Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12p10f
         (532 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative calcium/c...    79   9e-17
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           26   0.68 
U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette...    25   1.6  
U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette...    25   1.6  
U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette...    25   1.6  
EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.            23   4.8  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    23   4.8  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    23   8.4  

>CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative
           calcium/calmodulin-dependentprotein kinase, CAKI
           protein.
          Length = 872

 Score = 79.0 bits (186), Expect = 9e-17
 Identities = 34/99 (34%), Positives = 56/99 (56%)
 Frame = +2

Query: 236 RPLVLCGPSGSGKSTLLKRLLKEFPDKFGFSVSHTTRAPRAGEKNGVHYHFTNLNDMSTA 415
           R LVL G  G G+  +   L+ ++PDK+ + + HTTR PR  E+NG  Y+F + ++M   
Sbjct: 693 RTLVLLGAHGVGRRHIKNTLIAKYPDKYAYPIPHTTRPPRPDEENGRSYYFISHDEMMAD 752

Query: 416 IEKGEFIETAIFSGNIYGTSKKAVDDVRRTGKICVLDIE 532
           I   E++E       +YGT  + +  +   GK+ +LD+E
Sbjct: 753 ISANEYLEYGTHEDAMYGTKLETIRRIHADGKMAILDVE 791


>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 26.2 bits (55), Expect = 0.68
 Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 2/29 (6%)
 Frame = +3

Query: 315 SLASVSPIQQEHHGLV--KKTECIIISLT 395
           ++ASVS    +HH  +  +KTEC++IS T
Sbjct: 748 AVASVSHWMAQHHLQIAPEKTECVLISST 776


>U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 25.0 bits (52), Expect = 1.6
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = +2

Query: 221 VQKGPRPLVLCGPSGSGKSTLLKRLLKEFP 310
           V K    L + G SG+GK+TLL  L    P
Sbjct: 122 VAKSGELLAVMGSSGAGKTTLLNALAFRSP 151


>U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 25.0 bits (52), Expect = 1.6
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = +2

Query: 221 VQKGPRPLVLCGPSGSGKSTLLKRLLKEFP 310
           V K    L + G SG+GK+TLL  L    P
Sbjct: 122 VAKSGELLAVMGSSGAGKTTLLNALAFRSP 151


>U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 673

 Score = 25.0 bits (52), Expect = 1.6
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = +2

Query: 221 VQKGPRPLVLCGPSGSGKSTLLKRLLKEFP 310
           V K    L + G SG+GK+TLL  L    P
Sbjct: 100 VAKSGELLAVMGSSGAGKTTLLNALAFRSP 129


>EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.
          Length = 213

 Score = 23.4 bits (48), Expect = 4.8
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = +2

Query: 242 LVLCGPSGSGKSTLLKRLLK 301
           LVL G S  GKS+L+ R +K
Sbjct: 27  LVLLGESAVGKSSLVLRFVK 46


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 23.4 bits (48), Expect = 4.8
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +2

Query: 248 LCGPSGSGKSTLLKRLLKEF 307
           + GP+GSGKS ++  +L  F
Sbjct: 99  IIGPNGSGKSNVIDSMLFVF 118


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 22.6 bits (46), Expect = 8.4
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = -1

Query: 511 FASTTYIIYCFLACSINVSTENCSFYKFTF 422
           F  T+++IYCF++ S    +    F  F F
Sbjct: 28  FLPTSFLIYCFVSPSCLECSSVPLFINFIF 57


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 517,516
Number of Sequences: 2352
Number of extensions: 10102
Number of successful extensions: 27
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 49051644
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)