Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12p10f
(532 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ855496-1|ABH88183.1| 129|Tribolium castaneum chemosensory pro... 24 0.73
AF442747-1|AAL40947.1| 669|Tribolium castaneum ABC transmembran... 24 0.96
AF422804-1|AAL56571.1| 669|Tribolium castaneum ABC transmembran... 24 0.96
AY052394-1|AAL15468.1| 228|Tribolium castaneum tryptophan oxyge... 22 2.9
AY052392-1|AAL15466.1| 388|Tribolium castaneum tryptophan oxyge... 22 2.9
AY052390-1|AAL15464.1| 388|Tribolium castaneum tryptophan oxyge... 22 2.9
AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein. 21 6.8
AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein. 21 6.8
AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase ... 21 6.8
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 21 6.8
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 21 6.8
AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory recept... 21 6.8
AM292352-1|CAL23164.1| 250|Tribolium castaneum gustatory recept... 21 8.9
>DQ855496-1|ABH88183.1| 129|Tribolium castaneum chemosensory
protein 10 protein.
Length = 129
Score = 24.2 bits (50), Expect = 0.73
Identities = 12/45 (26%), Positives = 17/45 (37%)
Frame = +2
Query: 287 KRLLKEFPDKFGFSVSHTTRAPRAGEKNGVHYHFTNLNDMSTAIE 421
+ L K PD S T + G + +HY N D +E
Sbjct: 61 EELKKALPDALHSGCSKCTEKQKEGSRKIIHYLIDNKRDWWNELE 105
>AF442747-1|AAL40947.1| 669|Tribolium castaneum ABC transmembrane
transporter protein.
Length = 669
Score = 23.8 bits (49), Expect = 0.96
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +2
Query: 242 LVLCGPSGSGKSTLLKRL 295
L + G SG+GK+TLL L
Sbjct: 107 LAILGSSGAGKTTLLNTL 124
>AF422804-1|AAL56571.1| 669|Tribolium castaneum ABC transmembrane
transporter white protein.
Length = 669
Score = 23.8 bits (49), Expect = 0.96
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +2
Query: 242 LVLCGPSGSGKSTLLKRL 295
L + G SG+GK+TLL L
Sbjct: 107 LAILGSSGAGKTTLLNTL 124
>AY052394-1|AAL15468.1| 228|Tribolium castaneum tryptophan
oxygenase protein.
Length = 228
Score = 22.2 bits (45), Expect = 2.9
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = -2
Query: 201 FKNVVRVVIQFSVSDKITRSGSGY*YLKFTLLPRIK 94
+ +V+ V S T SGY YL+ TL R K
Sbjct: 147 YNHVLMVQRMIGSSQLGTGGSSGYQYLRSTLSDRYK 182
>AY052392-1|AAL15466.1| 388|Tribolium castaneum tryptophan
oxygenase protein.
Length = 388
Score = 22.2 bits (45), Expect = 2.9
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = -2
Query: 201 FKNVVRVVIQFSVSDKITRSGSGY*YLKFTLLPRIK 94
+ +V+ V S T SGY YL+ TL R K
Sbjct: 307 YNHVLMVQRMIGSSQLGTGGSSGYQYLRSTLSDRYK 342
>AY052390-1|AAL15464.1| 388|Tribolium castaneum tryptophan
oxygenase protein.
Length = 388
Score = 22.2 bits (45), Expect = 2.9
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = -2
Query: 201 FKNVVRVVIQFSVSDKITRSGSGY*YLKFTLLPRIK 94
+ +V+ V S T SGY YL+ TL R K
Sbjct: 307 YNHVLMVQRMIGSSQLGTGGSSGYQYLRSTLSDRYK 342
>AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein.
Length = 790
Score = 21.0 bits (42), Expect = 6.8
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = -2
Query: 468 P*MFPLKIAVSINSPFSIAVDIS 400
P M+PL SP+ A+ IS
Sbjct: 191 PSMYPLSPGAGFRSPYPSALPIS 213
>AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein.
Length = 682
Score = 21.0 bits (42), Expect = 6.8
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = -2
Query: 468 P*MFPLKIAVSINSPFSIAVDIS 400
P M+PL SP+ A+ IS
Sbjct: 83 PSMYPLSPGAGFRSPYPSALPIS 105
>AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase
protein.
Length = 677
Score = 21.0 bits (42), Expect = 6.8
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = -1
Query: 505 STTYIIYCFLACSINVSTENCSF 437
S TYI Y F S V ++ SF
Sbjct: 140 SATYICYAFGKFSCKVMIQSVSF 162
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 21.0 bits (42), Expect = 6.8
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = -1
Query: 505 STTYIIYCFLACSINVSTENCSF 437
S TYI Y F S V ++ SF
Sbjct: 373 SATYICYAFGKFSCKVMIQSVSF 395
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 21.0 bits (42), Expect = 6.8
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = -1
Query: 505 STTYIIYCFLACSINVSTENCSF 437
S TYI Y F S V ++ SF
Sbjct: 373 SATYICYAFGKFSCKVMIQSVSF 395
>AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory receptor
candidate 19 protein.
Length = 355
Score = 21.0 bits (42), Expect = 6.8
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = -3
Query: 527 YPAHIFCQYDVHHLLLSCLFH 465
Y + F + VH LLL C+++
Sbjct: 240 YFYYAFILFTVHLLLLVCIYY 260
>AM292352-1|CAL23164.1| 250|Tribolium castaneum gustatory receptor
candidate 31 protein.
Length = 250
Score = 20.6 bits (41), Expect = 8.9
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = -1
Query: 529 NIQHTYFASTTYIIYCFLACSI 464
N Q +FA +I C++A SI
Sbjct: 35 NKQLQFFAVEHLLIQCYIAVSI 56
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,055
Number of Sequences: 336
Number of extensions: 2418
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12887571
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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