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGR 241
KG+VL + ++ K+PNSA RK RV+L NG V+A++P +G + +E+ V V G GR
Sbjct: 59 KGVVLRVMVLKPKKPNSAQRKACRVRL-TNGNVVSAYIPGEG--HDAQEHSIVYVRG-GR 114
Query: 242 KGHAVGDIPGVRFKVVKVA 298
D+PGV++ V++ A
Sbjct: 115 ----CQDLPGVKYHVIRGA 129
>UniRef50_O14182 Cluster: Mitochondrial ribosomal protein subunit
S12; n=2; Ascomycota|Rep: Mitochondrial ribosomal
protein subunit S12 - Schizosaccharomyces pombe (Fission
yeast)
Length = 146
Score = 48.8 bits (111), Expect = 5e-05
Identities = 31/82 (37%), Positives = 49/82 (59%)
Frame = +2
Query: 47 GASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLV 226
G+ +G+ V+ K+PNSA+RK RV+L G+ VTA++P G ++ +E+ VL+
Sbjct: 47 GSPFRRGVCTRVFTVKPKKPNSAVRKVARVRL-STGRSVTAYIP--GIGHNAQEHAVVLL 103
Query: 227 AGFGRKGHAVGDIPGVRFKVVK 292
G GR D PGV++ VV+
Sbjct: 104 RG-GR----AQDCPGVQYHVVR 120
>UniRef50_Q2H267 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 141
Score = 47.2 bits (107), Expect = 2e-04
Identities = 31/74 (41%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
Frame = +2
Query: 80 KVGV-EAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAV 256
+VG+ + K+PNS RK RV+L GK +TA++P +G ++I+++ VLV G GR
Sbjct: 49 RVGITKPKKPNSGERKTARVRL-STGKVITAYIPGEG--HNIQQHSVVLVRG-GRS---- 100
Query: 257 GDIPGVRFKVVKVA 298
D PGVR+ +V+ A
Sbjct: 101 QDCPGVRYHLVRGA 114
>UniRef50_Q92J95 Cluster: 30S ribosomal protein S12; n=15; cellular
organisms|Rep: 30S ribosomal protein S12 - Rickettsia
conorii
Length = 129
Score = 47.2 bits (107), Expect = 2e-04
Identities = 32/87 (36%), Positives = 50/87 (57%)
Frame = +2
Query: 29 KANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEE 208
++NPF G+ L V K+PNSA+RK V+L N + V A++P G + ++E
Sbjct: 25 ESNPF-----KSGVCLVVKTVTPKKPNSALRKIATVRL-SNKRTVNAYIP--GEKHSVKE 76
Query: 209 NDEVLVAGFGRKGHAVGDIPGVRFKVV 289
+D VLV +G V D+PGV++ +V
Sbjct: 77 HDRVLV-----RGGQVPDLPGVKYHIV 98
>UniRef50_A7S120 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 110
Score = 46.8 bits (106), Expect = 2e-04
Identities = 27/77 (35%), Positives = 48/77 (62%)
Frame = +2
Query: 62 KGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGR 241
KG+ ++ + K+PNSA RKC ++L NGK ++A++P G ++E+ V+ G GR
Sbjct: 36 KGVCVKVFIRKPKKPNSAQRKCALLKL-SNGKTISAYIP--GERGQLQEHGVVIFEG-GR 91
Query: 242 KGHAVGDIPGVRFKVVK 292
V D PG+++K+++
Sbjct: 92 ----VQDCPGIKYKIIR 104
>UniRef50_A7AXG1 Cluster: Rps12; n=1; Babesia bovis|Rep: Rps12 -
Babesia bovis
Length = 123
Score = 46.0 bits (104), Expect = 4e-04
Identities = 27/64 (42%), Positives = 40/64 (62%)
Frame = +2
Query: 98 KQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVR 277
K+PNSA+RK ++ L N K V A+VP + + I +N VL+ KG V D+PGV+
Sbjct: 43 KKPNSAVRKVIKTTL--NKKTVLAYVPGENVI--IPKNSRVLI-----KGGNVPDLPGVK 93
Query: 278 FKVV 289
+KV+
Sbjct: 94 YKVI 97
>UniRef50_A6QU96 Cluster: Predicted protein; n=1; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 208
Score = 46.0 bits (104), Expect = 4e-04
Identities = 31/93 (33%), Positives = 49/93 (52%)
Frame = +2
Query: 2 KKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPR 181
+K K + G KG+ L+ + K+PNS RK R++L NG VT ++P
Sbjct: 90 RKGKRARKTTSPALVGRPQMKGVCLKTGITKPKKPNSGERKTARIRL-TNGAVVTGYIPG 148
Query: 182 DGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRF 280
+G ++I+++ VL+ G GR D PGVR+
Sbjct: 149 EG--HNIQQHSVVLIRG-GR----AQDCPGVRY 174
>UniRef50_P48858 Cluster: Mitochondrial ribosomal protein S12; n=3;
Eukaryota|Rep: Mitochondrial ribosomal protein S12 -
Chondrus crispus (Carragheen)
Length = 127
Score = 46.0 bits (104), Expect = 4e-04
Identities = 37/109 (33%), Positives = 56/109 (51%)
Frame = +2
Query: 20 TKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNH 199
TK K+ KGI ++ K+PNSA RK +V L NGK + ++ +G +
Sbjct: 17 TKSKSIALIQCPQKKGICMKVYTTSPKKPNSAERKVAKVNL-TNGKSIIGYISGEG--HT 73
Query: 200 IEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKEKKERPR 346
++E+ VLV G GR V D+PGV++ V+ L A+ KK R +
Sbjct: 74 LQEHSLVLVRG-GR----VKDLPGVQYHFVR-GVYDLHAVGTRKKSRSK 116
>UniRef50_P46759 Cluster: Mitochondrial ribosomal protein S12; n=3;
Eukaryota|Rep: Mitochondrial ribosomal protein S12 -
Acanthamoeba castellanii (Amoeba)
Length = 127
Score = 45.6 bits (103), Expect = 5e-04
Identities = 28/82 (34%), Positives = 49/82 (59%)
Frame = +2
Query: 47 GASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLV 226
G KG+ ++ V+ K+PNSA RK +++L + + A++P G ++++E VLV
Sbjct: 26 GCPQKKGVCVKLRIVKPKKPNSAQRKVAKLRL-STRRMIIAYIPGQG--HNLQEYSSVLV 82
Query: 227 AGFGRKGHAVGDIPGVRFKVVK 292
+G GR D+PGVR+ ++K
Sbjct: 83 SG-GR----APDLPGVRYTLIK 99
>UniRef50_P92532 Cluster: Mitochondrial ribosomal protein S12;
n=1255; cellular organisms|Rep: Mitochondrial ribosomal
protein S12 - Arabidopsis thaliana (Mouse-ear cress)
Length = 125
Score = 44.4 bits (100), Expect = 0.001
Identities = 27/76 (35%), Positives = 46/76 (60%)
Frame = +2
Query: 65 GIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRK 244
G+ L K+PNSA+RK +V+L N + A++P +G ++++E+ VL+ G GR
Sbjct: 32 GVCLRVSTRTPKKPNSALRKIAKVRL-SNRHDIFAYIPGEG--HNLQEHSTVLIRG-GR- 86
Query: 245 GHAVGDIPGVRFKVVK 292
V D+PGV+F ++
Sbjct: 87 ---VKDLPGVKFHCIR 99
>UniRef50_Q01607 Cluster: 40S ribosomal protein S12, mitochondrial
precursor; n=2; Eukaryota|Rep: 40S ribosomal protein
S12, mitochondrial precursor - Oenothera hookeri
(Hooker's evening primrose)
Length = 188
Score = 43.6 bits (98), Expect = 0.002
Identities = 29/83 (34%), Positives = 47/83 (56%)
Frame = +2
Query: 44 GGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVL 223
G +G+ L K+PNSA+ K +V+L N V A++P +G ++++E+ VL
Sbjct: 88 GKCPQKQGVCLRVSTRTPKKPNSALGKIAKVRL-SNRNDVFAYIPGEG--HNLQEHSMVL 144
Query: 224 VAGFGRKGHAVGDIPGVRFKVVK 292
V G GR V D+PGV+F ++
Sbjct: 145 VRG-GR----VKDLPGVKFHCIR 162
>UniRef50_A7AR95 Cluster: Ribosomal protein S12, putative; n=1;
Babesia bovis|Rep: Ribosomal protein S12, putative -
Babesia bovis
Length = 294
Score = 41.5 bits (93), Expect = 0.008
Identities = 29/82 (35%), Positives = 44/82 (53%)
Frame = +2
Query: 47 GASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLV 226
G KG+ + V ++PNS +RK RV+L G+ VT VP +G +++ + VLV
Sbjct: 127 GCPQKKGVCVTIRVVTPRKPNSGLRKVARVRL-STGRTVTCHVPGEG--HNLHTHSVVLV 183
Query: 227 AGFGRKGHAVGDIPGVRFKVVK 292
G GR D+ G +KVV+
Sbjct: 184 RG-GR----CQDVSGCHYKVVR 200
>UniRef50_Q4MYA6 Cluster: Ribosomal protein S12, putative; n=1;
Theileria parva|Rep: Ribosomal protein S12, putative -
Theileria parva
Length = 124
Score = 41.1 bits (92), Expect = 0.011
Identities = 25/76 (32%), Positives = 42/76 (55%)
Frame = +2
Query: 62 KGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGR 241
+G + + + K+PNSA RK ++L KN KK+ A++P G + + + VL+ G
Sbjct: 28 EGFLCSIISMSPKKPNSAKRKVGIIEL-KNNKKIKAYIP--GERSVVRDKTRVLIRGGNT 84
Query: 242 KGHAVGDIPGVRFKVV 289
+ D+PGV K+V
Sbjct: 85 R-----DLPGVNHKIV 95
>UniRef50_Q0QIR5 Cluster: Ribosomal protein S12; n=1;
Oltmannsiellopsis viridis|Rep: Ribosomal protein S12 -
Oltmannsiellopsis viridis (Marine flagellate)
Length = 127
Score = 40.7 bits (91), Expect = 0.014
Identities = 29/83 (34%), Positives = 48/83 (57%)
Frame = +2
Query: 98 KQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVR 277
K+PNSA+RK +V+L N V +P +G ++++E+ +L G GR V D+PGV+
Sbjct: 46 KKPNSALRKVAKVRL-SNKTTVIVAIPGEG--HNLKEHAIILFRG-GR----VRDLPGVK 97
Query: 278 FKVVKVANVSLLALYKEKKERPR 346
+K V+ + L + K K R +
Sbjct: 98 YKAVR-GVLDLAGVQKRKTARSK 119
>UniRef50_A7R6Q2 Cluster: Chromosome undetermined scaffold_1375,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_1375, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 915
Score = 38.7 bits (86), Expect = 0.057
Identities = 26/65 (40%), Positives = 42/65 (64%)
Frame = +2
Query: 98 KQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVR 277
K+ NSA+RK RV+L +G ++T ++P G ++ +E+ VLV G GR V D+P VR
Sbjct: 176 KKSNSALRKVARVRL-TSGFEITTYIP--GIGHNSQEHFVVLVRG-GR----VKDLPNVR 227
Query: 278 FKVVK 292
+ +V+
Sbjct: 228 YHIVR 232
>UniRef50_Q6VEC9 Cluster: Ribosomal protein S12; n=1; Emiliania
huxleyi|Rep: Ribosomal protein S12 - Emiliania huxleyi
Length = 124
Score = 37.5 bits (83), Expect = 0.13
Identities = 32/108 (29%), Positives = 53/108 (49%)
Frame = +2
Query: 17 GTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLN 196
G K +NP K I L+ + + K+PNSA R+ +V+ +K +T +P G +
Sbjct: 22 GKKLNSNP-----QRKVICLKVLTISPKKPNSANRRIAKVKTLKQPTFLTVKIP--GEKH 74
Query: 197 HIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKEKKER 340
+++++ VL+ G GR D+ GV K V+ LL + K R
Sbjct: 75 NLQQHSTVLICG-GRS----KDLIGVHLKAVR-GKFDLLGVNGRKSSR 116
>UniRef50_P15755 Cluster: Mitochondrial ribosomal protein S12; n=7;
Oligohymenophorea|Rep: Mitochondrial ribosomal protein
S12 - Paramecium tetraurelia
Length = 139
Score = 35.9 bits (79), Expect = 0.40
Identities = 26/77 (33%), Positives = 42/77 (54%)
Frame = +2
Query: 62 KGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGR 241
+G VL+ V K+PNSA R + +L N K V A +P G +++ ++ +LV G G
Sbjct: 31 EGSVLKPRIVTPKKPNSARRPVAKAKL-TNKKFVVAHIPGTG--HNLRKHSTILVRGGGC 87
Query: 242 KGHAVGDIPGVRFKVVK 292
+ D+PGVR ++
Sbjct: 88 R-----DLPGVRHTCIR 99
>UniRef50_UPI000049A59F Cluster: ankyrin repeat protein; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: ankyrin repeat
protein - Entamoeba histolytica HM-1:IMSS
Length = 681
Score = 34.7 bits (76), Expect = 0.92
Identities = 22/69 (31%), Positives = 40/69 (57%)
Frame = +2
Query: 143 IKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALY 322
IK + V+ F+P + L ++ N+ V V +KG AVG I G R+ + +A +++ L
Sbjct: 544 IKKVRMVSDFMPEEEELLRLKSNEIVEVYWEHKKGWAVGGING-RYGMFPLAKGTIIPLS 602
Query: 323 KEKKERPRS 349
KE++++ S
Sbjct: 603 KEEQDKINS 611
>UniRef50_Q6R9M1 Cluster: Putative uncharacterized protein orf127;
n=3; Zea mays|Rep: Putative uncharacterized protein
orf127 - Zea mays (Maize)
Length = 127
Score = 34.7 bits (76), Expect = 0.92
Identities = 27/72 (37%), Positives = 40/72 (55%)
Frame = +2
Query: 62 KGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGR 241
+G+ L K+PNSA+RK +V+L N + A +P +G ++ +E+ VLV G GR
Sbjct: 63 QGVCLRVSTRTPKKPNSALRKIAKVRL-SNRHDIFAHIPGEG--HNSQEHSIVLVRG-GR 118
Query: 242 KGHAVGDIPGVR 277
V D PG R
Sbjct: 119 ----VKDSPGKR 126
>UniRef50_Q11EN9 Cluster: Putative uncharacterized protein; n=1;
Mesorhizobium sp. BNC1|Rep: Putative uncharacterized
protein - Mesorhizobium sp. (strain BNC1)
Length = 338
Score = 32.3 bits (70), Expect = 4.9
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = -1
Query: 153 PFLMSCTRTHLRMAELGCLASTPTFSRTMPFA 58
P + R+H ++ E+ C + P +S T+PFA
Sbjct: 240 PTAFNSARSHNKILEIACFGAAPVYSSTVPFA 271
>UniRef50_Q02505 Cluster: Mucin-3A precursor; n=25; Eutheria|Rep:
Mucin-3A precursor - Homo sapiens (Human)
Length = 2541
Score = 32.3 bits (70), Expect = 4.9
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Frame = -1
Query: 288 TTLKRTPGMSPTA*PLRPNPATSTSSFSSMWFRQPSRGTNAV--TFFPFLMSCTRTHLRM 115
+TL+ TP P TSTS F++ F + S TNA+ +F + S T T +
Sbjct: 1855 STLQTTPST-----PSLQTSLTSTSEFTTESFTRGSTSTNAILTSFSTIIWSSTPTIIMS 1909
Query: 114 AELGCLASTPTFSRTM 67
+ + TP FS T+
Sbjct: 1910 SSPSSASITPVFSTTI 1925
>UniRef50_A4H5P4 Cluster: Putative uncharacterized protein; n=1;
Leishmania braziliensis|Rep: Putative uncharacterized
protein - Leishmania braziliensis
Length = 1248
Score = 31.9 bits (69), Expect = 6.5
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = -1
Query: 312 RRDTLATFTTLKRTPGMSPTA*PLRPNPATSTSSFSSMWFRQPSRGTN 169
RR L F +KR+ R N A+ S +S W RQP +G++
Sbjct: 906 RRTVLGRFEAIKRSGSEKSQQHQQRTNSASLRDSLTSTWERQPQQGSS 953
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 462,959,045
Number of Sequences: 1657284
Number of extensions: 9112060
Number of successful extensions: 22212
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 21535
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22115
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 23183027945
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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