Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12p06f
(622 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY118657-1|AAM50026.1| 884|Drosophila melanogaster SD08803p pro... 30 2.2
AJ002729-1|CAA05691.2| 884|Drosophila melanogaster importin bet... 30 2.2
AF222745-1|AAF34680.1| 884|Drosophila melanogaster importin bet... 30 2.2
AE014134-3276|AAF53918.1| 884|Drosophila melanogaster CG2637-PA... 30 2.2
BT022175-1|AAY51569.1| 587|Drosophila melanogaster IP01257p pro... 29 3.8
AY113648-1|AAM29653.1| 1308|Drosophila melanogaster SD12145p pro... 29 3.8
AL121804-6|CAB65858.1| 2160|Drosophila melanogaster EG:BACR7C10.... 29 3.8
AE014298-425|AAF45800.2| 2178|Drosophila melanogaster CG10260-PB... 29 3.8
AE014297-2411|AAF55470.2| 587|Drosophila melanogaster CG17803-P... 29 3.8
AF243382-1|AAF68440.1| 1548|Drosophila melanogaster cytoplasmic ... 29 6.7
>AY118657-1|AAM50026.1| 884|Drosophila melanogaster SD08803p
protein.
Length = 884
Score = 30.3 bits (65), Expect = 2.2
Identities = 14/57 (24%), Positives = 29/57 (50%)
Frame = +2
Query: 227 YYNDLPNQVYKTEVGVLQNFEEIDETSSKIVVNLQVADIHNHESIKYLRCSSTVQDS 397
Y N+L + + G++Q + +D+T+ V++++ +H IK + V DS
Sbjct: 763 YINELRESILEAYTGIIQGLKGVDQTAHTDVMHMEPHLMHIISFIKRIAQEGDVSDS 819
>AJ002729-1|CAA05691.2| 884|Drosophila melanogaster importin beta
protein.
Length = 884
Score = 30.3 bits (65), Expect = 2.2
Identities = 14/57 (24%), Positives = 29/57 (50%)
Frame = +2
Query: 227 YYNDLPNQVYKTEVGVLQNFEEIDETSSKIVVNLQVADIHNHESIKYLRCSSTVQDS 397
Y N+L + + G++Q + +D+T+ V++++ +H IK + V DS
Sbjct: 763 YINELRESILEAYTGIIQGLKGVDQTAHTDVMHMEPHLMHIISFIKRIAQEGDVSDS 819
>AF222745-1|AAF34680.1| 884|Drosophila melanogaster importin beta
protein.
Length = 884
Score = 30.3 bits (65), Expect = 2.2
Identities = 14/57 (24%), Positives = 29/57 (50%)
Frame = +2
Query: 227 YYNDLPNQVYKTEVGVLQNFEEIDETSSKIVVNLQVADIHNHESIKYLRCSSTVQDS 397
Y N+L + + G++Q + +D+T+ V++++ +H IK + V DS
Sbjct: 763 YINELRESILEAYTGIIQGLKGVDQTAHTDVMHMEPHLMHIISFIKRIAQEGDVSDS 819
>AE014134-3276|AAF53918.1| 884|Drosophila melanogaster CG2637-PA
protein.
Length = 884
Score = 30.3 bits (65), Expect = 2.2
Identities = 14/57 (24%), Positives = 29/57 (50%)
Frame = +2
Query: 227 YYNDLPNQVYKTEVGVLQNFEEIDETSSKIVVNLQVADIHNHESIKYLRCSSTVQDS 397
Y N+L + + G++Q + +D+T+ V++++ +H IK + V DS
Sbjct: 763 YINELRESILEAYTGIIQGLKGVDQTAHTDVMHMEPHLMHIISFIKRIAQEGDVSDS 819
>BT022175-1|AAY51569.1| 587|Drosophila melanogaster IP01257p
protein.
Length = 587
Score = 29.5 bits (63), Expect = 3.8
Identities = 30/145 (20%), Positives = 63/145 (43%), Gaps = 4/145 (2%)
Frame = +2
Query: 200 QKLLHGFINYYNDLPNQVYKTEVGVLQNFEEIDETSSKIVVNLQVADIHNHESIKYLRCS 379
++L H + + N+ + Q +++ +T+ K N+Q+ D ++ +
Sbjct: 127 KELPHHICSTCQETVNKSMEFRAKCQQVDKKLRQTTEKY--NIQICDEEMESELENVLYE 184
Query: 380 STVQDSQEQGVVVLNEIHCQELPDQQGVSVQQETTEITEQNPIHFD-NENEFNTVSPTEQ 556
+ Q Q +GVV L + + LPD +GV + + + P F +E+E + TE+
Sbjct: 185 ESAQ--QAKGVVGLEDFSSELLPDSEGVLDEDDFP--LDAEPTQFSLSEDELDLDRDTEK 240
Query: 557 LIAAPRKDGFSPCIG---CSTRVDV 622
A + + I C T+ ++
Sbjct: 241 DFALEQNKSCNEIISIRKCKTKEEI 265
>AY113648-1|AAM29653.1| 1308|Drosophila melanogaster SD12145p protein.
Length = 1308
Score = 29.5 bits (63), Expect = 3.8
Identities = 26/103 (25%), Positives = 45/103 (43%), Gaps = 1/103 (0%)
Frame = +2
Query: 275 LQNFEEIDETSSKIVVNLQVADIHNHESIKYLRCSSTVQDSQEQGVVVLNEIHCQELPDQ 454
++N E IDE S++V + +A H E++KYL + + V +L+ +
Sbjct: 769 IKNAEIIDEEVSRLVCSDPIAVCHIPEALKYLCTTKNLLQESPDLVYILSWSPVTPIQAL 828
Query: 455 QGVSVQQETTEITEQNPIHFDNENEFNTVSP-TEQLIAAPRKD 580
S Q + +T Q + + +V P QL+ A R D
Sbjct: 829 AYFSRQYPSHPLTAQYAVKTLSSYPAESVLPYIPQLVQALRHD 871
>AL121804-6|CAB65858.1| 2160|Drosophila melanogaster EG:BACR7C10.2
protein.
Length = 2160
Score = 29.5 bits (63), Expect = 3.8
Identities = 26/103 (25%), Positives = 45/103 (43%), Gaps = 1/103 (0%)
Frame = +2
Query: 275 LQNFEEIDETSSKIVVNLQVADIHNHESIKYLRCSSTVQDSQEQGVVVLNEIHCQELPDQ 454
++N E IDE S++V + +A H E++KYL + + V +L+ +
Sbjct: 1621 IKNAEIIDEEVSRLVCSDPIAVCHIPEALKYLCTTKNLLQESPDLVYILSWSPVTPIQAL 1680
Query: 455 QGVSVQQETTEITEQNPIHFDNENEFNTVSP-TEQLIAAPRKD 580
S Q + +T Q + + +V P QL+ A R D
Sbjct: 1681 AYFSRQYPSHPLTAQYAVKTLSSYPAESVLPYIPQLVQALRHD 1723
>AE014298-425|AAF45800.2| 2178|Drosophila melanogaster CG10260-PB
protein.
Length = 2178
Score = 29.5 bits (63), Expect = 3.8
Identities = 26/103 (25%), Positives = 45/103 (43%), Gaps = 1/103 (0%)
Frame = +2
Query: 275 LQNFEEIDETSSKIVVNLQVADIHNHESIKYLRCSSTVQDSQEQGVVVLNEIHCQELPDQ 454
++N E IDE S++V + +A H E++KYL + + V +L+ +
Sbjct: 1639 IKNAEIIDEEVSRLVCSDPIAVCHIPEALKYLCTTKNLLQESPDLVYILSWSPVTPIQAL 1698
Query: 455 QGVSVQQETTEITEQNPIHFDNENEFNTVSP-TEQLIAAPRKD 580
S Q + +T Q + + +V P QL+ A R D
Sbjct: 1699 AYFSRQYPSHPLTAQYAVKTLSSYPAESVLPYIPQLVQALRHD 1741
>AE014297-2411|AAF55470.2| 587|Drosophila melanogaster CG17803-PA
protein.
Length = 587
Score = 29.5 bits (63), Expect = 3.8
Identities = 30/145 (20%), Positives = 63/145 (43%), Gaps = 4/145 (2%)
Frame = +2
Query: 200 QKLLHGFINYYNDLPNQVYKTEVGVLQNFEEIDETSSKIVVNLQVADIHNHESIKYLRCS 379
++L H + + N+ + Q +++ +T+ K N+Q+ D ++ +
Sbjct: 127 KELPHHICSTCQETVNKSMEFRAKCQQVDKKLRQTTEKY--NIQICDEEMESELENVLYE 184
Query: 380 STVQDSQEQGVVVLNEIHCQELPDQQGVSVQQETTEITEQNPIHFD-NENEFNTVSPTEQ 556
+ Q Q +GVV L + + LPD +GV + + + P F +E+E + TE+
Sbjct: 185 ESAQ--QAKGVVGLEDFSSELLPDSEGVLDEDDFP--LDAEPTQFSLSEDELDLDRDTEK 240
Query: 557 LIAAPRKDGFSPCIG---CSTRVDV 622
A + + I C T+ ++
Sbjct: 241 DFALEQNKSCNEIISIRKCKTKEEI 265
>AF243382-1|AAF68440.1| 1548|Drosophila melanogaster cytoplasmic
protein encore protein.
Length = 1548
Score = 28.7 bits (61), Expect = 6.7
Identities = 19/74 (25%), Positives = 30/74 (40%), Gaps = 3/74 (4%)
Frame = +2
Query: 344 HNHESIKYLRCSSTVQDSQEQGVVVLNE---IHCQELPDQQGVSVQQETTEITEQNPIHF 514
H H + + SS Q + ++ I + P QQ QQ++ Q +
Sbjct: 40 HEHNNNNNINSSSKAQSAGRGNSPLMETPAVIVTSQQPQQQQQQQQQQSVPPKPQQNVPL 99
Query: 515 DNENEFNTVSPTEQ 556
NE EF VSP ++
Sbjct: 100 SNEAEFPNVSPPKK 113
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,715,391
Number of Sequences: 53049
Number of extensions: 547828
Number of successful extensions: 1568
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1507
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1568
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2559155400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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