BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12p07f
(440 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X87411-1|CAA60858.1| 599|Anopheles gambiae maltase-like protein... 24 2.8
AY994092-1|AAX86005.1| 57|Anopheles gambiae hyp3.5 precursor p... 23 4.8
>X87411-1|CAA60858.1| 599|Anopheles gambiae maltase-like protein
Agm2 protein.
Length = 599
Score = 23.8 bits (49), Expect = 2.8
Identities = 9/23 (39%), Positives = 15/23 (65%), Gaps = 2/23 (8%)
Frame = -2
Query: 298 KFWI-HAKGGF-VPGLPWLFDTI 236
+FW+ GF + +PWLF+T+
Sbjct: 206 RFWLDQGVDGFRIDAVPWLFETV 228
>AY994092-1|AAX86005.1| 57|Anopheles gambiae hyp3.5 precursor
protein.
Length = 57
Score = 23.0 bits (47), Expect = 4.8
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -3
Query: 306 FLKNFGSMPRVDSCLVFLGF 247
FLK GS PR C++ +GF
Sbjct: 2 FLK--GSFPRFQMCVMLIGF 19
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 381,503
Number of Sequences: 2352
Number of extensions: 6220
Number of successful extensions: 13
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 36993357
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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