Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12p10f
(532 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_0529 - 20067974-20068588,20069982-20070048,20070156-200702... 130 9e-31
06_03_0473 + 21190878-21191188,21191269-21192355,21192972-211931... 35 0.036
09_02_0303 + 7112456-7113244,7113328-7113488,7114523-7114583,711... 34 0.082
06_01_0421 - 3000486-3000595,3000909-3001148,3001659-3001722,300... 33 0.14
01_06_1699 - 39269477-39269574,39269690-39269929,39270029-392700... 33 0.19
11_06_0325 + 22376195-22377001,22377136-22377525,22377638-223777... 32 0.25
09_04_0727 + 19765175-19765384,19765523-19765595,19766476-197665... 32 0.33
09_02_0434 + 9365038-9366150,9367352-9368680,9368906-9370012,937... 32 0.33
12_02_0781 + 23105554-23106855,23107191-23107511,23107581-231076... 31 0.44
02_02_0074 + 6567362-6567550,6567685-6567753,6567869-6567970,656... 31 0.44
05_02_0030 + 5826065-5826092,5826307-5828309,5828412-5828732,582... 31 0.58
01_01_0517 + 3803740-3806106,3806226-3806312,3806397-3807035,380... 31 0.58
11_01_0346 - 2589111-2589220,2589613-2589852,2589956-2590028,259... 31 0.76
04_04_0961 + 29715938-29716034,29716918-29717133,29717438-297177... 31 0.76
01_01_0598 + 4443768-4443949,4444053-4444150,4444275-4444308,444... 31 0.76
06_03_0710 + 23792138-23792293,23792974-23793257,23794344-237944... 30 1.0
03_01_0300 + 2350232-2352274,2352349-2352669,2352752-2352838,235... 30 1.0
02_02_0616 - 12160899-12161506,12161698-12161821,12161974-121620... 30 1.0
02_02_0492 - 10907529-10907629,10907714-10907953,10908035-109080... 30 1.0
02_02_0490 - 10879761-10879861,10879946-10880185,10880274-108803... 30 1.0
01_01_0134 - 1224084-1224269,1224578-1224662,1224763-1225050,122... 30 1.0
11_01_0499 - 3834300-3835255,3836703-3837540,3837636-3837680 29 1.8
05_06_0196 + 26293889-26294122,26294317-26294375,26294454-262945... 29 1.8
04_04_1439 + 33614112-33614123,33614278-33615649,33615705-33616141 29 1.8
04_04_0962 + 29728983-29729034,29729622-29731369,29731656-297317... 29 1.8
08_01_0345 + 3055522-3055827,3055968-3056022,3056744-3056919,305... 29 2.3
08_01_0344 + 3043824-3044123,3044260-3044314,3044810-3044985,304... 29 2.3
06_03_1249 - 28688997-28689248,28689469-28689533,28690016-286900... 29 2.3
05_03_0017 - 7392742-7393110,7393212-7393319,7393522-7394079,739... 29 2.3
04_03_0867 - 20414999-20415160,20415255-20415384,20415515-204157... 29 2.3
03_06_0267 - 32751431-32751489,32751600-32751645,32751886-327519... 29 2.3
01_07_0299 + 42594363-42594424,42594516-42594798,42595185-425954... 29 2.3
05_06_0022 + 24988363-24988453,24989102-24989325,24989433-249894... 29 3.1
04_03_0826 + 20103105-20103697,20104222-20104391,20104487-201047... 29 3.1
03_05_0398 + 23790257-23790323,23791116-23791339,23792208-237922... 29 3.1
02_05_0385 - 28506326-28506891,28506993-28507405,28507496-285077... 29 3.1
11_06_0250 + 21701741-21701826,21702094-21702246,21703060-217031... 28 4.1
11_06_0150 - 20640535-20640600,20641299-20641451,20641567-20641830 28 4.1
10_08_0489 + 18269824-18270270,18271659-18271948,18272341-182725... 28 4.1
09_02_0569 - 10752756-10753164,10753229-10753644,10754149-107553... 28 4.1
07_03_0635 + 20151861-20152249,20152589-20152709,20154914-201549... 28 4.1
06_01_0193 - 1491710-1491739,1492194-1492319,1492631-1492766,149... 28 4.1
04_04_0582 + 26369537-26369914,26371598-26371887,26371985-263721... 28 4.1
03_01_0393 - 3062859-3062972,3063027-3063311,3063472-3063759,306... 28 4.1
10_06_0182 - 11552540-11552606,11552692-11552787,11553458-115535... 28 5.4
08_02_1614 - 28243532-28244589,28245149-28245383,28245524-282457... 28 5.4
08_01_0442 + 3922402-3922707,3922940-3923816,3925741-3926831 28 5.4
05_04_0148 - 18426903-18427106,18430516-18430594,18430752-184309... 28 5.4
03_02_0091 + 5574528-5577254 28 5.4
02_05_0449 - 29107310-29107377,29107732-29107777,29107860-291079... 28 5.4
01_03_0179 + 13500413-13500768,13502522-13502642,13502876-135029... 28 5.4
09_06_0365 - 22582467-22583524,22584407-22584641,22585474-225856... 27 7.1
09_06_0336 - 22393945-22394688 27 7.1
05_07_0354 - 29507068-29507170,29507406-29507431,29508264-295083... 27 7.1
04_04_1331 - 32706043-32707248,32707411-32707652,32707737-327085... 27 7.1
04_04_0271 + 24069218-24069433,24069695-24070365,24070458-24073410 27 7.1
04_04_0171 - 23282840-23283036,23283360-23283660,23283747-232840... 27 7.1
03_06_0003 + 30921197-30921388,30921514-30921632,30921742-309218... 27 7.1
03_02_0711 - 10591738-10591772,10592260-10592447,10593730-105938... 27 7.1
02_01_0670 - 4976658-4978037,4978128-4979015,4982590-4983130,498... 27 7.1
01_05_0415 - 21940466-21941536 27 7.1
01_01_0832 - 6500139-6500333,6500610-6500875,6501494-6501815,650... 27 7.1
01_01_0268 - 2214923-2215048,2215131-2215286,2215371-2215469,221... 27 7.1
12_01_0833 - 7730761-7731030,7731171-7731425,7731565-7731736,773... 27 9.4
11_06_0197 + 21149453-21149630,21149930-21149996,21150142-211502... 27 9.4
09_04_0484 + 17990020-17990488,17990930-17991009,17991122-179915... 27 9.4
09_04_0483 + 17979566-17980019,17980242-17980321,17980431-179808... 27 9.4
09_02_0504 - 10013784-10014041,10014558-10014660,10014932-100150... 27 9.4
09_01_0131 - 1966406-1966425,1967469-1967901 27 9.4
08_02_1554 + 27841801-27842007,27842282-27842455,27842554-278426... 27 9.4
07_01_0663 + 4975950-4977688,4978183-4978528 27 9.4
06_03_1333 - 29410014-29410052,29410071-29410322,29410601-294106... 27 9.4
06_03_1068 - 27341103-27341444,27341689-27341929,27342030-273423... 27 9.4
06_01_0209 + 1587656-1587876,1587964-1588055,1590520-1590545,159... 27 9.4
03_04_0206 - 18493178-18495310 27 9.4
02_01_0672 - 4989053-4990432,4990523-4991410,4995896-4996436,499... 27 9.4
01_06_0889 - 32741326-32741571,32741671-32741812,32741908-327422... 27 9.4
01_06_0857 - 32507119-32507328,32507936-32508058,32508194-325082... 27 9.4
01_05_0659 - 24061318-24061575,24061664-24061918,24062001-240621... 27 9.4
>12_02_0529 -
20067974-20068588,20069982-20070048,20070156-20070264,
20070357-20070402,20070501-20070636,20070745-20070866,
20070944-20071306,20071914-20072043,20072129-20072202,
20072620-20072709,20072836-20072875,20073047-20073117,
20074248-20074277
Length = 630
Score = 130 bits (313), Expect = 9e-31
Identities = 57/105 (54%), Positives = 78/105 (74%)
Frame = +2
Query: 218 MVQKGPRPLVLCGPSGSGKSTLLKRLLKEFPDKFGFSVSHTTRAPRAGEKNGVHYHFTNL 397
++ +G +P+V+ GPSG GK TL+ +L+KE+P KFGFSVSHTTRAPR E +GVHYHFT
Sbjct: 169 VIGEGQKPIVISGPSGVGKGTLIAKLMKEYPSKFGFSVSHTTRAPREKEIDGVHYHFTER 228
Query: 398 NDMSTAIEKGEFIETAIFSGNIYGTSKKAVDDVRRTGKICVLDIE 532
+ + I +G+F+E A GN+YGTS +AV+ V GK C+LDI+
Sbjct: 229 SKIEEEISEGKFLEFAHVHGNVYGTSVEAVESVTDEGKRCILDID 273
>06_03_0473 +
21190878-21191188,21191269-21192355,21192972-21193194,
21193286-21193356,21193385-21193441,21193442-21194056,
21194168-21194237,21194470-21194745,21194916-21195130,
21195224-21195529,21195750-21195813,21195902-21196141,
21196306-21196415
Length = 1214
Score = 35.1 bits (77), Expect = 0.036
Identities = 17/36 (47%), Positives = 24/36 (66%)
Frame = +2
Query: 221 VQKGPRPLVLCGPSGSGKSTLLKRLLKEFPDKFGFS 328
+++G + + +CGP GSGKS+LL LL E P G S
Sbjct: 433 IRRGEK-VAVCGPVGSGKSSLLCALLGEIPRTSGMS 467
>09_02_0303 +
7112456-7113244,7113328-7113488,7114523-7114583,
7114665-7114733,7114862-7114947,7115399-7115456,
7115631-7115843,7116059-7116124,7116368-7116484,
7116595-7116657
Length = 560
Score = 33.9 bits (74), Expect = 0.082
Identities = 16/28 (57%), Positives = 22/28 (78%), Gaps = 1/28 (3%)
Frame = +2
Query: 233 PRPLVLCGPSGSGKST-LLKRLLKEFPD 313
P+PL+L GP G GKST LL+RLL ++ +
Sbjct: 37 PQPLILHGPRGVGKSTLLLRRLLPQWSE 64
>06_01_0421 -
3000486-3000595,3000909-3001148,3001659-3001722,
3001969-3002274,3002365-3002579,3003047-3003341,
3003487-3003651,3003745-3004341,3004855-3004941,
3005022-3005342,3006218-3008242
Length = 1474
Score = 33.1 bits (72), Expect = 0.14
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +2
Query: 218 MVQKGPRPLVLCGPSGSGKSTLLKRLLKEFPDKFG 322
+V K + +CG GSGKSTLL +L E P G
Sbjct: 640 LVVKSGEKVAICGEVGSGKSTLLASVLGEVPKTEG 674
>01_06_1699 -
39269477-39269574,39269690-39269929,39270029-39270092,
39270251-39270771,39271032-39271326,39271400-39271564,
39271650-39272237,39272617-39272703,39272982-39274429,
39274515-39275015,39275574-39275678,39276095-39276143
Length = 1386
Score = 32.7 bits (71), Expect = 0.19
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +2
Query: 221 VQKGPRPLVLCGPSGSGKSTLLKRLLKEFP 310
+ KG + + +CGP GSGKS+LL ++ E P
Sbjct: 560 ISKGQK-VAVCGPVGSGKSSLLYSIMGEIP 588
>11_06_0325 +
22376195-22377001,22377136-22377525,22377638-22377778,
22377888-22378067,22378268-22378447,22378536-22378637,
22378768-22378896,22379318-22379422,22379528-22379623
Length = 709
Score = 32.3 bits (70), Expect = 0.25
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +2
Query: 218 MVQKGPRPLVLCGPSGSGKSTLLKRLLKEFPDKFG-FSVSHTTRAPRAGEKNGVHYH 385
+V++G + + + GP+G GKSTLLK +L + G + P E+N +H H
Sbjct: 455 IVERGEK-IAIIGPNGCGKSTLLKLILGMEKTQGGEVLLGEHNVLPNYFEQNQIHVH 510
>09_04_0727 +
19765175-19765384,19765523-19765595,19766476-19766570,
19766666-19768450,19768533-19768721,19768816-19768958,
19769075-19769320,19769975-19770059,19770117-19770191,
19770304-19770369,19770466-19770712,19770824-19771242
Length = 1210
Score = 31.9 bits (69), Expect = 0.33
Identities = 18/38 (47%), Positives = 22/38 (57%)
Frame = +2
Query: 233 PRPLVLCGPSGSGKSTLLKRLLKEFPDKFGFSVSHTTR 346
PR ++LCGP G+GK TL+ R L K G VS R
Sbjct: 419 PRGVLLCGPPGTGK-TLIARALACAASKAGQKVSFYMR 455
>09_02_0434 +
9365038-9366150,9367352-9368680,9368906-9370012,
9370960-9371022
Length = 1203
Score = 31.9 bits (69), Expect = 0.33
Identities = 13/30 (43%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Frame = +2
Query: 221 VQKGPRPLV-LCGPSGSGKSTLLKRLLKEF 307
+ +GP ++ +CGP G GK+ LLKR+ F
Sbjct: 149 ITEGPSAIIGICGPGGVGKTHLLKRINNNF 178
>12_02_0781 +
23105554-23106855,23107191-23107511,23107581-23107667,
23107907-23108302,23108327-23108500,23108600-23108764,
23108857-23109151,23109319-23109446,23109681-23109986,
23110531-23110591,23110676-23110915,23111251-23111372
Length = 1198
Score = 31.5 bits (68), Expect = 0.44
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = +2
Query: 218 MVQKGPRPLVLCGPSGSGKSTLLKRLLKEFP 310
MV+ G + + +CG GSGKS+LL +L E P
Sbjct: 400 MVKSGTK-VAICGEVGSGKSSLLAAILGEVP 429
>02_02_0074 +
6567362-6567550,6567685-6567753,6567869-6567970,
6568386-6568627,6569057-6569195,6569298-6569333,
6569838-6569972,6570315-6570547,6571204-6571298,
6571331-6571374,6571808-6571888
Length = 454
Score = 31.5 bits (68), Expect = 0.44
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +2
Query: 227 KGPRPLVLCGPSGSGKSTLLKRLL 298
+GPR +++ GPS SGKSTL K LL
Sbjct: 120 QGPR-VIIVGPSDSGKSTLCKMLL 142
>05_02_0030 +
5826065-5826092,5826307-5828309,5828412-5828732,
5828821-5828907,5828981-5829583,5829680-5829844,
5829941-5830235,5830320-5830534,5830621-5830926,
5831200-5831263,5831384-5831623,5831756-5831853
Length = 1474
Score = 31.1 bits (67), Expect = 0.58
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +2
Query: 242 LVLCGPSGSGKSTLLKRLLKEFPDKFG 322
+ +CGP G+GKS+LL +L E P G
Sbjct: 650 IAVCGPVGAGKSSLLCAMLGEIPRMSG 676
>01_01_0517 +
3803740-3806106,3806226-3806312,3806397-3807035,
3807118-3807282,3807363-3807657,3807739-3807953,
3808125-3808430,3808539-3808602,3808735-3808974,
3809150-3809253
Length = 1493
Score = 31.1 bits (67), Expect = 0.58
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = +2
Query: 224 QKGPRPLVLCGPSGSGKSTLLKRLLKEFPDKFG 322
Q+G R + +CG GSGKS+LL +L E P G
Sbjct: 650 QQGMR-IAVCGTVGSGKSSLLSCILGEIPKLSG 681
>11_01_0346 -
2589111-2589220,2589613-2589852,2589956-2590028,
2590301-2590606,2590698-2590912,2591461-2591755,
2591901-2592065,2592142-2592738,2593029-2593115,
2593203-2593523,2594047-2596071
Length = 1477
Score = 30.7 bits (66), Expect = 0.76
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +2
Query: 242 LVLCGPSGSGKSTLLKRLLKEFPDKFG 322
+ +CG GSGKSTLL +L E P G
Sbjct: 648 VAICGEVGSGKSTLLAAVLGEVPKTEG 674
>04_04_0961 +
29715938-29716034,29716918-29717133,29717438-29717776,
29718247-29719274,29719465-29719551,29719636-29720043,
29720394-29720558,29720742-29721036,29721131-29721345,
29721838-29722143,29722474-29722537,29722644-29722883,
29722959-29723062
Length = 1187
Score = 30.7 bits (66), Expect = 0.76
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +2
Query: 221 VQKGPRPLVLCGPSGSGKSTLLKRLLKEFPDKFG 322
V++G + + +CG GSGKS+LL +L E P G
Sbjct: 420 VKRGMK-VAICGMVGSGKSSLLSSILGEMPKLAG 452
>01_01_0598 +
4443768-4443949,4444053-4444150,4444275-4444308,
4444629-4444780,4444871-4445051,4445707-4445887,
4446034-4446142,4446324-4446451,4446758-4446832
Length = 379
Score = 30.7 bits (66), Expect = 0.76
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +2
Query: 224 QKGPRPLVLCGPSGSGKSTLLKRLLKEFPDKFG 322
+ P +V+CGP +GKST + LL ++G
Sbjct: 31 EPAPPVVVVCGPKNAGKSTFSRLLLNSLLPRYG 63
>06_03_0710 +
23792138-23792293,23792974-23793257,23794344-23794499,
23795318-23795804,23795864-23796181,23796773-23797165,
23797752-23798021
Length = 687
Score = 30.3 bits (65), Expect = 1.0
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = +2
Query: 242 LVLCGPSGSGKSTLLKRL 295
L L GPSGSGK+TLLK L
Sbjct: 104 LALMGPSGSGKTTLLKIL 121
>03_01_0300 +
2350232-2352274,2352349-2352669,2352752-2352838,
2353031-2353708,2353800-2353964,2354139-2354433,
2354581-2354795,2354885-2355190,2355269-2355332,
2355426-2355665,2355783-2355886
Length = 1505
Score = 30.3 bits (65), Expect = 1.0
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = +2
Query: 221 VQKGPRPLVLCGPSGSGKSTLLKRLLKEFPDKFG 322
V +G R + +CG GSGKS+LL +L E P G
Sbjct: 648 VVRGMR-VAVCGVIGSGKSSLLSSILGEIPKLCG 680
>02_02_0616 -
12160899-12161506,12161698-12161821,12161974-12162083,
12162119-12162271,12162545-12162779
Length = 409
Score = 30.3 bits (65), Expect = 1.0
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +2
Query: 362 EKNGVHYHFTNLNDMSTAIEKGEFIETAIFSG 457
++NG H HF N + A+ KG +E ++F+G
Sbjct: 89 QRNGHHGHFVEGNHYAEAVIKGPRLEISLFTG 120
>02_02_0492 -
10907529-10907629,10907714-10907953,10908035-10908098,
10908416-10908721,10909347-10909561,10909656-10909950,
10910493-10910597,10911112-10911180,10911433-10911519,
10911953-10913704,10914964-10915054,10915217-10915488
Length = 1198
Score = 30.3 bits (65), Expect = 1.0
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +2
Query: 221 VQKGPRPLVLCGPSGSGKSTLLKRLLKEFP 310
+++G R + +CG GSGKS+LL +L E P
Sbjct: 565 IRQGMR-VAICGTVGSGKSSLLSCILGEIP 593
>02_02_0490 -
10879761-10879861,10879946-10880185,10880274-10880337,
10880426-10880731,10881098-10881312,10881417-10881711,
10882193-10882357,10882477-10882527,10882657-10883109,
10883195-10883281,10883736-10884800,10884858-10885376
Length = 1186
Score = 30.3 bits (65), Expect = 1.0
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +2
Query: 221 VQKGPRPLVLCGPSGSGKSTLLKRLLKEFP 310
+++G R + +CG GSGKS+LL +L E P
Sbjct: 388 IRQGMR-VAICGTVGSGKSSLLSCILGEIP 416
>01_01_0134 -
1224084-1224269,1224578-1224662,1224763-1225050,
1225114-1225334,1225511-1225642,1226218-1226494,
1226722-1226770,1226993-1227088,1227779-1227911,
1228241-1228391,1228484-1228674,1229167-1229382
Length = 674
Score = 30.3 bits (65), Expect = 1.0
Identities = 15/23 (65%), Positives = 16/23 (69%)
Frame = +2
Query: 227 KGPRPLVLCGPSGSGKSTLLKRL 295
K R L L GPSGSGK+TLL L
Sbjct: 85 KSGRLLALMGPSGSGKTTLLNVL 107
>11_01_0499 - 3834300-3835255,3836703-3837540,3837636-3837680
Length = 612
Score = 29.5 bits (63), Expect = 1.8
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = +2
Query: 242 LVLCGPSGSGKSTLLKRLLKEFPDKFGFSVSHTTRAP 352
L + GPSGSGKSTLL L + +V RAP
Sbjct: 72 LAVLGPSGSGKSTLLSILGGRLAGRHAGTVLAGGRAP 108
>05_06_0196 +
26293889-26294122,26294317-26294375,26294454-26294554,
26294638-26294717,26294856-26294906,26295225-26295299,
26295386-26295463,26295700-26295756,26296226-26296296,
26296395-26296494,26296574-26296678,26296763-26296825,
26296940-26297062,26297129-26297193,26297352-26297358
Length = 422
Score = 29.5 bits (63), Expect = 1.8
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = +2
Query: 242 LVLCGPSGSGKSTLLKRLLKEFPDKFGFSVSHTTRAPRAG 361
++L GP+GSGK TLL + L F D F ++ T +AG
Sbjct: 123 ILLIGPTGSGK-TLLAKTLARFAD-VPFVIADATAITQAG 160
>04_04_1439 + 33614112-33614123,33614278-33615649,33615705-33616141
Length = 606
Score = 29.5 bits (63), Expect = 1.8
Identities = 17/34 (50%), Positives = 20/34 (58%)
Frame = +2
Query: 221 VQKGPRPLVLCGPSGSGKSTLLKRLLKEFPDKFG 322
V G R V+ GP+G+GKSTLLK L E G
Sbjct: 398 VSMGQRVAVV-GPNGAGKSTLLKLLAGELTPTSG 430
>04_04_0962 +
29728983-29729034,29729622-29731369,29731656-29731742,
29732035-29732199,29732437-29732526,29732863-29733027,
29733124-29733418,29733550-29733764,29733879-29733947,
29734107-29734184,29734466-29734529,29734658-29734897,
29734985-29735124
Length = 1135
Score = 29.5 bits (63), Expect = 1.8
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +2
Query: 221 VQKGPRPLVLCGPSGSGKSTLLKRLLKEFP 310
+ KG + + +CG GSGKS+LL +L E P
Sbjct: 460 IHKGMK-VAVCGAVGSGKSSLLSCVLGEMP 488
>08_01_0345 + 3055522-3055827,3055968-3056022,3056744-3056919,
3057104-3057232,3057313-3057572,3057688-3058001,
3058268-3058491,3058862-3059214,3059489-3059916,
3060031-3061514
Length = 1242
Score = 29.1 bits (62), Expect = 2.3
Identities = 13/27 (48%), Positives = 20/27 (74%)
Frame = +2
Query: 221 VQKGPRPLVLCGPSGSGKSTLLKRLLK 301
++ G R + L GPSG+GKST++ LL+
Sbjct: 1014 IEPGQR-VALVGPSGAGKSTIVSLLLR 1039
>08_01_0344 + 3043824-3044123,3044260-3044314,3044810-3044985,
3045083-3045283,3045383-3045642,3045909-3046222,
3046399-3046622,3047046-3047398,3047709-3047826,
3047875-3048133,3048252-3049729
Length = 1245
Score = 29.1 bits (62), Expect = 2.3
Identities = 14/35 (40%), Positives = 24/35 (68%)
Frame = +2
Query: 218 MVQKGPRPLVLCGPSGSGKSTLLKRLLKEFPDKFG 322
+++ G R + L GPSG+GKS++L LL+ + + G
Sbjct: 1018 VIEPGQR-VALVGPSGAGKSSVLALLLRFYDPQRG 1051
>06_03_1249 -
28688997-28689248,28689469-28689533,28690016-28690093,
28691480-28691824,28693314-28693510,28695601-28696601
Length = 645
Score = 29.1 bits (62), Expect = 2.3
Identities = 15/23 (65%), Positives = 18/23 (78%), Gaps = 2/23 (8%)
Frame = +2
Query: 233 PRPLVL--CGPSGSGKSTLLKRL 295
PR +V+ GPSGSGKSTLL+ L
Sbjct: 451 PRGVVVGVIGPSGSGKSTLLRAL 473
>05_03_0017 -
7392742-7393110,7393212-7393319,7393522-7394079,
7394186-7394311,7394396-7394521,7394673-7395137,
7396822-7396901,7397394-7397664
Length = 700
Score = 29.1 bits (62), Expect = 2.3
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +2
Query: 236 RPLVLCGPSGSGKSTLLKRL 295
R + + GPSGSGKSTLL L
Sbjct: 70 RVVAIMGPSGSGKSTLLDAL 89
>04_03_0867 -
20414999-20415160,20415255-20415384,20415515-20415702,
20415967-20416001,20416363-20416579,20416737-20416820,
20417609-20417875,20417954-20418061,20418163-20418249,
20418629-20419399
Length = 682
Score = 29.1 bits (62), Expect = 2.3
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +2
Query: 242 LVLCGPSGSGKSTLLKRLLKEFPDKFGFSVSHTT 343
+ GPSG GK+TL K LL+ + + S S TT
Sbjct: 486 IAFVGPSGGGKTTLAKLLLRLYQPQSVASWSATT 519
>03_06_0267 -
32751431-32751489,32751600-32751645,32751886-32751960,
32752045-32752114,32752288-32752386,32752505-32752641,
32753040-32753221,32753314-32753482,32753824-32753856,
32753958-32754068,32754184-32754295,32755592-32755727,
32756264-32756291
Length = 418
Score = 29.1 bits (62), Expect = 2.3
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +2
Query: 242 LVLCGPSGSGKSTLLKRLLKE 304
L+ GPSGSGK TL+ L+K+
Sbjct: 101 LLFYGPSGSGKKTLVMALIKQ 121
>01_07_0299 + 42594363-42594424,42594516-42594798,42595185-42595409,
42596395-42596592,42596871-42597325,42597824-42597962,
42598035-42598113,42598686-42598924,42599058-42599362,
42599449-42599560,42599640-42599804,42599933-42600071,
42600111-42600219,42600733-42600823,42600940-42601064,
42601148-42601297,42601383-42601455,42601630-42601810,
42601888-42602046,42602939-42603085,42603176-42603220,
42603305-42603382,42603565-42603719,42603875-42603927,
42604012-42604090,42604271-42604357
Length = 1310
Score = 29.1 bits (62), Expect = 2.3
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +2
Query: 236 RPLVLCGPSGSGKSTLLKRLLKEFPDKFGFSVSH 337
+ L++ GP+GSGKS++ + L D+ + +SH
Sbjct: 1140 KSLLVTGPNGSGKSSIFRVLRGTLRDQIIYPLSH 1173
>05_06_0022 +
24988363-24988453,24989102-24989325,24989433-24989494,
24990219-24990440,24990740-24990869,24991373-24991698,
24991910-24992051,24992169-24992414
Length = 480
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +2
Query: 227 KGPRPLVLCGPSGSGKSTLLKRLLKE 304
+ P L++ G G+GKST+LK +LKE
Sbjct: 175 RSPVLLLMGGGMGAGKSTVLKDILKE 200
>04_03_0826 +
20103105-20103697,20104222-20104391,20104487-20104716,
20104825-20104933,20104967-20105154,20105818-20105919,
20106114-20106395,20106504-20106625,20106708-20107020,
20107096-20107329,20107477-20107767,20107975-20108286
Length = 981
Score = 28.7 bits (61), Expect = 3.1
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 242 LVLCGPSGSGKSTLLKRLLKEFPDKFGFSV 331
L+ CGP+G GK+ L K L + G S+
Sbjct: 673 LIFCGPTGVGKTELTKALAASYFGSVGHSL 702
>03_05_0398 +
23790257-23790323,23791116-23791339,23792208-23792275,
23794738-23794980,23795108-23795237,23797235-23797954
Length = 483
Score = 28.7 bits (61), Expect = 3.1
Identities = 12/27 (44%), Positives = 20/27 (74%)
Frame = +2
Query: 224 QKGPRPLVLCGPSGSGKSTLLKRLLKE 304
++ P L++ G G+GKST+LK +L+E
Sbjct: 175 ERSPVLLLMGGGMGAGKSTVLKEILQE 201
>02_05_0385 - 28506326-28506891,28506993-28507405,28507496-28507743,
28507820-28508480,28508572-28509498,28509588-28509847,
28509943-28510143,28515547-28515633,28516200-28516375,
28516465-28516519,28516623-28516910
Length = 1293
Score = 28.7 bits (61), Expect = 3.1
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +2
Query: 218 MVQKGPRPLVLCGPSGSGKSTLLKRLLK 301
++ K + + L G SGSGKST+L +L+
Sbjct: 1066 LLMKAGKSMALVGMSGSGKSTVLSLILR 1093
>11_06_0250 +
21701741-21701826,21702094-21702246,21703060-21703176,
21703288-21703402,21703604-21703624,21703710-21703757,
21704156-21704293,21704789-21704884,21704971-21705084,
21705364-21705432,21705613-21705683,21705785-21705878,
21706202-21706327,21706425-21706514,21706651-21706749
Length = 478
Score = 28.3 bits (60), Expect = 4.1
Identities = 24/61 (39%), Positives = 31/61 (50%), Gaps = 4/61 (6%)
Frame = +2
Query: 224 QKGPRPLV-LCGPSGSGKSTLLKRLLKE---FPDKFGFSVSHTTRAPRAGEKNGVHYHFT 391
Q P P+V L G + +GKSTLL RL DK ++ TTR R KNG + T
Sbjct: 249 QSVPIPVVSLVGYTNAGKSTLLNRLTGADVLAEDKLFATLDPTTR--RVLMKNGTEFLLT 306
Query: 392 N 394
+
Sbjct: 307 D 307
>11_06_0150 - 20640535-20640600,20641299-20641451,20641567-20641830
Length = 160
Score = 28.3 bits (60), Expect = 4.1
Identities = 23/83 (27%), Positives = 34/83 (40%), Gaps = 3/83 (3%)
Frame = +2
Query: 230 GPRPLVLCGPSGSGKSTLLKRL---LKEFPDKFGFSVSHTTRAPRAGEKNGVHYHFTNLN 400
GPR ++ GP+GSGKS+L+ + L P G S R E V +
Sbjct: 58 GPRLNLVLGPNGSGKSSLVCAIALALAADPGVLGRVASVGAFVKRGEESGHVKISLAGTH 117
Query: 401 DMSTAIEKGEFIETAIFSGNIYG 469
+ + +G I SG+ G
Sbjct: 118 PNTLSASRGRSIPRTSPSGSSMG 140
>10_08_0489 +
18269824-18270270,18271659-18271948,18272341-18272512,
18272608-18272730,18272832-18272960,18273061-18273255,
18273384-18273470,18273563-18273835,18274047-18274154,
18274769-18275116
Length = 723
Score = 28.3 bits (60), Expect = 4.1
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = +2
Query: 248 LCGPSGSGKSTLLKRL 295
L GPSGSGKSTLL L
Sbjct: 106 LMGPSGSGKSTLLDAL 121
>09_02_0569 -
10752756-10753164,10753229-10753644,10754149-10755349,
10756770-10756991,10757615-10757767,10757883-10758034,
10758142-10758222,10758353-10758598,10759394-10759516
Length = 1000
Score = 28.3 bits (60), Expect = 4.1
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +2
Query: 248 LCGPSGSGKSTLLKRL 295
+CG GSGK+TLLK+L
Sbjct: 480 ICGMGGSGKTTLLKQL 495
>07_03_0635 +
20151861-20152249,20152589-20152709,20154914-20154996,
20155819-20155903,20155987-20156277,20156555-20156645,
20157380-20158280,20158401-20158561,20158759-20158862,
20159040-20159205,20159283-20159378,20159694-20159800,
20160443-20160775,20161393-20161599,20161774-20161857,
20162887-20163020,20163166-20163393,20163541-20163712,
20164301-20164555,20164647-20164919
Length = 1426
Score = 28.3 bits (60), Expect = 4.1
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +2
Query: 227 KGPRPLVLCGPSGSGKSTLLKRLLKEFPDK 316
K R +L GP SGKSTL++ L + PDK
Sbjct: 195 KPSRMTLLLGPPSSGKSTLMRALTGK-PDK 223
>06_01_0193 -
1491710-1491739,1492194-1492319,1492631-1492766,
1493048-1493112,1493213-1493305,1493433-1493498,
1493763-1493843,1493977-1494032,1494692-1494780,
1495340-1495425,1495531-1495647,1496109-1496254,
1496665-1496725,1496831-1496914,1497028-1497135,
1497286-1497388,1497802-1497845,1498100-1498584,
1499417-1499603,1500150-1500362,1501066-1501323
Length = 877
Score = 28.3 bits (60), Expect = 4.1
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +2
Query: 236 RPLVLCGPSGSGKSTLLKRLLKEFPDKFG 322
+ + + G SGSGKST+L+ L + F G
Sbjct: 650 KSVAIVGTSGSGKSTILRLLFRFFDSSSG 678
>04_04_0582 +
26369537-26369914,26371598-26371887,26371985-26372156,
26372271-26372393,26372499-26372627,26372785-26372979,
26373128-26373214,26373296-26373568,26374166-26374273,
26374363-26374686
Length = 692
Score = 28.3 bits (60), Expect = 4.1
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = +2
Query: 248 LCGPSGSGKSTLLKRL 295
L GPSGSGKSTLL L
Sbjct: 83 LMGPSGSGKSTLLDAL 98
>03_01_0393 -
3062859-3062972,3063027-3063311,3063472-3063759,
3063844-3064161,3064232-3064415,3064504-3064659,
3066394-3066620,3066734-3066804,3067090-3067534
Length = 695
Score = 28.3 bits (60), Expect = 4.1
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = +2
Query: 242 LVLCGPSGSGKSTLLKRL 295
L L GPSGSGK+TLL L
Sbjct: 203 LALMGPSGSGKTTLLSIL 220
>10_06_0182 -
11552540-11552606,11552692-11552787,11553458-11553528,
11553660-11553764,11554149-11554239,11554331-11554381,
11554478-11554566,11554667-11554909,11555027-11555190,
11555883-11555988,11556075-11556242,11557456-11557494,
11557582-11557713
Length = 473
Score = 27.9 bits (59), Expect = 5.4
Identities = 28/106 (26%), Positives = 47/106 (44%), Gaps = 9/106 (8%)
Frame = +2
Query: 236 RPLVLCGPSGSGKSTLL-KRLLKEFPDKFGFSVSHTTRAPR------AGEKNGVHYHFTN 394
R LV+CGP +G L+ R L F K SV + R P+ + + F
Sbjct: 66 RVLVICGPGNNGGDGLVAARHLHHFGYK--PSVCYPKRTPKPLYSGLCTQLESLTIPFVP 123
Query: 395 LNDMSTAI-EKGEFIETAIFSGNIYGTSKKAVDD-VRRTGKICVLD 526
+ D+ + E+ + I A+F + +GT + DD + R + +D
Sbjct: 124 VEDLPANLSEEFDIIIDAMFGFSFHGTPRPPFDDLINRLVSLSAID 169
>08_02_1614 -
28243532-28244589,28245149-28245383,28245524-28245734,
28245834-28245907,28246465-28246665
Length = 592
Score = 27.9 bits (59), Expect = 5.4
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +2
Query: 242 LVLCGPSGSGKSTLLK 289
+ L GP+G+GKSTLLK
Sbjct: 406 IALVGPNGAGKSTLLK 421
>08_01_0442 + 3922402-3922707,3922940-3923816,3925741-3926831
Length = 757
Score = 27.9 bits (59), Expect = 5.4
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +2
Query: 242 LVLCGPSGSGKSTLLKRL 295
L + GPSGSGK+TLL L
Sbjct: 162 LAMLGPSGSGKTTLLTAL 179
>05_04_0148 -
18426903-18427106,18430516-18430594,18430752-18430935,
18431020-18431063,18432028-18432165,18432713-18434511
Length = 815
Score = 27.9 bits (59), Expect = 5.4
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +2
Query: 242 LVLCGPSGSGKSTLLKRL 295
L + GPSG+GKSTLL+ L
Sbjct: 98 LAVVGPSGAGKSTLLRIL 115
>03_02_0091 + 5574528-5577254
Length = 908
Score = 27.9 bits (59), Expect = 5.4
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +2
Query: 242 LVLCGPSGSGKSTLLKRLLKEF 307
+ +CG +G GKSTLL+R+ F
Sbjct: 175 VAICGMAGVGKSTLLRRINNVF 196
>02_05_0449 -
29107310-29107377,29107732-29107777,29107860-29107934,
29108053-29108122,29108313-29108408,29108728-29108914,
29109001-29109169,29109614-29109646,29109731-29109841,
29110070-29111256,29112380-29112448,29114417-29114975,
29115455-29115589,29115714-29115896
Length = 995
Score = 27.9 bits (59), Expect = 5.4
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 242 LVLCGPSGSGKSTLLKRLLKEFPDKFGFSVSH 337
++ GP GSGKS+L + ++ E +VSH
Sbjct: 720 IIFKGPPGSGKSSLCRAVVTEIFGDSSLNVSH 751
>01_03_0179 +
13500413-13500768,13502522-13502642,13502876-13502998,
13504409-13504497,13504612-13504696,13504852-13505011,
13505096-13505160,13505296-13505349,13505437-13505527,
13505685-13505986,13506084-13506365,13506451-13506764,
13506920-13507080,13507202-13507305,13507379-13507535,
13507652-13507896,13507995-13508327,13508428-13508751,
13508816-13508899,13509001-13509169,13509610-13509731,
13510538-13510792,13511115-13511252
Length = 1377
Score = 27.9 bits (59), Expect = 5.4
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = +2
Query: 227 KGPRPLVLCGPSGSGKSTLLKRLLKEFPDKFGFS 328
K R +L GP GSGK+TLL L + D S
Sbjct: 227 KPRRMTLLLGPPGSGKTTLLLALAGKLEDNLKVS 260
>09_06_0365 -
22582467-22583524,22584407-22584641,22585474-22585684,
22585775-22585848,22585943-22586092
Length = 575
Score = 27.5 bits (58), Expect = 7.1
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +2
Query: 242 LVLCGPSGSGKSTLLK 289
+ L GP+G+GKSTLLK
Sbjct: 389 VALVGPNGAGKSTLLK 404
>09_06_0336 - 22393945-22394688
Length = 247
Score = 27.5 bits (58), Expect = 7.1
Identities = 18/48 (37%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = +2
Query: 245 VLCGPSGS-GKSTLLKRLLKEFPDKFGFSVSHTTRAPRAGEKNGVHYH 385
++ G SG K T+ K EFP G SVS+ AG N H H
Sbjct: 55 LVTGNSGDPAKLTVTKATHAEFPALLGQSVSYAALVFGAGTVNPPHIH 102
>05_07_0354 -
29507068-29507170,29507406-29507431,29508264-29508301,
29508722-29508825,29509005-29509024,29509251-29509299,
29510319-29510406,29510463-29510562,29510660-29510737,
29512688-29512804,29513718-29513821,29514497-29514569,
29514904-29514981,29515091-29515215,29515278-29515341,
29515439-29515597,29515950-29516048,29516496-29516624,
29517010-29517075,29517160-29517304,29517379-29517500,
29517683-29517838,29517918-29518029,29518891-29519036,
29519148-29519252,29519391-29519540,29519703-29519776,
29519902-29520055,29520142-29520408
Length = 1016
Score = 27.5 bits (58), Expect = 7.1
Identities = 11/19 (57%), Positives = 16/19 (84%)
Frame = +2
Query: 230 GPRPLVLCGPSGSGKSTLL 286
GPR ++ GP+GSGKS+L+
Sbjct: 59 GPRLNLVVGPNGSGKSSLV 77
>04_04_1331 - 32706043-32707248,32707411-32707652,32707737-32708562,
32708640-32708863,32708946-32709262,32709381-32709443,
32709465-32709640,32710609-32710985,32711416-32711470,
32711614-32711913
Length = 1261
Score = 27.5 bits (58), Expect = 7.1
Identities = 17/38 (44%), Positives = 23/38 (60%)
Frame = +2
Query: 221 VQKGPRPLVLCGPSGSGKSTLLKRLLKEFPDKFGFSVS 334
+Q G R L G SGSGKST++ L++ F D G V+
Sbjct: 1045 IQAG-RSQALVGASGSGKSTVI-ALIERFYDPTGGKVT 1080
>04_04_0271 + 24069218-24069433,24069695-24070365,24070458-24073410
Length = 1279
Score = 27.5 bits (58), Expect = 7.1
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +2
Query: 236 RPLVLCGPSGSGKSTLLKRLLKEFPD 313
+ + L GPSGSGKST++ L++ F D
Sbjct: 1057 KTVALVGPSGSGKSTVI-GLIERFYD 1081
>04_04_0171 -
23282840-23283036,23283360-23283660,23283747-23284070,
23284678-23284698,23284877-23285788
Length = 584
Score = 27.5 bits (58), Expect = 7.1
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = +2
Query: 227 KGPRPLVLCGPSGSGKSTLLKRLLKEFPDKFGFSVS 334
K PR ++L GP G+GK+ L + + E F FSVS
Sbjct: 328 KLPRGVLLVGPPGTGKTLLARAVAGEAGIPF-FSVS 362
>03_06_0003 +
30921197-30921388,30921514-30921632,30921742-30921811,
30922078-30922161,30922258-30922344,30922431-30922501,
30922648-30922702,30923374-30923509,30925009-30925103,
30925203-30925357,30925435-30925543,30925761-30925817,
30925913-30926027,30926177-30926264,30926738-30927501,
30927600-30927688,30928315-30928422,30928550-30928657,
30928887-30928977,30929235-30929287,30929557-30929712,
30930763-30930825,30931491-30931535,30932075-30932130,
30933051-30933132,30933238-30933354,30933428-30933530,
30933912-30934062,30934180-30934417,30934564-30934764,
30934850-30934935,30935036-30935135
Length = 1347
Score = 27.5 bits (58), Expect = 7.1
Identities = 17/40 (42%), Positives = 22/40 (55%)
Frame = -2
Query: 210 IKSFKNVVRVVIQFSVSDKITRSGSGY*YLKFTLLPRIKQ 91
+ KNVVR +FS K SGSG +KF + +IKQ
Sbjct: 123 VSDHKNVVRCA-KFSPDGKYFASGSGDTSIKFFEVAKIKQ 161
>03_02_0711 -
10591738-10591772,10592260-10592447,10593730-10593872,
10593973-10594098,10594187-10594294,10594401-10594618,
10594719-10595208
Length = 435
Score = 27.5 bits (58), Expect = 7.1
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +1
Query: 274 EHVVEAAAERISRQVWLQCLP 336
EHV+ A + I R WLQ LP
Sbjct: 126 EHVMSAVPQGIGRDDWLQALP 146
>02_01_0670 - 4976658-4978037,4978128-4979015,4982590-4983130,
4983209-4983845,4983962-4983992,4984094-4984324
Length = 1235
Score = 27.5 bits (58), Expect = 7.1
Identities = 25/95 (26%), Positives = 40/95 (42%)
Frame = +2
Query: 221 VQKGPRPLVLCGPSGSGKSTLLKRLLKEFPDKFGFSVSHTTRAPRAGEKNGVHYHFTNLN 400
+Q G + L G SGSGKST++ L++ F D SV R +A + H L
Sbjct: 1012 IQPG-KSTALVGQSGSGKSTII-GLIERFYDPIRGSVKIDGRDIKAYNPRALRRHI-GLV 1068
Query: 401 DMSTAIEKGEFIETAIFSGNIYGTSKKAVDDVRRT 505
+ G E ++ S+ ++D R+
Sbjct: 1069 SQEPTLFAGTIRENIVYGTET--ASEAEIEDAARS 1101
>01_05_0415 - 21940466-21941536
Length = 356
Score = 27.5 bits (58), Expect = 7.1
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Frame = +1
Query: 223 SERASSSGTVRTFRLRQEHVVEAAAERISRQVWLQCL--PY 339
S +SSSGT T ++ AA +SR W +CL PY
Sbjct: 154 STTSSSSGTTTTTTKKKNKPRCAACRYLSRSCWPECLLAPY 194
>01_01_0832 - 6500139-6500333,6500610-6500875,6501494-6501815,
6501915-6502156,6502229-6502457,6503020-6503184,
6503279-6503605,6504150-6504191,6504333-6504400,
6504748-6504934,6506249-6506311,6506748-6506790,
6506919-6507019,6507110-6507184,6507359-6507445,
6507593-6507682,6507906-6507992,6508585-6508783,
6509113-6509177,6509502-6509606,6509726-6509871,
6510100-6510224,6510335-6510437,6510482-6510596,
6510734-6510869,6511298-6511387,6511484-6511578,
6511698-6511763,6511868-6511936,6512034-6512147,
6512241-6512448,6512545-6512600,6512818-6513552
Length = 1671
Score = 27.5 bits (58), Expect = 7.1
Identities = 11/18 (61%), Positives = 16/18 (88%)
Frame = +2
Query: 242 LVLCGPSGSGKSTLLKRL 295
L++ GPSGSGK++LL+ L
Sbjct: 1410 LLVMGPSGSGKTSLLRAL 1427
>01_01_0268 -
2214923-2215048,2215131-2215286,2215371-2215469,
2215557-2215631,2215732-2215800,2216515-2216713,
2220162-2220267,2221117-2221588
Length = 433
Score = 27.5 bits (58), Expect = 7.1
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = +2
Query: 236 RPLVLCGPSGSGKSTLLKRLLKEFPDKFGFSVS 334
R +L GP G+GKS L K + E F FS+S
Sbjct: 164 RAFLLYGPPGTGKSYLAKAVATEADSTF-FSIS 195
>12_01_0833 -
7730761-7731030,7731171-7731425,7731565-7731736,
7731873-7732106,7732362-7732495,7734116-7734199,
7735086-7735376,7735566-7735898,7736351-7736424,
7736558-7736653,7736876-7737029,7737118-7737221,
7737325-7737485,7737774-7738087,7738950-7739231,
7739909-7740210,7740513-7740713,7740924-7741014,
7741424-7741500,7741595-7741754,7742026-7742110,
7742194-7742288
Length = 1322
Score = 27.1 bits (57), Expect = 9.4
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +2
Query: 227 KGPRPLVLCGPSGSGKSTLLKRL 295
K R +L GP G GK+TLLK L
Sbjct: 29 KPSRITLLLGPPGCGKTTLLKAL 51
>11_06_0197 +
21149453-21149630,21149930-21149996,21150142-21150244,
21150901-21150971,21151091-21151154,21151239-21151304,
21151416-21151463,21151544-21151606,21151680-21151736,
21151884-21151950,21151969-21152042,21152176-21152244,
21152323-21152414,21152782-21152860,21153233-21153398,
21153826-21153950,21154089-21154351,21154473-21154569,
21154659-21154820,21154904-21155008,21155935-21156180
Length = 753
Score = 27.1 bits (57), Expect = 9.4
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +2
Query: 248 LCGPSGSGKSTLLKRL 295
+ GP GSGKSTLL +L
Sbjct: 53 IVGPQGSGKSTLLNQL 68
>09_04_0484 +
17990020-17990488,17990930-17991009,17991122-17991586,
17994670-17994756,17994887-17995018,17995102-17995293,
17995409-17995495,17995621-17996295
Length = 728
Score = 27.1 bits (57), Expect = 9.4
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +2
Query: 242 LVLCGPSGSGKSTLLKRL 295
L + GPSG GKSTLL L
Sbjct: 138 LAIMGPSGCGKSTLLDSL 155
>09_04_0483 +
17979566-17980019,17980242-17980321,17980431-17980895,
17981460-17981597,17982574-17982660,17982781-17982909,
17983034-17983225,17983393-17983479,17983707-17984378
Length = 767
Score = 27.1 bits (57), Expect = 9.4
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +2
Query: 242 LVLCGPSGSGKSTLLKRL 295
L + GPSG GKSTLL L
Sbjct: 133 LAIMGPSGCGKSTLLDAL 150
>09_02_0504 -
10013784-10014041,10014558-10014660,10014932-10015093,
10015416-10015549,10015633-10015716,10015839-10016129,
10016362-10016694,10016823-10016965,10017273-10017429,
10017513-10017616,10017728-10017888,10017971-10018287,
10018396-10018677,10018759-10019226,10019338-10019391,
10019689-10019742,10019943-10020021,10020108-10020196,
10021153-10021273,10022321-10022637
Length = 1236
Score = 27.1 bits (57), Expect = 9.4
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +2
Query: 227 KGPRPLVLCGPSGSGKSTLLKRLLKEFPDKFG 322
K R +L GP GSGK++LL L KFG
Sbjct: 173 KPHRMTLLLGPPGSGKTSLLLALAGTSTLKFG 204
>09_01_0131 - 1966406-1966425,1967469-1967901
Length = 150
Score = 27.1 bits (57), Expect = 9.4
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +2
Query: 242 LVLCGPSGSGKSTLLKRLLKEFP 310
L + GPSG GK+TLL L +FP
Sbjct: 126 LAIMGPSGCGKTTLLD-TLADFP 147
>08_02_1554 +
27841801-27842007,27842282-27842455,27842554-27842653,
27843273-27843725,27843936-27844469,27844500-27844580,
27844690-27844781,27844890-27844963,27845071-27845293,
27845429-27845522,27845607-27845761,27845899-27846129,
27846803-27847003,27847257-27847382,27847497-27847558,
27847775-27847892,27848040-27848324,27848475-27848513
Length = 1082
Score = 27.1 bits (57), Expect = 9.4
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +2
Query: 233 PRPLVLCGPSGSGKSTLLKRLLKEFPD 313
P +++ GP GSGK+ L++ K F D
Sbjct: 538 PGHVLVLGPRGSGKTALVRAAAKYFED 564
>07_01_0663 + 4975950-4977688,4978183-4978528
Length = 694
Score = 27.1 bits (57), Expect = 9.4
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +2
Query: 254 GPSGSGKSTLLKRLLKEFPDKFGFSVS 334
GPSG+GKSTLL L + G V+
Sbjct: 70 GPSGAGKSTLLDALAGRIAARLGGRVA 96
>06_03_1333 -
29410014-29410052,29410071-29410322,29410601-29410633,
29411035-29411045,29411420-29415325,29415437-29415920
Length = 1574
Score = 27.1 bits (57), Expect = 9.4
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +2
Query: 248 LCGPSGSGKSTLLKRLLKEFPDKFGFSV 331
+ GP G GK+TL +++ KE + F ++
Sbjct: 298 IVGPGGIGKTTLTQQIYKEVQNHFDVNI 325
>06_03_1068 -
27341103-27341444,27341689-27341929,27342030-27342343,
27342672-27343805
Length = 676
Score = 27.1 bits (57), Expect = 9.4
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +2
Query: 233 PRPLVLCGPSGSGKSTLLKRLLKEFPDKFGFSVS 334
P+ ++L GP G+GK+ L K + E F FS+S
Sbjct: 247 PKGVLLVGPPGTGKTLLAKAIAGEAGVPF-FSIS 279
>06_01_0209 +
1587656-1587876,1587964-1588055,1590520-1590545,
1591130-1591370,1591459-1591554,1591639-1591754,
1591837-1591917,1592597-1592720,1593222-1593271,
1593735-1593825,1594386-1594421,1594502-1594602,
1594684-1594800
Length = 463
Score = 27.1 bits (57), Expect = 9.4
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +2
Query: 221 VQKGPRPLVLCGPSGSGKSTLLKRLLKEFPDKFGFSVS 334
+++ R L+L GP G+GK+ L K + E F F+VS
Sbjct: 220 LRRPARGLLLFGPPGNGKTMLAKAVASESEATF-FNVS 256
>03_04_0206 - 18493178-18495310
Length = 710
Score = 27.1 bits (57), Expect = 9.4
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +2
Query: 248 LCGPSGSGKSTLLKRL 295
L GP+G GKSTLLK L
Sbjct: 188 LVGPNGMGKSTLLKLL 203
>02_01_0672 - 4989053-4990432,4990523-4991410,4995896-4996436,
4996532-4997168,4997266-4997320,4997439-4997675
Length = 1245
Score = 27.1 bits (57), Expect = 9.4
Identities = 25/95 (26%), Positives = 40/95 (42%)
Frame = +2
Query: 221 VQKGPRPLVLCGPSGSGKSTLLKRLLKEFPDKFGFSVSHTTRAPRAGEKNGVHYHFTNLN 400
+Q G + L G SGSGKST++ L++ F D SV R +A + H L
Sbjct: 1022 IQPG-KSTALVGQSGSGKSTII-GLIERFYDPIRGSVKIDGRDIKAYNLRALRRHI-GLV 1078
Query: 401 DMSTAIEKGEFIETAIFSGNIYGTSKKAVDDVRRT 505
+ G E ++ S+ ++D R+
Sbjct: 1079 SQEPTLFAGTIRENIVYGTET--ASEAEIEDAARS 1111
>01_06_0889 -
32741326-32741571,32741671-32741812,32741908-32742218,
32742317-32742446,32742543-32742773,32742918-32742976,
32743077-32743300,32743508-32743559
Length = 464
Score = 27.1 bits (57), Expect = 9.4
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +2
Query: 227 KGPRPLVLCGPSGSGKSTLLKRLLK 301
+ P L++ G G+GKST+LK+++K
Sbjct: 164 RSPVLLLMGGGMGAGKSTVLKQIMK 188
>01_06_0857 -
32507119-32507328,32507936-32508058,32508194-32508262,
32509963-32510238
Length = 225
Score = 27.1 bits (57), Expect = 9.4
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2
Query: 245 VLCGPSGSGKSTLLKRLLKEFPDKFGFSV 331
+L GP+G GKSTLLK ++ F +
Sbjct: 78 MLLGPNGCGKSTLLKVVMPTVESDVAFGL 106
>01_05_0659 -
24061318-24061575,24061664-24061918,24062001-24062172,
24062258-24062381,24062442-24062485,24063601-24063734,
24063822-24063905,24064100-24064390,24064713-24065045,
24065145-24065389,24065644-24065910,24065997-24066157,
24066253-24066569,24066665-24066946,24067024-24067325,
24067398-24067488,24067796-24067849,24067963-24068039,
24068159-24068318,24068653-24068737,24069029-24069238,
24069344-24069732
Length = 1444
Score = 27.1 bits (57), Expect = 9.4
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = +2
Query: 221 VQKGPRPLVLCGPSGSGKSTLLKRLLKEFPDKFGFS 328
+ K R +L GP GSGK+TLL L FS
Sbjct: 195 IVKPRRMTLLLGPPGSGKTTLLLALAGRLGKDIKFS 230
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,513,349
Number of Sequences: 37544
Number of extensions: 227894
Number of successful extensions: 884
Number of sequences better than 10.0: 79
Number of HSP's better than 10.0 without gapping: 831
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 884
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1178343540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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