Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12p06f
(622 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A0RP91 Cluster: TonB, putative; n=1; Campylobacter fetu... 36 1.0
UniRef50_Q24DB5 Cluster: Putative uncharacterized protein; n=4; ... 36 1.0
UniRef50_Q244Z8 Cluster: Putative uncharacterized protein; n=1; ... 36 1.0
UniRef50_A2E1B3 Cluster: Putative uncharacterized protein; n=1; ... 34 2.4
UniRef50_Q8I307 Cluster: Putative uncharacterized protein PFI071... 34 3.1
UniRef50_Q4XVW5 Cluster: Putative uncharacterized protein; n=1; ... 34 3.1
UniRef50_A5DEW0 Cluster: Putative uncharacterized protein; n=1; ... 34 3.1
UniRef50_UPI00015B4AFF Cluster: PREDICTED: similar to Ase; n=1; ... 33 4.2
UniRef50_UPI00006CBAB9 Cluster: hypothetical protein TTHERM_0050... 33 4.2
UniRef50_UPI0000498B79 Cluster: hypothetical protein 4.t00085; n... 33 4.2
UniRef50_Q22DU7 Cluster: Putative uncharacterized protein; n=3; ... 33 4.2
UniRef50_A2EGP8 Cluster: Putative uncharacterized protein; n=1; ... 33 4.2
UniRef50_UPI00006D00EC Cluster: hypothetical protein TTHERM_0082... 33 5.5
UniRef50_Q932N5 Cluster: Putative uncharacterized protein SAVP01... 33 5.5
UniRef50_Q8RI96 Cluster: ATPase; n=7; Bacteria|Rep: ATPase - Fus... 33 5.5
UniRef50_Q4A752 Cluster: Putative uncharacterized protein; n=5; ... 33 5.5
UniRef50_P74680 Cluster: Sll0448 protein; n=1; Synechocystis sp.... 33 5.5
UniRef50_A0D0E9 Cluster: Chromosome undetermined scaffold_33, wh... 33 5.5
UniRef50_Q02697 Cluster: GIY ND1 i1 grp IC protein; n=1; Podospo... 33 5.5
UniRef50_UPI000049A0DC Cluster: hypothetical protein 13.t00062; ... 33 7.3
UniRef50_Q6YPV8 Cluster: DNA polymerase III, gamma/tau subunit; ... 33 7.3
UniRef50_Q23DY9 Cluster: Cation channel family protein; n=2; Alv... 33 7.3
UniRef50_A2EWN0 Cluster: Putative uncharacterized protein; n=1; ... 33 7.3
UniRef50_UPI0000D577C3 Cluster: PREDICTED: similar to CG8874-PB,... 32 9.6
UniRef50_UPI00006CA6AB Cluster: cation channel family protein; n... 32 9.6
UniRef50_UPI000049A29E Cluster: Viral A-type inclusion protein r... 32 9.6
UniRef50_Q7SYI7 Cluster: Zgc:66479; n=2; Danio rerio|Rep: Zgc:66... 32 9.6
UniRef50_Q88YT6 Cluster: Prophage Lp1 protein 35; n=1; Lactobaci... 32 9.6
UniRef50_Q8L394 Cluster: CylI; n=2; Enterococcus faecalis|Rep: C... 32 9.6
UniRef50_Q7RNW8 Cluster: Acetyl-CoA carboxylase 1-related; n=11;... 32 9.6
UniRef50_Q22XJ8 Cluster: Putative uncharacterized protein; n=1; ... 32 9.6
UniRef50_A7S5V5 Cluster: Predicted protein; n=2; Nematostella ve... 32 9.6
UniRef50_A0DYG7 Cluster: Chromosome undetermined scaffold_7, who... 32 9.6
>UniRef50_A0RP91 Cluster: TonB, putative; n=1; Campylobacter fetus
subsp. fetus 82-40|Rep: TonB, putative - Campylobacter
fetus subsp. fetus (strain 82-40)
Length = 249
Score = 35.5 bits (78), Expect = 1.0
Identities = 29/136 (21%), Positives = 63/136 (46%), Gaps = 5/136 (3%)
Frame = +2
Query: 110 FIMSIKSAYLLIFQIIVIYNCSCD-VSLERRQKLLHGFINYYNDLPNQVYKTEVGVLQNF 286
FI + A L+ I++ S D + E+ KL +N D+P + +++
Sbjct: 8 FISLLLHAGLIFGFILLNAKDSADQIQNEQLLKLTFSNLNSLEDIPKPYEEVSEPIIEEK 67
Query: 287 EEIDETSSKIVVNLQVADIHNHESIKYLRCSSTVQDSQEQGVVVLNEIHCQELP--DQQG 460
+E+D+ K ++ ++ I+ + IK+ + + + ++ +V I +++P D
Sbjct: 68 KEVDQAPQKKIIEKKIEQIYTKKIIKHTKPDKKQEQTPKKQIV--QNIETKQMPGIDPNL 125
Query: 461 VSVQQETTE--ITEQN 502
S+ Q + E I +QN
Sbjct: 126 KSITQNSIEQKIFDQN 141
>UniRef50_Q24DB5 Cluster: Putative uncharacterized protein; n=4;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 1675
Score = 35.5 bits (78), Expect = 1.0
Identities = 22/94 (23%), Positives = 41/94 (43%)
Frame = +2
Query: 272 VLQNFEEIDETSSKIVVNLQVADIHNHESIKYLRCSSTVQDSQEQGVVVLNEIHCQELPD 451
+L+ +E E +++ + + K+L+ S + + + N I Q +
Sbjct: 865 ILKYLKEYQEFYTQVFTKNTLETLQTELEYKFLKMDSLEKSNFNFQLNQQNTIQSQFNQN 924
Query: 452 QQGVSVQQETTEITEQNPIHFDNENEFNTVSPTE 553
QQ E + +E FDN NE NT++PT+
Sbjct: 925 QQNCQKCLEENKFSENKSQDFDNSNENNTLTPTK 958
>UniRef50_Q244Z8 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 1496
Score = 35.5 bits (78), Expect = 1.0
Identities = 26/107 (24%), Positives = 49/107 (45%)
Frame = +2
Query: 278 QNFEEIDETSSKIVVNLQVADIHNHESIKYLRCSSTVQDSQEQGVVVLNEIHCQELPDQQ 457
QN + + N A + + KY+ ST+Q S++QG + + Q+L QQ
Sbjct: 356 QNQSSVRNVLQQQQSNSSDAKFNLQQKTKYIDLQSTIQ-SKKQGSQL--QYQHQQLTQQQ 412
Query: 458 GVSVQQETTEITEQNPIHFDNENEFNTVSPTEQLIAAPRKDGFSPCI 598
+QQ + + + N ++N FN +S L++ ++GF +
Sbjct: 413 --QIQQIQSYLNQSNKTDQSSQNPFNNMSNNSILLSKSSQNGFGSIV 457
>UniRef50_A2E1B3 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 485
Score = 34.3 bits (75), Expect = 2.4
Identities = 16/63 (25%), Positives = 34/63 (53%)
Frame = +2
Query: 179 DVSLERRQKLLHGFINYYNDLPNQVYKTEVGVLQNFEEIDETSSKIVVNLQVADIHNHES 358
D S++ + KL+ F + + L N + +++ + + E + E K+ NLQ+ + + +
Sbjct: 39 DTSVDYQMKLIQHFQDSLDILNNAIKESDELLAKQIERVKEIQKKVPNNLQITNANRDDV 98
Query: 359 IKY 367
IKY
Sbjct: 99 IKY 101
>UniRef50_Q8I307 Cluster: Putative uncharacterized protein PFI0710c;
n=1; Plasmodium falciparum 3D7|Rep: Putative
uncharacterized protein PFI0710c - Plasmodium falciparum
(isolate 3D7)
Length = 1728
Score = 33.9 bits (74), Expect = 3.1
Identities = 29/120 (24%), Positives = 47/120 (39%), Gaps = 2/120 (1%)
Frame = +2
Query: 218 FINYYNDLPNQVYKTEVGVLQNFEEIDETSSKIVVNLQV-ADIHNHESIKYLRCSSTVQD 394
+I ND+P T N ID KI +N + +I E I + + D
Sbjct: 1208 YITQNNDIPTNTTTTTNNNNNNNNNIDNMKMKIRMNNCLHQNITKQEHITKDTIHNNLSD 1267
Query: 395 SQEQGVVVLNEIHCQELPDQQGVSVQQETTE-ITEQNPIHFDNENEFNTVSPTEQLIAAP 571
Q+ + N + +P +V + E ITE+ I F+N N N + ++ P
Sbjct: 1268 VQKNNQIKENNDNIINVPYNNNSNVDEGYNEDITEKKYITFENHNLDNNSNDNKEFCVVP 1327
>UniRef50_Q4XVW5 Cluster: Putative uncharacterized protein; n=1;
Plasmodium chabaudi|Rep: Putative uncharacterized
protein - Plasmodium chabaudi
Length = 92
Score = 33.9 bits (74), Expect = 3.1
Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Frame = -1
Query: 334 NLQVDYYFTRGLIDFFKILQNAY-FGFINLIR*IIVVIYKAM*QFLPSFKAYIARAIINY 158
N Q Y+ L +F+ NA+ + +I I I+V+IY + F PS+ YI II +
Sbjct: 2 NFQFYNYYKNILFNFWG---NAHIYIYIKRINTILVLIYFFL-MFFPSWLIYIYIYIILF 57
Query: 157 NYLKNQQI 134
NY+KN ++
Sbjct: 58 NYIKNNKL 65
>UniRef50_A5DEW0 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 492
Score = 33.9 bits (74), Expect = 3.1
Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 3/107 (2%)
Frame = +2
Query: 308 SKIVVNLQVADIHNHESIKYLRCSSTVQDSQEQGVVVLNEIHCQELPDQQGVSVQQETTE 487
S +V+ L + + NHE++ L+ V+ E+ NE E +++ S Q+
Sbjct: 178 SSLVIRLSYSRVDNHETV--LKQKEIVKKQLEEQQK-WNERRELERVERERQSAQERELS 234
Query: 488 ITEQNPIHFDNENEFNTVS---PTEQLIAAPRKDGFSPCIGCSTRVD 619
T Q P+ N NE T+S P + + P + S S+RVD
Sbjct: 235 ETRQEPVDEANSNENETISKQAPLNRFVDQPPQPSIS---SVSSRVD 278
>UniRef50_UPI00015B4AFF Cluster: PREDICTED: similar to Ase; n=1;
Nasonia vitripennis|Rep: PREDICTED: similar to Ase -
Nasonia vitripennis
Length = 489
Score = 33.5 bits (73), Expect = 4.2
Identities = 21/58 (36%), Positives = 29/58 (50%)
Frame = +2
Query: 383 TVQDSQEQGVVVLNEIHCQELPDQQGVSVQQETTEITEQNPIHFDNENEFNTVSPTEQ 556
T+QD+ E+ ++ N Q L + VSV T + +Q H NENE T PT Q
Sbjct: 29 TLQDN-ERNIIGNNNRAPQALAPKNNVSVINVNTSVNQQIQQHQQNENEQATRRPTNQ 85
>UniRef50_UPI00006CBAB9 Cluster: hypothetical protein TTHERM_00502550;
n=1; Tetrahymena thermophila SB210|Rep: hypothetical
protein TTHERM_00502550 - Tetrahymena thermophila SB210
Length = 2443
Score = 33.5 bits (73), Expect = 4.2
Identities = 30/122 (24%), Positives = 55/122 (45%), Gaps = 13/122 (10%)
Frame = +2
Query: 176 CDVSLERRQKLLHGFINYY-NDLPNQVYKTEVGVL-QNFEEIDETS----------SKIV 319
C + + L + ++Y+ N+ PN + K +V ++ Q+ E+ E+S SKI
Sbjct: 1434 CSLQQNNKNNLNYLPLSYFSNNHPNSLIKEKVNLIYQSNTELKESSRFSRSLDTNVSKIT 1493
Query: 320 VNLQVADIHNHESIKYLRCSSTVQDSQEQGVVVLNEIHCQELPDQQ-GVSVQQETTEITE 496
Q N +K ++ + +Q+QG+ N +LP QQ V Q+ ++
Sbjct: 1494 NQQQNNQQQNESFLKKIQLYRSRSQNQQQGIFTNNIQSQNQLPQQQSNVQSYQQNIQLNN 1553
Query: 497 QN 502
QN
Sbjct: 1554 QN 1555
>UniRef50_UPI0000498B79 Cluster: hypothetical protein 4.t00085; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 4.t00085 - Entamoeba histolytica HM-1:IMSS
Length = 894
Score = 33.5 bits (73), Expect = 4.2
Identities = 21/99 (21%), Positives = 43/99 (43%)
Frame = +2
Query: 233 NDLPNQVYKTEVGVLQNFEEIDETSSKIVVNLQVADIHNHESIKYLRCSSTVQDSQEQGV 412
NDL Y E + E+ ++ K ++N + ++ + + + + ST+ ++Q
Sbjct: 654 NDLETDTYNKEEIKETDKEKEQKSEEKEIINKENIELEDLKLVNKKKKKSTINKKEQQSD 713
Query: 413 VVLNEIHCQELPDQQGVSVQQETTEITEQNPIHFDNENE 529
E + +LP G + E E+ +Q P+ NE
Sbjct: 714 FQKTEDNSFDLPSSIGGIEKVEPEEMKDQPPLESSTINE 752
>UniRef50_Q22DU7 Cluster: Putative uncharacterized protein; n=3;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 634
Score = 33.5 bits (73), Expect = 4.2
Identities = 35/146 (23%), Positives = 61/146 (41%), Gaps = 2/146 (1%)
Frame = +2
Query: 113 IMSIKSAYLLIFQIIVIYNCSCDVSLERRQKLLHGFINYYNDLPNQVYKTEVGVLQNFEE 292
I++ + Y +I Q + +YN + + + KLL F+N +Q + T +F +
Sbjct: 9 ILTFLALYFIIRQCVWLYNSQIKMPFKEQMKLLSSFLNENRYKESQPFST---FPFHFRQ 65
Query: 293 IDETSSKIVVNLQVADIHNHESIKYLRCSSTVQDSQ--EQGVVVLNEIHCQELPDQQGVS 466
S V+ L V D N LR + D+ V+LN + C L +
Sbjct: 66 DKGLYSSYVI-LNVMDKRNSFIGHLLRTKVEIDDNNYFVTNNVLLNLLDCVNLGTYE--- 121
Query: 467 VQQETTEITEQNPIHFDNENEFNTVS 544
+ Q+ E T + F+++N N S
Sbjct: 122 INQDELEETLDTLLEFNDKNLKNVPS 147
>UniRef50_A2EGP8 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 779
Score = 33.5 bits (73), Expect = 4.2
Identities = 25/106 (23%), Positives = 50/106 (47%), Gaps = 2/106 (1%)
Frame = +2
Query: 224 NYYNDLPNQVYKTEVGVLQNFEEIDETSSKIVVNLQVADIHNHESIKYLRCSSTVQDSQE 403
N N+ + ++ + E+I++ N+Q + ++ + I+ ++ Q ++
Sbjct: 594 NTNNEQDEENETEQIQQQETTEQINDAEEN--ANIQGQENNDQQEIEIIQIEDEEQKQED 651
Query: 404 QGVVVLNEIHCQELP-DQQGVSVQQETTEI-TEQNPIHFDNENEFN 535
+ + NEIH +E Q+ + QE EI E+N IH ENE +
Sbjct: 652 EEIPQENEIHQEENEIHQEENEIHQEENEIHQEENEIH-QEENEIH 696
>UniRef50_UPI00006D00EC Cluster: hypothetical protein TTHERM_00823790;
n=1; Tetrahymena thermophila SB210|Rep: hypothetical
protein TTHERM_00823790 - Tetrahymena thermophila SB210
Length = 2822
Score = 33.1 bits (72), Expect = 5.5
Identities = 19/64 (29%), Positives = 31/64 (48%)
Frame = +2
Query: 389 QDSQEQGVVVLNEIHCQELPDQQGVSVQQETTEITEQNPIHFDNENEFNTVSPTEQLIAA 568
QD Q+Q ++ Q+L + + + + + QN ++ N+NE N V EQL A
Sbjct: 1233 QDQQQQNQQIIEANQQQQLLNVKSEQINLQEENLAIQN--NYQNQNEINEVLNQEQLDKA 1290
Query: 569 PRKD 580
KD
Sbjct: 1291 ENKD 1294
>UniRef50_Q932N5 Cluster: Putative uncharacterized protein SAVP010;
n=1; Staphylococcus aureus subsp. aureus Mu50|Rep:
Putative uncharacterized protein SAVP010 -
Staphylococcus aureus (strain Mu50 / ATCC 700699)
Length = 303
Score = 33.1 bits (72), Expect = 5.5
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = -1
Query: 253 NLIR*IIVVIYKAM*QFLPSFKAYIARAIINYNYLKNQQICTLYRHYEFTQPFRYI-NST 77
N+I +I+ K+M Q P K+++++ + Y Y I + Y+FT PF + N T
Sbjct: 155 NIIMNVIIDFNKSMIQSFPEMKSFLSKETVTYYYFSTNGI---WETYDFT-PFLFDGNKT 210
Query: 76 LII 68
L++
Sbjct: 211 LLV 213
>UniRef50_Q8RI96 Cluster: ATPase; n=7; Bacteria|Rep: ATPase -
Fusobacterium nucleatum subsp. nucleatum
Length = 430
Score = 33.1 bits (72), Expect = 5.5
Identities = 19/67 (28%), Positives = 37/67 (55%)
Frame = +2
Query: 230 YNDLPNQVYKTEVGVLQNFEEIDETSSKIVVNLQVADIHNHESIKYLRCSSTVQDSQEQG 409
YNDL + Y +VGV++ + + D+ K + L+V + N +I+Y S+ +S+E+
Sbjct: 323 YNDLIRRGYNVDVGVVE-YNQTDDNKKK-RIQLEVDFVVNRGNIRYYIQSALALNSEEKK 380
Query: 410 VVVLNEI 430
+N +
Sbjct: 381 EQEINSL 387
>UniRef50_Q4A752 Cluster: Putative uncharacterized protein; n=5;
Mycoplasma hyopneumoniae|Rep: Putative uncharacterized
protein - Mycoplasma hyopneumoniae (strain 7448)
Length = 867
Score = 33.1 bits (72), Expect = 5.5
Identities = 28/112 (25%), Positives = 52/112 (46%), Gaps = 8/112 (7%)
Frame = +2
Query: 233 NDLPNQVYKTEVGVLQNFEEIDETSSKIVVNLQVADIHNHESIKYLRCSSTVQDSQEQGV 412
N N+V +E+ NF + D+ S ++L+ AD+ + S++ L +Q+ Q
Sbjct: 326 NSQENKVDLSELPA--NFNDKDQAESH-QISLENADLTSTNSVEKLEIEEKIQEKQSNIR 382
Query: 413 VVLNEIHCQELPDQQGVSVQQETT--EITEQNPIHFDN------ENEFNTVS 544
++ N + P+Q V + E T + E+N + N E +FN +S
Sbjct: 383 IISNNLEQNCCPEQNVVEKEIEKTYEDNIEKNNSFYSNFYQDQFERDFNKIS 434
>UniRef50_P74680 Cluster: Sll0448 protein; n=1; Synechocystis sp.
PCC 6803|Rep: Sll0448 protein - Synechocystis sp.
(strain PCC 6803)
Length = 401
Score = 33.1 bits (72), Expect = 5.5
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +2
Query: 395 SQEQGVVVLNEIHCQELPDQQ-GVSVQQETTEITEQNPIHFDNENEFNTVSPTEQLI 562
++EQ + L E+ E Q G+S++ T + N FD++++F + PTE +I
Sbjct: 256 NEEQAIDALVEVENTEKSTQSFGLSLEYCITNFNQGNKNFFDDQSQFQYLKPTESVI 312
>UniRef50_A0D0E9 Cluster: Chromosome undetermined scaffold_33, whole
genome shotgun sequence; n=2; Paramecium tetraurelia|Rep:
Chromosome undetermined scaffold_33, whole genome shotgun
sequence - Paramecium tetraurelia
Length = 954
Score = 33.1 bits (72), Expect = 5.5
Identities = 26/98 (26%), Positives = 51/98 (52%), Gaps = 6/98 (6%)
Frame = +2
Query: 281 NFEEIDETSSKIVVNLQVADIHNHESIK---YLRCSSTVQDSQEQGVVVLNEIHCQELPD 451
N +E + S ++VV + +I N+ + + YL VQ +EQ +++ HCQ+
Sbjct: 860 NEQEQIQQSQEVVVEMSEEEIQNYINNQKQIYLDIQQKVQQLEEQ----VSD-HCQKEQY 914
Query: 452 QQGVSVQQETTEITEQ-NPIHFDNENEFNT--VSPTEQ 556
++ +QQE +T+Q N I + + ++N + P +Q
Sbjct: 915 EEADQIQQEVDTLTQQANGIQIELKQKYNVDILQPEDQ 952
>UniRef50_Q02697 Cluster: GIY ND1 i1 grp IC protein; n=1; Podospora
anserina|Rep: GIY ND1 i1 grp IC protein - Podospora
anserina
Length = 473
Score = 33.1 bits (72), Expect = 5.5
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = +2
Query: 146 FQIIVIYNCSCDVSLERRQKLLHGFINYYNDLPNQVYKTEVGVLQNFEEIDE 301
F +I CS D+ ER ++ Y L N +YK+E+ +QN++ + E
Sbjct: 114 FHFSIIQICSLDIQKERENY----YLQKYLPLLNTIYKSEMYTIQNYDSLHE 161
>UniRef50_UPI000049A0DC Cluster: hypothetical protein 13.t00062;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 13.t00062 - Entamoeba histolytica HM-1:IMSS
Length = 1679
Score = 32.7 bits (71), Expect = 7.3
Identities = 21/100 (21%), Positives = 47/100 (47%), Gaps = 5/100 (5%)
Frame = +2
Query: 212 HGFINYYNDLPNQVYKTEVGVLQNFEEIDETSSKIVVNLQVADIHNHES-----IKYLRC 376
H FI + N+V E+ +++ + T+ +VV ++D+ + + LR
Sbjct: 336 HSFIKPLKSMKNRVVSKEIKIIE-YTICTPTNILVVVTRSLSDVFSTYGGISVFLPLLRS 394
Query: 377 SSTVQDSQEQGVVVLNEIHCQELPDQQGVSVQQETTEITE 496
S + + G ++ +HC+ + Q +++ ETT+I +
Sbjct: 395 GSNTKVTTNIGKILQLFLHCKVIDKQVAITLIVETTKIAQ 434
>UniRef50_Q6YPV8 Cluster: DNA polymerase III, gamma/tau subunit;
n=3; Candidatus Phytoplasma asteris|Rep: DNA polymerase
III, gamma/tau subunit - Onion yellows phytoplasma
Length = 482
Score = 32.7 bits (71), Expect = 7.3
Identities = 32/149 (21%), Positives = 58/149 (38%), Gaps = 4/149 (2%)
Frame = +2
Query: 137 LLIFQIIVIYNCSCDVSLERRQKLLHGFINYYNDLPNQVYKTEVGVLQNFEEIDETSSKI 316
+ QI +++ +L+ Q+ + N YN+ + E +N+E T
Sbjct: 334 IAFLQICSLHSFQFQANLQETQQFVTNKTNIYNNEQASLALDETNAKENYEPTKITQK-- 391
Query: 317 VVNLQVADIHNHESIKYLRCSSTVQDSQEQGVVVLNEIHCQELPDQQGVSVQ----QETT 484
N + E IK + +S + + Q+L Q S + T+
Sbjct: 392 --NTEKKTFDKTEKIKPTKLASIANEKPPKPPKTEYLHPVQDLQSQNNFSQKTPNNSTTS 449
Query: 485 EITEQNPIHFDNENEFNTVSPTEQLIAAP 571
E+T+QN + N E T SPT++ + P
Sbjct: 450 ELTQQNNLPSQNSQE--TKSPTKKTLIFP 476
>UniRef50_Q23DY9 Cluster: Cation channel family protein; n=2;
Alveolata|Rep: Cation channel family protein -
Tetrahymena thermophila SB210
Length = 3198
Score = 32.7 bits (71), Expect = 7.3
Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 3/125 (2%)
Frame = +2
Query: 191 ERRQKLLHGFIN-YYNDLPN--QVYKTEVGVLQNFEEIDETSSKIVVNLQVADIHNHESI 361
++++++ GF N Y + PN ++YK E+ QN E +E ++ LQ+ I N+E
Sbjct: 2845 DQKEQIADGFFNGKYFEFPNPDEIYKAELENEQNINEFEERINEQQKQLQI--IKNNEQN 2902
Query: 362 KYLRCSSTVQDSQEQGVVVLNEIHCQELPDQQGVSVQQETTEITEQNPIHFDNENEFNTV 541
SS + QE+ I +L +Q+ +++ DN N +
Sbjct: 2903 NKQMLSSVNSNYQER----TKSIQRSQLNNQRNNTLKLSHAFNIPSKRTSIDNVQSNNQL 2958
Query: 542 SPTEQ 556
P +Q
Sbjct: 2959 VPKDQ 2963
>UniRef50_A2EWN0 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 371
Score = 32.7 bits (71), Expect = 7.3
Identities = 14/49 (28%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +2
Query: 374 CSSTVQDS-QEQGVVVLNEIHCQELPDQQGVSVQQETTEITEQNPIHFD 517
CS+ ++D QEQ + +N I Q +P++ + + ++ +I P +FD
Sbjct: 223 CSNDIEDDCQEQKTIDINSIEPQPIPEKTPETTELQSLQIEPNQPSNFD 271
>UniRef50_UPI0000D577C3 Cluster: PREDICTED: similar to CG8874-PB,
isoform B; n=3; Endopterygota|Rep: PREDICTED: similar to
CG8874-PB, isoform B - Tribolium castaneum
Length = 801
Score = 32.3 bits (70), Expect = 9.6
Identities = 27/108 (25%), Positives = 49/108 (45%), Gaps = 8/108 (7%)
Frame = +2
Query: 284 FEEIDETSSKIVVNLQVADIHNHESIKYLRCSSTVQDSQEQGVV-VLNEIHCQELPDQQG 460
F +I + S L + + + L+C Q + + LNE+ C+E+P
Sbjct: 347 FTQIPQQSLNAFCRLASVAETSKKELNELKCQERKMLKQTELIKSALNELGCEEVPSGCD 406
Query: 461 VSVQQETTEIT---EQNPIHFD----NENEFNTVSPTEQLIAAPRKDG 583
+S+ +TT IT EQ + + +E F+ V P E+++ +DG
Sbjct: 407 LSIDNQTTFITNSAEQVSMTTNKSLVDEEWFHGVLPREEVVRLLTQDG 454
>UniRef50_UPI00006CA6AB Cluster: cation channel family protein; n=1;
Tetrahymena thermophila SB210|Rep: cation channel family
protein - Tetrahymena thermophila SB210
Length = 1411
Score = 32.3 bits (70), Expect = 9.6
Identities = 29/134 (21%), Positives = 59/134 (44%)
Frame = +2
Query: 134 YLLIFQIIVIYNCSCDVSLERRQKLLHGFINYYNDLPNQVYKTEVGVLQNFEEIDETSSK 313
+L++ Q V C +LE + L+ G+I +N+ N++ + QN + I +
Sbjct: 735 HLVVNQQYVFQKYDC-FNLENNE-LIDGYIEQFNEY-NELIDEVSELSQNIQRIQSNEAI 791
Query: 314 IVVNLQVADIHNHESIKYLRCSSTVQDSQEQGVVVLNEIHCQELPDQQGVSVQQETTEIT 493
+VN+Q ++ E + CS V+ + + + H + +Q +Q + T
Sbjct: 792 QLVNIQNQQVNEKEQKNNIYCSPDVRPAS----LSIGPAHMGSIEEQLKNFTKQFSQTFT 847
Query: 494 EQNPIHFDNENEFN 535
+Q F+N+ N
Sbjct: 848 KQQ--SFNNQGNRN 859
>UniRef50_UPI000049A29E Cluster: Viral A-type inclusion protein
repeat; n=2; Entamoeba histolytica HM-1:IMSS|Rep: Viral
A-type inclusion protein repeat - Entamoeba histolytica
HM-1:IMSS
Length = 1813
Score = 32.3 bits (70), Expect = 9.6
Identities = 21/66 (31%), Positives = 38/66 (57%), Gaps = 4/66 (6%)
Frame = +2
Query: 377 SSTVQDSQEQGVVV--LNEI--HCQELPDQQGVSVQQETTEITEQNPIHFDNENEFNTVS 544
+ T+Q ++E+ V++ LN+I Q++ D++ V Q++ EIT+ N ENE N +
Sbjct: 675 NETIQLNEEKSVLLNELNQIKEEKQKIEDEKAVIQQEKENEITKLNEDKTVIENELNQIK 734
Query: 545 PTEQLI 562
+Q I
Sbjct: 735 TEKQEI 740
>UniRef50_Q7SYI7 Cluster: Zgc:66479; n=2; Danio rerio|Rep: Zgc:66479
- Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 612
Score = 32.3 bits (70), Expect = 9.6
Identities = 26/120 (21%), Positives = 48/120 (40%)
Frame = +2
Query: 185 SLERRQKLLHGFINYYNDLPNQVYKTEVGVLQNFEEIDETSSKIVVNLQVADIHNHESIK 364
SLE QK H N ++ L Q+ + +L +E D + Q + H +
Sbjct: 272 SLEDHQKSTH---NLHSHLAAQLEIVQSQMLSESQEFDSEEEIPEEDQQAEQVPTHGEVP 328
Query: 365 YLRCSSTVQDSQEQGVVVLNEIHCQELPDQQGVSVQQETTEITEQNPIHFDNENEFNTVS 544
+ D + V + +E+ ++ ++QE E TEQ +H + + N +S
Sbjct: 329 -------IHDEVKVETVTTEDTLAKEINSEEAEQLEQEVEEPTEQVKVHEEEPTDGNEIS 381
>UniRef50_Q88YT6 Cluster: Prophage Lp1 protein 35; n=1;
Lactobacillus plantarum|Rep: Prophage Lp1 protein 35 -
Lactobacillus plantarum
Length = 260
Score = 32.3 bits (70), Expect = 9.6
Identities = 29/126 (23%), Positives = 53/126 (42%), Gaps = 7/126 (5%)
Frame = +2
Query: 227 YYNDLPNQVYKTEVGVLQNFEEIDETSSKIVVNLQVADIHNHESIKYLRCSSTVQDSQEQ 406
Y +++P + V+ N + D + K++V+ D E KY ++ D +
Sbjct: 116 YRSEVPCSILGLTHIVINNVSKRDMYAVKVLVSTSTDDNFKQEFQKYSSAAALKSDEFYK 175
Query: 407 GVVVLNEIHCQE----LPDQQGVSVQQ---ETTEITEQNPIHFDNENEFNTVSPTEQLIA 565
+ +++I E L D Q TE+ E ++F+NEN P E+ +
Sbjct: 176 SCISIDKIAANEKVGLLFDHYNEIEQVWIWYITEMRESIKLYFENENGGLIYRPDEKRLE 235
Query: 566 APRKDG 583
+KDG
Sbjct: 236 NQQKDG 241
>UniRef50_Q8L394 Cluster: CylI; n=2; Enterococcus faecalis|Rep: CylI
- Enterococcus faecalis (Streptococcus faecalis)
Length = 341
Score = 32.3 bits (70), Expect = 9.6
Identities = 28/121 (23%), Positives = 53/121 (43%), Gaps = 11/121 (9%)
Frame = +2
Query: 101 LCKFIMSIKSAYLLI---FQIIVIYNCSCDVSLERRQKLLHGFINYYNDLPNQ------V 253
+CK I K L + F + VIY D + R+ KL++ ++ + + N
Sbjct: 187 VCKIIKKNKELPLYVLNTFLLYVIYEYLIDKN-NRKLKLIYPILSKEDKILNNKSYLQNF 245
Query: 254 YKTEVGVLQNFEEIDETSSKIVVNLQVADIHNHESIKYL--RCSSTVQDSQEQGVVVLNE 427
Y + +++ +D + +NL++ D + IKYL +CS + D Q + +
Sbjct: 246 YLANLYMIEYILSVDNKQTFKKINLKILDSISRSRIKYLNFKCSKSADDEISQSMTEFSN 305
Query: 428 I 430
I
Sbjct: 306 I 306
>UniRef50_Q7RNW8 Cluster: Acetyl-CoA carboxylase 1-related; n=11;
Plasmodium|Rep: Acetyl-CoA carboxylase 1-related -
Plasmodium yoelii yoelii
Length = 2911
Score = 32.3 bits (70), Expect = 9.6
Identities = 20/80 (25%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Frame = +2
Query: 113 IMSIKSAYLLIFQIIVIYNCSCDVSLERRQKLLHGFINYYNDL--PNQVYKTEVGVLQNF 286
I IK + +I+ I++ N + + + +++ F+N YN+L N V + V +
Sbjct: 2035 IRDIKISSNIIYHIVLPNNSNIEDQINGIKEIYKNFLNKYNELFIENYVNNVYIKVYKEI 2094
Query: 287 EEIDETSSKIVVNLQVADIH 346
EE +K+ +N Q+ +H
Sbjct: 2095 EEEKNNETKLELN-QLLKLH 2113
>UniRef50_Q22XJ8 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 1904
Score = 32.3 bits (70), Expect = 9.6
Identities = 34/124 (27%), Positives = 57/124 (45%), Gaps = 7/124 (5%)
Frame = +2
Query: 179 DVSL-ERRQKLL-HGFINYYNDLPNQVYKTEVGVLQNFEEIDETSSKIVVNLQVADIHNH 352
D+SL E R KLL +G + P+ + K +FE ++ + + IH H
Sbjct: 1736 DMSLTELRPKLLEYGKVETLK--PHIMEKAVDICFSDFESSEKAYFGLQGQYNIEFIHQH 1793
Query: 353 ESIKYLRC----SSTVQDSQEQGVVVLNE-IHCQELPDQQGVSVQQETTEITEQNPIHFD 517
+K+L+ Q+ QE+G L++ I QE +QQG +QQ+ ++ +D
Sbjct: 1794 -IVKFLKNPFQPQDEAQEEQEEGGNQLDQNIEYQE-DEQQGDQIQQDQANENQEQQYQYD 1851
Query: 518 NENE 529
NE
Sbjct: 1852 ENNE 1855
>UniRef50_A7S5V5 Cluster: Predicted protein; n=2; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 408
Score = 32.3 bits (70), Expect = 9.6
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
Frame = +2
Query: 236 DLPNQVYKTEV-GVLQNFEEID-ETSSKIVVNLQVADIHNHESIKYLRCS-STVQDSQEQ 406
D+ + YK V G+ Q ++ +T S + LQ A + + I+ L+ V QE
Sbjct: 168 DIEIEQYKDMVNGLQQRIRGLEMDTDSTTMALLQQAIVEKDDQIQMLKSELEKVGKYQET 227
Query: 407 GVVVLNEIHCQELPDQQGVSVQ 472
V+++ +H Q + QG++ Q
Sbjct: 228 SFVIVDSMHLQASTEMQGIAAQ 249
>UniRef50_A0DYG7 Cluster: Chromosome undetermined scaffold_7, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_7,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 1135
Score = 32.3 bits (70), Expect = 9.6
Identities = 22/109 (20%), Positives = 48/109 (44%), Gaps = 5/109 (4%)
Frame = +2
Query: 227 YYNDLPNQVYKTEVGVLQNFEEIDETSSKIVVNLQVADIHNHESIKYLR-----CSSTVQ 391
YY NQ+ K + + + + K + +LQ+ + I+ L+ +++Q
Sbjct: 579 YYEKQINQLIKQNKDLQHSITQFQQDHLKTIQDLQIKHVSYQTQIQQLQNENQLLRTSLQ 638
Query: 392 DSQEQGVVVLNEIHCQELPDQQGVSVQQETTEITEQNPIHFDNENEFNT 538
+ ++ LN++ Q +++ QE ++ +QN HF + NT
Sbjct: 639 NQEQNSFKQLNQLKEQIQNERKQFQKLQEIQQMEKQNEKHFIEKLHSNT 687
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 583,298,757
Number of Sequences: 1657284
Number of extensions: 11165823
Number of successful extensions: 31248
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 29909
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31216
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 45221970467
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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