Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12p09r
         (726 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...   125   4e-31
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    85   6e-19
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    50   2e-08
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       25   0.96 

>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score =  125 bits (302), Expect = 4e-31
 Identities = 67/177 (37%), Positives = 98/177 (55%)
 Frame = -2

Query: 722 VQDKLVEEIKENKERXNGKFDYNSIQNMVYLDMVVSELLRLWPPGVSMDRICVQDYNLGK 543
           VQ KL EEI     + N +  Y+ I+ M YLD V  E LR++PP   + R  + DY    
Sbjct: 326 VQKKLREEINTFCPKNNKELKYDDIKEMEYLDKVFKETLRMYPPASILMRKAISDYTF-- 383

Query: 542 PNDKAKRDFILRKGTGVAIPVWAFHRNPEFFPDPLKFDPERFSEENKHNIKPFAYLPFGV 363
            ND       + K   + IP +A HR+   +P+P  FDPERF ++   +  P  YLPFG 
Sbjct: 384 -NDTK---ITIPKEMKIWIPAFAIHRDSAIYPNPDSFDPERFDQDAMASRHPMHYLPFGD 439

Query: 362 GPRNCIGSRFALCEVKVMAYQLLQHMEISPCEKTCIPSKLSKETFNLRLEGGHWVRL 192
           GPRNCIG+RFA+ + KV    +L++ ++  CEKT IP +     F L  + G ++++
Sbjct: 440 GPRNCIGARFAVYQTKVGLITILRNHKVEVCEKTIIPYEFDPGAFLLSPKDGIYLKI 496


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 85.0 bits (201), Expect = 6e-19
 Identities = 42/148 (28%), Positives = 77/148 (52%)
 Frame = -2

Query: 722 VQDKLVEEIKENKERXNGKFDYNSIQNMVYLDMVVSELLRLWPPGVSMDRICVQDYNLGK 543
           +Q+K+++E+ E     +    +     M YL+  + E LR++PP   + R    D  L  
Sbjct: 370 IQEKVIQELDEIFGDSDRPATFQDTLEMKYLERCLLETLRMYPPVPLIAREIKTDLKL-- 427

Query: 542 PNDKAKRDFILRKGTGVAIPVWAFHRNPEFFPDPLKFDPERFSEENKHNIKPFAYLPFGV 363
               A  D+ +  G  V I  +  HR P  +P+P  FDP+ F  E   N   +A++PF  
Sbjct: 428 ----ASGDYTIPAGCTVVIGTFKLHRQPHIYPNPDVFDPDNFLPEKTANRHYYAFVPFSA 483

Query: 362 GPRNCIGSRFALCEVKVMAYQLLQHMEI 279
           GPR+C+G ++A+ ++K++   +L++  +
Sbjct: 484 GPRSCVGRKYAMLKLKIVLSTILRNFRV 511


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 50.0 bits (114), Expect = 2e-08
 Identities = 41/148 (27%), Positives = 64/148 (43%)
 Frame = -2

Query: 722 VQDKLVEEIKENKERXNGKFDYNSIQNMVYLDMVVSELLRLWPPGVSMDRICVQDYNLGK 543
           VQ+KL EE              ++++   YL   ++E LRL P    + RI  +   L  
Sbjct: 352 VQNKLYEETYALAPA-GCDLTIDNLRKAKYLRACITESLRLIPTTTCIARILDEPIELS- 409

Query: 542 PNDKAKRDFILRKGTGVAIPVWAFHRNPEFFPDPLKFDPERFSEENKHNIKPFAYLPFGV 363
                   + L  GT V +  W    N E F D  K+ PER++     +  P    PFG 
Sbjct: 410 -------GYRLTAGTVVLLHTWIAGLNEENFKDAKKYLPERWTTPTTPH-SPLLVAPFGA 461

Query: 362 GPRNCIGSRFALCEVKVMAYQLLQHMEI 279
           G R C G RF    ++++  ++++  EI
Sbjct: 462 GRRICPGKRFVDLALQLILAKIIREFEI 489


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 24.6 bits (51), Expect = 0.96
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -3

Query: 655 TPYRIWCIWIWLFQNS 608
           TPY +  +W W+ +NS
Sbjct: 274 TPYYVMSLWYWIDRNS 289


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,277
Number of Sequences: 438
Number of extensions: 4716
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22535775
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)