Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12p10f
(532 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U88169-6|AAB42236.2| 216|Caenorhabditis elegans Hypothetical pr... 137 5e-33
U88169-7|ABQ13064.1| 205|Caenorhabditis elegans Hypothetical pr... 136 9e-33
Z50873-2|CAA90759.2| 620|Caenorhabditis elegans Hypothetical pr... 80 1e-15
Z50873-1|CAA90760.2| 961|Caenorhabditis elegans Hypothetical pr... 80 1e-15
X92565-1|CAA63315.1| 620|Caenorhabditis elegans LIN-2B protein. 80 1e-15
X92564-1|CAA63314.1| 961|Caenorhabditis elegans LIN-2A protein. 80 1e-15
U39742-7|AAK39197.2| 967|Caenorhabditis elegans Drosophila disc... 78 3e-15
AJ295228-1|CAC35153.1| 967|Caenorhabditis elegans MAGUK protein... 78 3e-15
AF406786-1|AAL01376.1| 967|Caenorhabditis elegans SAP97-like pr... 78 3e-15
U53147-4|AAA96115.1| 668|Caenorhabditis elegans Temporarily ass... 77 8e-15
AC024824-6|AAK85504.2| 567|Caenorhabditis elegans Hypothetical ... 74 7e-14
U80445-11|AAB37801.2| 479|Caenorhabditis elegans Hypothetical p... 67 8e-12
Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical pr... 54 8e-08
Z70307-13|CAA94339.1| 354|Caenorhabditis elegans Hypothetical p... 33 0.13
Z73971-10|CAA98251.1| 838|Caenorhabditis elegans Hypothetical p... 31 0.39
U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy ch... 31 0.39
U33934-1|AAA96507.1| 838|Caenorhabditis elegans MEC-9L protein. 31 0.39
U33933-1|AAA96506.1| 838|Caenorhabditis elegans MEC-9L protein. 31 0.39
L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy ch... 31 0.39
Z70265-1|CAA94202.1| 1283|Caenorhabditis elegans Hypothetical pr... 31 0.68
AL132949-7|CAB61080.1| 1168|Caenorhabditis elegans Hypothetical ... 31 0.68
Z48585-2|CAA88479.1| 222|Caenorhabditis elegans Hypothetical pr... 30 0.90
AC025721-7|AAK29911.3| 668|Caenorhabditis elegans Half transpor... 30 0.90
AF059715-1|AAF05624.1| 813|Caenorhabditis elegans cell survival... 30 1.2
Z82059-12|CAB04880.1| 622|Caenorhabditis elegans Hypothetical p... 29 2.1
Z77666-6|CAB01232.1| 1321|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z75537-2|CAA99835.1| 622|Caenorhabditis elegans Hypothetical pr... 29 2.1
X65054-1|CAA46190.1| 1321|Caenorhabditis elegans P-glycoprotein ... 29 2.1
U20783-1|AAC46845.1| 535|Caenorhabditis elegans unknown protein. 29 2.1
AL117203-4|CAB55106.2| 813|Caenorhabditis elegans Hypothetical ... 29 2.1
AL032665-2|CAA21772.1| 622|Caenorhabditis elegans Hypothetical ... 29 2.1
U40959-3|AAA81767.2| 445|Caenorhabditis elegans Hypothetical pr... 29 2.7
U28928-7|AAA68339.1| 665|Caenorhabditis elegans Peroxisomal mem... 29 2.7
AL117200-9|CAB60586.1| 807|Caenorhabditis elegans Hypothetical ... 29 2.7
Z99281-23|CAE18026.1| 302|Caenorhabditis elegans Hypothetical p... 28 4.8
Z82078-7|CAB04947.3| 801|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z75713-7|CAD56596.1| 475|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z75713-6|CAB00052.1| 472|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z70268-6|CAA94221.2| 1243|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z70265-4|CAA94203.2| 1243|Caenorhabditis elegans Hypothetical pr... 28 4.8
L25423-1|AAA28109.1| 472|Caenorhabditis elegans mei-1 protein. 28 4.8
AF497514-1|AAM33381.1| 801|Caenorhabditis elegans heavy metal t... 28 4.8
AF497513-1|AAM33380.1| 801|Caenorhabditis elegans heavy metal t... 28 4.8
AF490977-1|AAQ06435.1| 801|Caenorhabditis elegans ABC6 protein ... 28 4.8
Z99281-28|CAB16503.1| 633|Caenorhabditis elegans Hypothetical p... 27 6.3
Z92803-6|CAB07240.1| 215|Caenorhabditis elegans Hypothetical pr... 27 6.3
Z70268-5|CAJ85767.2| 1204|Caenorhabditis elegans Hypothetical pr... 27 6.3
Z70268-4|CAA94220.3| 1263|Caenorhabditis elegans Hypothetical pr... 27 6.3
Z70268-3|CAA94219.3| 1263|Caenorhabditis elegans Hypothetical pr... 27 6.3
U28928-8|AAA68340.1| 661|Caenorhabditis elegans Peroxisomal mem... 27 6.3
AF106573-7|AAC78158.1| 838|Caenorhabditis elegans Hypothetical ... 27 6.3
Z67882-3|CAA91800.2| 1324|Caenorhabditis elegans Hypothetical pr... 27 8.4
Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical pr... 27 8.4
AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosenso... 27 8.4
AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosenso... 27 8.4
AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensor... 27 8.4
AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensor... 27 8.4
AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensor... 27 8.4
AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensor... 27 8.4
AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensor... 27 8.4
AC024843-12|AAF60833.3| 986|Caenorhabditis elegans Hypothetical... 27 8.4
>U88169-6|AAB42236.2| 216|Caenorhabditis elegans Hypothetical
protein T03F1.8a protein.
Length = 216
Score = 137 bits (331), Expect = 5e-33
Identities = 63/105 (60%), Positives = 79/105 (75%), Gaps = 1/105 (0%)
Frame = +2
Query: 221 VQKGP-RPLVLCGPSGSGKSTLLKRLLKEFPDKFGFSVSHTTRAPRAGEKNGVHYHFTNL 397
++K P RP+VL GPSG GKST+L R ++E+P+ F FSVSHTTR PRAGE++G HY+FT
Sbjct: 19 IRKMPCRPIVLSGPSGGGKSTILTRAMQEYPNSFAFSVSHTTRQPRAGEEHGKHYYFTEK 78
Query: 398 NDMSTAIEKGEFIETAIFSGNIYGTSKKAVDDVRRTGKICVLDIE 532
M I+ EF+E A FSGN YGTSKK V ++ +GKICVLDIE
Sbjct: 79 EKMQEMIKNNEFLEFATFSGNTYGTSKKTVLEIENSGKICVLDIE 123
>U88169-7|ABQ13064.1| 205|Caenorhabditis elegans Hypothetical
protein T03F1.8b protein.
Length = 205
Score = 136 bits (329), Expect = 9e-33
Identities = 61/99 (61%), Positives = 75/99 (75%)
Frame = +2
Query: 236 RPLVLCGPSGSGKSTLLKRLLKEFPDKFGFSVSHTTRAPRAGEKNGVHYHFTNLNDMSTA 415
RP+VL GPSG GKST+L R ++E+P+ F FSVSHTTR PRAGE++G HY+FT M
Sbjct: 14 RPIVLSGPSGGGKSTILTRAMQEYPNSFAFSVSHTTRQPRAGEEHGKHYYFTEKEKMQEM 73
Query: 416 IEKGEFIETAIFSGNIYGTSKKAVDDVRRTGKICVLDIE 532
I+ EF+E A FSGN YGTSKK V ++ +GKICVLDIE
Sbjct: 74 IKNNEFLEFATFSGNTYGTSKKTVLEIENSGKICVLDIE 112
>Z50873-2|CAA90759.2| 620|Caenorhabditis elegans Hypothetical
protein F17E5.1b protein.
Length = 620
Score = 79.8 bits (188), Expect = 1e-15
Identities = 33/99 (33%), Positives = 56/99 (56%)
Frame = +2
Query: 236 RPLVLCGPSGSGKSTLLKRLLKEFPDKFGFSVSHTTRAPRAGEKNGVHYHFTNLNDMSTA 415
+ LVL G G G+ + L+ P++F + + HTTR PR E +G HY+F M
Sbjct: 434 KTLVLLGAHGVGRRHIKNTLIHRHPNRFAYPIPHTTRPPRKDEVDGKHYYFVTNEQMMAD 493
Query: 416 IEKGEFIETAIFSGNIYGTSKKAVDDVRRTGKICVLDIE 532
I+ E++E ++YGT + + ++ ++GKI +LD+E
Sbjct: 494 IQNNEYLEYGTHEESMYGTKLETIRNIHKSGKIAILDVE 532
>Z50873-1|CAA90760.2| 961|Caenorhabditis elegans Hypothetical protein
F17E5.1a protein.
Length = 961
Score = 79.8 bits (188), Expect = 1e-15
Identities = 33/99 (33%), Positives = 56/99 (56%)
Frame = +2
Query: 236 RPLVLCGPSGSGKSTLLKRLLKEFPDKFGFSVSHTTRAPRAGEKNGVHYHFTNLNDMSTA 415
+ LVL G G G+ + L+ P++F + + HTTR PR E +G HY+F M
Sbjct: 775 KTLVLLGAHGVGRRHIKNTLIHRHPNRFAYPIPHTTRPPRKDEVDGKHYYFVTNEQMMAD 834
Query: 416 IEKGEFIETAIFSGNIYGTSKKAVDDVRRTGKICVLDIE 532
I+ E++E ++YGT + + ++ ++GKI +LD+E
Sbjct: 835 IQNNEYLEYGTHEESMYGTKLETIRNIHKSGKIAILDVE 873
>X92565-1|CAA63315.1| 620|Caenorhabditis elegans LIN-2B protein.
Length = 620
Score = 79.8 bits (188), Expect = 1e-15
Identities = 33/99 (33%), Positives = 56/99 (56%)
Frame = +2
Query: 236 RPLVLCGPSGSGKSTLLKRLLKEFPDKFGFSVSHTTRAPRAGEKNGVHYHFTNLNDMSTA 415
+ LVL G G G+ + L+ P++F + + HTTR PR E +G HY+F M
Sbjct: 434 KTLVLLGAHGVGRRHIKNTLIHRHPNRFAYPIPHTTRPPRKDEVDGKHYYFVTNEQMMAD 493
Query: 416 IEKGEFIETAIFSGNIYGTSKKAVDDVRRTGKICVLDIE 532
I+ E++E ++YGT + + ++ ++GKI +LD+E
Sbjct: 494 IQNNEYLEYGTHEESMYGTKLETIRNIHKSGKIAILDVE 532
>X92564-1|CAA63314.1| 961|Caenorhabditis elegans LIN-2A protein.
Length = 961
Score = 79.8 bits (188), Expect = 1e-15
Identities = 33/99 (33%), Positives = 56/99 (56%)
Frame = +2
Query: 236 RPLVLCGPSGSGKSTLLKRLLKEFPDKFGFSVSHTTRAPRAGEKNGVHYHFTNLNDMSTA 415
+ LVL G G G+ + L+ P++F + + HTTR PR E +G HY+F M
Sbjct: 775 KTLVLLGAHGVGRRHIKNTLIHRHPNRFAYPIPHTTRPPRKDEVDGKHYYFVTNEQMMAD 834
Query: 416 IEKGEFIETAIFSGNIYGTSKKAVDDVRRTGKICVLDIE 532
I+ E++E ++YGT + + ++ ++GKI +LD+E
Sbjct: 835 IQNNEYLEYGTHEESMYGTKLETIRNIHKSGKIAILDVE 873
>U39742-7|AAK39197.2| 967|Caenorhabditis elegans Drosophila discs
large homologprotein 1, isoform a protein.
Length = 967
Score = 78.2 bits (184), Expect = 3e-15
Identities = 38/98 (38%), Positives = 55/98 (56%)
Frame = +2
Query: 236 RPLVLCGPSGSGKSTLLKRLLKEFPDKFGFSVSHTTRAPRAGEKNGVHYHFTNLNDMSTA 415
RP+++ G K + L+ P KF V HT+R PR GE NG Y+F N ++M
Sbjct: 770 RPVIILGAL---KDRINDELVNRDPSKFSSCVPHTSRPPREGEVNGRDYYFVNKHNMEED 826
Query: 416 IEKGEFIETAIFSGNIYGTSKKAVDDVRRTGKICVLDI 529
++ FIE F N+YGTS ++V DV G+ C+LD+
Sbjct: 827 VKNNLFIEAGQFQNNLYGTSIQSVRDVANQGRHCILDV 864
>AJ295228-1|CAC35153.1| 967|Caenorhabditis elegans MAGUK protein
DLG-1 protein.
Length = 967
Score = 78.2 bits (184), Expect = 3e-15
Identities = 38/98 (38%), Positives = 55/98 (56%)
Frame = +2
Query: 236 RPLVLCGPSGSGKSTLLKRLLKEFPDKFGFSVSHTTRAPRAGEKNGVHYHFTNLNDMSTA 415
RP+++ G K + L+ P KF V HT+R PR GE NG Y+F N ++M
Sbjct: 770 RPVIILGAL---KDRINDELVNRDPSKFSSCVPHTSRPPREGEVNGRDYYFVNKHNMEED 826
Query: 416 IEKGEFIETAIFSGNIYGTSKKAVDDVRRTGKICVLDI 529
++ FIE F N+YGTS ++V DV G+ C+LD+
Sbjct: 827 VKNNLFIEAGQFQNNLYGTSIQSVRDVANQGRHCILDV 864
>AF406786-1|AAL01376.1| 967|Caenorhabditis elegans SAP97-like protein
DLG-1 protein.
Length = 967
Score = 78.2 bits (184), Expect = 3e-15
Identities = 38/98 (38%), Positives = 55/98 (56%)
Frame = +2
Query: 236 RPLVLCGPSGSGKSTLLKRLLKEFPDKFGFSVSHTTRAPRAGEKNGVHYHFTNLNDMSTA 415
RP+++ G K + L+ P KF V HT+R PR GE NG Y+F N ++M
Sbjct: 770 RPVIILGAL---KDRINDELVNRDPSKFSSCVPHTSRPPREGEVNGRDYYFVNKHNMEED 826
Query: 416 IEKGEFIETAIFSGNIYGTSKKAVDDVRRTGKICVLDI 529
++ FIE F N+YGTS ++V DV G+ C+LD+
Sbjct: 827 VKNNLFIEAGQFQNNLYGTSIQSVRDVANQGRHCILDV 864
>U53147-4|AAA96115.1| 668|Caenorhabditis elegans Temporarily
assigned gene nameprotein 117 protein.
Length = 668
Score = 77.0 bits (181), Expect = 8e-15
Identities = 39/99 (39%), Positives = 54/99 (54%)
Frame = +2
Query: 236 RPLVLCGPSGSGKSTLLKRLLKEFPDKFGFSVSHTTRAPRAGEKNGVHYHFTNLNDMSTA 415
RP+VLCG G G L RLL+ V +T+R P+ GE NGVHYHF +
Sbjct: 471 RPIVLCGAEGVGCLKLRDRLLESDRITLACPVPYTSRTPKEGEFNGVHYHFVSKQKFHED 530
Query: 416 IEKGEFIETAIFSGNIYGTSKKAVDDVRRTGKICVLDIE 532
+ G+F+E + YGT+KK V +V GK CV+ ++
Sbjct: 531 AKSGKFVEFGEYQKFWYGTAKKDVVNVIERGKTCVMTLK 569
>AC024824-6|AAK85504.2| 567|Caenorhabditis elegans Hypothetical
protein Y55B1BR.4 protein.
Length = 567
Score = 73.7 bits (173), Expect = 7e-14
Identities = 34/97 (35%), Positives = 57/97 (58%)
Frame = +2
Query: 224 QKGPRPLVLCGPSGSGKSTLLKRLLKEFPDKFGFSVSHTTRAPRAGEKNGVHYHFTNLND 403
+K R +VL G G G++ + ++ K F D+F ++ HT+R R E +GV+Y+FT+ ++
Sbjct: 340 KKRRRVVVLLGAPGVGRNEIRRQFFKVFADRFTNAIPHTSRPQRPNESDGVNYYFTSRSE 399
Query: 404 MSTAIEKGEFIETAIFSGNIYGTSKKAVDDVRRTGKI 514
M IE+ E +E F N+YGT+ K+V G +
Sbjct: 400 MERMIERKEMLEYGEFRDNLYGTALKSVRKASEKGTV 436
>U80445-11|AAB37801.2| 479|Caenorhabditis elegans Hypothetical
protein C50F2.8 protein.
Length = 479
Score = 66.9 bits (156), Expect = 8e-12
Identities = 36/99 (36%), Positives = 51/99 (51%)
Frame = +2
Query: 230 GPRPLVLCGPSGSGKSTLLKRLLKEFPDKFGFSVSHTTRAPRAGEKNGVHYHFTNLNDMS 409
G R LVL G G+G+ + LL+ P F V T+RA R GE G Y F ++
Sbjct: 282 GRRTLVLLGAVGTGRRDIKSMLLRLAPHYFSTIVPLTSRAQRPGEVEGREYQFVRKEEIY 341
Query: 410 TAIEKGEFIETAIFSGNIYGTSKKAVDDVRRTGKICVLD 526
I +G +E +YGTS +V + R+G++CVLD
Sbjct: 342 QKIREGGMVEWGELDSQLYGTSADSVRNEIRSGRMCVLD 380
>Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical
protein K01A6.2 protein.
Length = 1092
Score = 53.6 bits (123), Expect = 8e-08
Identities = 19/51 (37%), Positives = 34/51 (66%)
Frame = +2
Query: 326 SVSHTTRAPRAGEKNGVHYHFTNLNDMSTAIEKGEFIETAIFSGNIYGTSK 478
+V +TTR PR GE +G HY F +++D + ++ G+ +E + G++YGT +
Sbjct: 231 TVPYTTRPPREGEVDGEHYRFVSVDDFNKLLDSGDLLENGTYQGHLYGTPR 281
>Z70307-13|CAA94339.1| 354|Caenorhabditis elegans Hypothetical
protein C39E9.13 protein.
Length = 354
Score = 33.1 bits (72), Expect = 0.13
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = +2
Query: 242 LVLCGPSGSGKSTLLKRLLKEFPDKFGFSVSHT 340
L+ CGPSG+GK T +K LL+E +G V T
Sbjct: 40 LLFCGPSGAGKKTRIKCLLREL---YGVGVEKT 69
>Z73971-10|CAA98251.1| 838|Caenorhabditis elegans Hypothetical
protein C50H2.3 protein.
Length = 838
Score = 31.5 bits (68), Expect = 0.39
Identities = 11/31 (35%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +1
Query: 436 RNCNF-QWKHLWNKQESSR*CTSYWQNMCAG 525
+ CN +W+H W + S+ C S+W + C G
Sbjct: 470 KECNGGRWRHQWYFDKGSKKCFSFWYDGCKG 500
>U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy chain
protein 1 protein.
Length = 4568
Score = 31.5 bits (68), Expect = 0.39
Identities = 15/21 (71%), Positives = 17/21 (80%), Gaps = 1/21 (4%)
Frame = +2
Query: 236 RPLVLCGPSGSGKS-TLLKRL 295
+PLVLCGP GSGK+ TLL L
Sbjct: 2531 KPLVLCGPPGSGKTMTLLAAL 2551
>U33934-1|AAA96507.1| 838|Caenorhabditis elegans MEC-9L protein.
Length = 838
Score = 31.5 bits (68), Expect = 0.39
Identities = 11/31 (35%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +1
Query: 436 RNCNF-QWKHLWNKQESSR*CTSYWQNMCAG 525
+ CN +W+H W + S+ C S+W + C G
Sbjct: 470 KECNGGRWRHQWYFDKGSKKCFSFWYDGCKG 500
>U33933-1|AAA96506.1| 838|Caenorhabditis elegans MEC-9L protein.
Length = 838
Score = 31.5 bits (68), Expect = 0.39
Identities = 11/31 (35%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +1
Query: 436 RNCNF-QWKHLWNKQESSR*CTSYWQNMCAG 525
+ CN +W+H W + S+ C S+W + C G
Sbjct: 470 KECNGGRWRHQWYFDKGSKKCFSFWYDGCKG 500
>L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy chain
protein.
Length = 4568
Score = 31.5 bits (68), Expect = 0.39
Identities = 15/21 (71%), Positives = 17/21 (80%), Gaps = 1/21 (4%)
Frame = +2
Query: 236 RPLVLCGPSGSGKS-TLLKRL 295
+PLVLCGP GSGK+ TLL L
Sbjct: 2531 KPLVLCGPPGSGKTMTLLAAL 2551
>Z70265-1|CAA94202.1| 1283|Caenorhabditis elegans Hypothetical protein
C05A9.1 protein.
Length = 1283
Score = 30.7 bits (66), Expect = 0.68
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = +2
Query: 236 RPLVLCGPSGSGKSTLLKRLLKEF 307
R L L GPSGSGKST++ LL+ F
Sbjct: 1065 RTLALVGPSGSGKSTIIS-LLERF 1087
>AL132949-7|CAB61080.1| 1168|Caenorhabditis elegans Hypothetical
protein Y53F4B.9 protein.
Length = 1168
Score = 30.7 bits (66), Expect = 0.68
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +2
Query: 239 PLVLCGPSGSGKSTLLKRLLKE 304
PLVL GPSG GK+ L + L K+
Sbjct: 818 PLVLIGPSGVGKTALFRALAKQ 839
>Z48585-2|CAA88479.1| 222|Caenorhabditis elegans Hypothetical
protein ZK673.2 protein.
Length = 222
Score = 30.3 bits (65), Expect = 0.90
Identities = 22/81 (27%), Positives = 37/81 (45%)
Frame = +2
Query: 242 LVLCGPSGSGKSTLLKRLLKEFPDKFGFSVSHTTRAPRAGEKNGVHYHFTNLNDMSTAIE 421
++L G +GSGK T+ + L++EF + GF+ R G + + +
Sbjct: 4 VLLSGAAGSGKGTIARMLVREF-EPLGFNYFAAGDFIRDHIARGTEFGVR----AQSFLN 58
Query: 422 KGEFIETAIFSGNIYGTSKKA 484
KGE + +I +G I KA
Sbjct: 59 KGEHVPDSILNGAILAEMLKA 79
>AC025721-7|AAK29911.3| 668|Caenorhabditis elegans Half transporter
(pgp related)protein 6 protein.
Length = 668
Score = 30.3 bits (65), Expect = 0.90
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +2
Query: 242 LVLCGPSGSGKSTLLKRLLKEFPDKFG 322
+ LCGPSG GKST+ L + + K G
Sbjct: 456 VALCGPSGEGKSTITHLLERFYEPKSG 482
>AF059715-1|AAF05624.1| 813|Caenorhabditis elegans cell survival
CED-4-interactingprotein MAC-1 protein.
Length = 813
Score = 29.9 bits (64), Expect = 1.2
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +2
Query: 233 PRPLVLCGPSGSGKSTLLKRLLKEFPDKFGFSV 331
P+ ++LCGP G GK+ L K + E F FSV
Sbjct: 568 PQGILLCGPPGCGKTLLAKAVANETGMNF-FSV 599
>Z82059-12|CAB04880.1| 622|Caenorhabditis elegans Hypothetical
protein T27E9.7 protein.
Length = 622
Score = 29.1 bits (62), Expect = 2.1
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +2
Query: 242 LVLCGPSGSGKSTLLKRLLKEFPDKFGFSVSHT 340
+ L GP+G+GKSTLLK L + G H+
Sbjct: 424 IALVGPNGAGKSTLLKLLCTDVMPTDGLIRRHS 456
>Z77666-6|CAB01232.1| 1321|Caenorhabditis elegans Hypothetical protein
K08E7.9 protein.
Length = 1321
Score = 29.1 bits (62), Expect = 2.1
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +2
Query: 242 LVLCGPSGSGKSTLLKRLLKEFPDKFG 322
L L GPSG GKST++ LL+ F D G
Sbjct: 1108 LALVGPSGCGKSTVV-ALLERFYDTLG 1133
>Z75537-2|CAA99835.1| 622|Caenorhabditis elegans Hypothetical
protein F18E2.2 protein.
Length = 622
Score = 29.1 bits (62), Expect = 2.1
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +2
Query: 242 LVLCGPSGSGKSTLLKRLLKEFPDKFGFSVSHTT 343
+ + GP+G GKSTLLK L+ + G H T
Sbjct: 433 IAIVGPNGVGKSTLLKLLIGKIDPNDGELRKHRT 466
>X65054-1|CAA46190.1| 1321|Caenorhabditis elegans P-glycoprotein A
protein.
Length = 1321
Score = 29.1 bits (62), Expect = 2.1
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +2
Query: 242 LVLCGPSGSGKSTLLKRLLKEFPDKFG 322
L L GPSG GKST++ LL+ F D G
Sbjct: 1108 LALVGPSGCGKSTVV-ALLERFYDTLG 1133
>U20783-1|AAC46845.1| 535|Caenorhabditis elegans unknown protein.
Length = 535
Score = 29.1 bits (62), Expect = 2.1
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +2
Query: 242 LVLCGPSGSGKSTLLKRLLKEFPDKFGFSVSHT 340
+ L GP+G+GKSTLLK L + G H+
Sbjct: 423 IALVGPNGAGKSTLLKLLCTDVMPTDGLIRRHS 455
>AL117203-4|CAB55106.2| 813|Caenorhabditis elegans Hypothetical
protein Y48C3A.7 protein.
Length = 813
Score = 29.1 bits (62), Expect = 2.1
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +2
Query: 233 PRPLVLCGPSGSGKSTLLKRLLKE 304
P+ ++LCGP G GK+ L K + E
Sbjct: 568 PQGILLCGPPGCGKTLLAKAVANE 591
>AL032665-2|CAA21772.1| 622|Caenorhabditis elegans Hypothetical
protein T27E9.7 protein.
Length = 622
Score = 29.1 bits (62), Expect = 2.1
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +2
Query: 242 LVLCGPSGSGKSTLLKRLLKEFPDKFGFSVSHT 340
+ L GP+G+GKSTLLK L + G H+
Sbjct: 424 IALVGPNGAGKSTLLKLLCTDVMPTDGLIRRHS 456
>U40959-3|AAA81767.2| 445|Caenorhabditis elegans Hypothetical
protein B0310.3 protein.
Length = 445
Score = 28.7 bits (61), Expect = 2.7
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = -1
Query: 379 MHSVFFTSPWCSCCMGDTEAKLVGKFF 299
M F +PW +CC T A +V ++F
Sbjct: 37 MEGNFLNNPWINCCFVTTYAGVVAQYF 63
>U28928-7|AAA68339.1| 665|Caenorhabditis elegans Peroxisomal
membrane protein relatedprotein 1 protein.
Length = 665
Score = 28.7 bits (61), Expect = 2.7
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +2
Query: 236 RPLVLCGPSGSGKSTLLKRLLKEFP 310
R +++CGP+G GKS+L + L + +P
Sbjct: 473 RNVLVCGPNGCGKSSLFRTLGELWP 497
>AL117200-9|CAB60586.1| 807|Caenorhabditis elegans Hypothetical
protein Y50E8A.16 protein.
Length = 807
Score = 28.7 bits (61), Expect = 2.7
Identities = 21/93 (22%), Positives = 42/93 (45%)
Frame = +2
Query: 236 RPLVLCGPSGSGKSTLLKRLLKEFPDKFGFSVSHTTRAPRAGEKNGVHYHFTNLNDMSTA 415
+ + L GPSG+GKSTL+ + + + + G + T + +HYH TN+ +
Sbjct: 578 KTIALVGPSGNGKSTLVSLIQQFYTPQSGRILIDGTPIQNI---DHLHYH-TNI---ALV 630
Query: 416 IEKGEFIETAIFSGNIYGTSKKAVDDVRRTGKI 514
++ + +YG +D+ R ++
Sbjct: 631 AQEPTLFSGTVRENILYGLENGTDEDMMRVAEM 663
>Z99281-23|CAE18026.1| 302|Caenorhabditis elegans Hypothetical
protein Y57G11C.43 protein.
Length = 302
Score = 27.9 bits (59), Expect = 4.8
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +2
Query: 242 LVLCGPSGSGKSTLLKRLLKEFPDK 316
+++ G SGKST++ RL K+F +K
Sbjct: 4 IIVTGHPSSGKSTVVDRLAKKFEEK 28
>Z82078-7|CAB04947.3| 801|Caenorhabditis elegans Hypothetical
protein W09D6.6 protein.
Length = 801
Score = 27.9 bits (59), Expect = 4.8
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +2
Query: 242 LVLCGPSGSGKSTLLKRLLKEFPDKFG 322
+ L G SGSGKSTL++ L + F G
Sbjct: 579 VALVGSSGSGKSTLIRLLFRLFESTEG 605
>Z75713-7|CAD56596.1| 475|Caenorhabditis elegans Hypothetical
protein T01G9.5b protein.
Length = 475
Score = 27.9 bits (59), Expect = 4.8
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +2
Query: 236 RPLVLCGPSGSGKSTLLKRLLKEFPDKFGFSVSHT 340
+ +VL GP G+GK+ + + + E F F+VS T
Sbjct: 227 KAMVLAGPPGTGKTLIARAIASESSSTF-FTVSST 260
>Z75713-6|CAB00052.1| 472|Caenorhabditis elegans Hypothetical
protein T01G9.5a protein.
Length = 472
Score = 27.9 bits (59), Expect = 4.8
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +2
Query: 236 RPLVLCGPSGSGKSTLLKRLLKEFPDKFGFSVSHT 340
+ +VL GP G+GK+ + + + E F F+VS T
Sbjct: 227 KAMVLAGPPGTGKTLIARAIASESSSTF-FTVSST 260
>Z70268-6|CAA94221.2| 1243|Caenorhabditis elegans Hypothetical protein
T21E8.3 protein.
Length = 1243
Score = 27.9 bits (59), Expect = 4.8
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +2
Query: 236 RPLVLCGPSGSGKSTLLKRL 295
+ L + GPSGSGKST++ L
Sbjct: 1031 KTLAIVGPSGSGKSTIISLL 1050
>Z70265-4|CAA94203.2| 1243|Caenorhabditis elegans Hypothetical protein
T21E8.3 protein.
Length = 1243
Score = 27.9 bits (59), Expect = 4.8
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +2
Query: 236 RPLVLCGPSGSGKSTLLKRL 295
+ L + GPSGSGKST++ L
Sbjct: 1031 KTLAIVGPSGSGKSTIISLL 1050
>L25423-1|AAA28109.1| 472|Caenorhabditis elegans mei-1 protein.
Length = 472
Score = 27.9 bits (59), Expect = 4.8
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +2
Query: 236 RPLVLCGPSGSGKSTLLKRLLKEFPDKFGFSVSHT 340
+ +VL GP G+GK+ + + + E F F+VS T
Sbjct: 227 KAMVLAGPPGTGKTLIARAIASESSSTF-FTVSST 260
>AF497514-1|AAM33381.1| 801|Caenorhabditis elegans heavy metal
tolerance factor 1 protein.
Length = 801
Score = 27.9 bits (59), Expect = 4.8
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +2
Query: 242 LVLCGPSGSGKSTLLKRLLKEFPDKFG 322
+ L G SGSGKSTL++ L + F G
Sbjct: 579 VALVGSSGSGKSTLIRLLFRLFESTEG 605
>AF497513-1|AAM33380.1| 801|Caenorhabditis elegans heavy metal
tolerance factor 1 protein.
Length = 801
Score = 27.9 bits (59), Expect = 4.8
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +2
Query: 242 LVLCGPSGSGKSTLLKRLLKEFPDKFG 322
+ L G SGSGKSTL++ L + F G
Sbjct: 579 VALVGSSGSGKSTLIRLLFRLFESTEG 605
>AF490977-1|AAQ06435.1| 801|Caenorhabditis elegans ABC6 protein
protein.
Length = 801
Score = 27.9 bits (59), Expect = 4.8
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +2
Query: 242 LVLCGPSGSGKSTLLKRLLKEFPDKFG 322
+ L G SGSGKSTL++ L + F G
Sbjct: 579 VALVGSSGSGKSTLIRLLFRLFESTEG 605
>Z99281-28|CAB16503.1| 633|Caenorhabditis elegans Hypothetical
protein Y57G11C.1 protein.
Length = 633
Score = 27.5 bits (58), Expect = 6.3
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = +2
Query: 236 RPLVLCGPSGSGKSTLLKRLLKEF 307
+ + L GPSG+GKSTL+ L+++F
Sbjct: 402 KTVALVGPSGNGKSTLVS-LIQQF 424
>Z92803-6|CAB07240.1| 215|Caenorhabditis elegans Hypothetical
protein K01G5.4 protein.
Length = 215
Score = 27.5 bits (58), Expect = 6.3
Identities = 14/27 (51%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Frame = +2
Query: 242 LVLCGPSGSGKSTLLKR-LLKEFPDKF 319
LVL G G+GK+T +KR L EF K+
Sbjct: 12 LVLVGDGGTGKTTFVKRHLTGEFEKKY 38
>Z70268-5|CAJ85767.2| 1204|Caenorhabditis elegans Hypothetical protein
T21E8.1b protein.
Length = 1204
Score = 27.5 bits (58), Expect = 6.3
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +2
Query: 236 RPLVLCGPSGSGKSTLLKRLLKEF 307
+ L L GPSG GKST++ LL+ F
Sbjct: 986 KTLALVGPSGCGKSTIIS-LLERF 1008
>Z70268-4|CAA94220.3| 1263|Caenorhabditis elegans Hypothetical protein
T21E8.1a protein.
Length = 1263
Score = 27.5 bits (58), Expect = 6.3
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +2
Query: 236 RPLVLCGPSGSGKSTLLKRLLKEF 307
+ L L GPSG GKST++ LL+ F
Sbjct: 1045 KTLALVGPSGCGKSTIIS-LLERF 1067
>Z70268-3|CAA94219.3| 1263|Caenorhabditis elegans Hypothetical protein
T21E8.2 protein.
Length = 1263
Score = 27.5 bits (58), Expect = 6.3
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +2
Query: 236 RPLVLCGPSGSGKSTLLKRLLKEF 307
+ L L GPSG GKST++ LL+ F
Sbjct: 1045 KTLALVGPSGCGKSTIIS-LLERF 1067
>U28928-8|AAA68340.1| 661|Caenorhabditis elegans Peroxisomal
membrane protein relatedprotein 2 protein.
Length = 661
Score = 27.5 bits (58), Expect = 6.3
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +2
Query: 242 LVLCGPSGSGKSTLLKRLLKEFPDKFG 322
+++CGP+G GKS+L R+L E FG
Sbjct: 471 VLVCGPNGCGKSSLF-RVLGELWPLFG 496
>AF106573-7|AAC78158.1| 838|Caenorhabditis elegans Hypothetical
protein F52D2.6 protein.
Length = 838
Score = 27.5 bits (58), Expect = 6.3
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = -1
Query: 232 PFLNHCSNKEFQER-G*GCYSVFSKR*NHKIWQWLLIFK 119
P C++ +R G C V++ N+K+W+WL +FK
Sbjct: 596 PVFTDCNDCPTPKRSGFNC-EVWTAEVNNKVWRWLSLFK 633
>Z67882-3|CAA91800.2| 1324|Caenorhabditis elegans Hypothetical protein
F22E10.2 protein.
Length = 1324
Score = 27.1 bits (57), Expect = 8.4
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +2
Query: 242 LVLCGPSGSGKSTLLKRLLKEFPDKFG 322
+ L GPSGSGKST + +L+ F D G
Sbjct: 1114 VALVGPSGSGKSTCI-GMLERFYDVTG 1139
>Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical
protein C06A1.1 protein.
Length = 809
Score = 27.1 bits (57), Expect = 8.4
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +2
Query: 227 KGPRPLVLCGPSGSGKSTLLKRLLKEFPDKFGFSVS 334
K PR ++L GP G+GK TL+ R + F F ++
Sbjct: 242 KPPRGILLFGPPGTGK-TLIARAVANETGSFFFLIN 276
>AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform g protein.
Length = 1604
Score = 27.1 bits (57), Expect = 8.4
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +1
Query: 451 QWKHLWNKQESSR*CTSYWQNMC 519
QW W +SS C+S+W + C
Sbjct: 1071 QWTEKWYFDQSSGDCSSFWWDEC 1093
>AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform f protein.
Length = 1818
Score = 27.1 bits (57), Expect = 8.4
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +1
Query: 451 QWKHLWNKQESSR*CTSYWQNMC 519
QW W +SS C+S+W + C
Sbjct: 1285 QWTEKWYFDQSSGDCSSFWWDEC 1307
>AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform e protein.
Length = 1954
Score = 27.1 bits (57), Expect = 8.4
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +1
Query: 451 QWKHLWNKQESSR*CTSYWQNMC 519
QW W +SS C+S+W + C
Sbjct: 1421 QWTEKWYFDQSSGDCSSFWWDEC 1443
>AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform b protein.
Length = 1685
Score = 27.1 bits (57), Expect = 8.4
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +1
Query: 451 QWKHLWNKQESSR*CTSYWQNMC 519
QW W +SS C+S+W + C
Sbjct: 1470 QWTEKWYFDQSSGDCSSFWWDEC 1492
>AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform d protein.
Length = 1995
Score = 27.1 bits (57), Expect = 8.4
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +1
Query: 451 QWKHLWNKQESSR*CTSYWQNMC 519
QW W +SS C+S+W + C
Sbjct: 1462 QWTEKWYFDQSSGDCSSFWWDEC 1484
>AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform h protein.
Length = 2006
Score = 27.1 bits (57), Expect = 8.4
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +1
Query: 451 QWKHLWNKQESSR*CTSYWQNMC 519
QW W +SS C+S+W + C
Sbjct: 1473 QWTEKWYFDQSSGDCSSFWWDEC 1495
>AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform a protein.
Length = 2007
Score = 27.1 bits (57), Expect = 8.4
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +1
Query: 451 QWKHLWNKQESSR*CTSYWQNMC 519
QW W +SS C+S+W + C
Sbjct: 1474 QWTEKWYFDQSSGDCSSFWWDEC 1496
>AC024843-12|AAF60833.3| 986|Caenorhabditis elegans Hypothetical
protein Y61A9LA.10 protein.
Length = 986
Score = 27.1 bits (57), Expect = 8.4
Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +2
Query: 221 VQKGPRPLVLCGPSGSGKSTLLKRLLKEF-PDKFG 322
++ P + + GPS GK+TLL+ L+K + D FG
Sbjct: 6 IETPPIIVAIVGPSKVGKTTLLRGLVKYYLRDGFG 40
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,195,429
Number of Sequences: 27780
Number of extensions: 212020
Number of successful extensions: 769
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 718
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 769
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1049512662
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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