Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12p06r
         (739 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M19017-1|AAA28425.1| 1134|Drosophila melanogaster protein ( D.me...    29   5.0  
AE014297-4717|AAF57127.1| 1315|Drosophila melanogaster CG1744-PA...    29   5.0  

>M19017-1|AAA28425.1| 1134|Drosophila melanogaster protein (
           D.melanogaster chaoptingene, exon 10. ).
          Length = 1134

 Score = 29.5 bits (63), Expect = 5.0
 Identities = 25/61 (40%), Positives = 32/61 (52%), Gaps = 6/61 (9%)
 Frame = +2

Query: 32  SLKLVQIVHDV-QELSGY*TYIIKRTNKYYLHDLHT--NILNVI---FFKYVFDTTQSNS 193
           SL+ + I H+V   LSG  TY IK + K  L +LH   N + V+    FKY FDT     
Sbjct: 250 SLRTLDISHNVIWSLSGNETYEIKASTKLNLDNLHLEYNHIEVLPPNSFKY-FDTVNRTF 308

Query: 194 F 196
           F
Sbjct: 309 F 309


>AE014297-4717|AAF57127.1| 1315|Drosophila melanogaster CG1744-PA
           protein.
          Length = 1315

 Score = 29.5 bits (63), Expect = 5.0
 Identities = 25/61 (40%), Positives = 32/61 (52%), Gaps = 6/61 (9%)
 Frame = +2

Query: 32  SLKLVQIVHDV-QELSGY*TYIIKRTNKYYLHDLHT--NILNVI---FFKYVFDTTQSNS 193
           SL+ + I H+V   LSG  TY IK + K  L +LH   N + V+    FKY FDT     
Sbjct: 250 SLRTLDISHNVIWSLSGNETYEIKASTKLNLDNLHLEYNHIEVLPPNSFKY-FDTVNRTF 308

Query: 194 F 196
           F
Sbjct: 309 F 309


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,254,196
Number of Sequences: 53049
Number of extensions: 674682
Number of successful extensions: 1399
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1327
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1397
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3334818762
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)