Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12p04f
         (660 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        25   0.55 
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    25   0.73 
AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16 pro...    24   1.3  
AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3 prot...    24   1.3  
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    22   5.1  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    22   5.1  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    22   5.1  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    22   5.1  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    22   5.1  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    22   5.1  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    21   6.8  

>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 25.0 bits (52), Expect = 0.55
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = +2

Query: 425 ETPSGLKFVMNTDNQ 469
           ETPSG+  ++N DNQ
Sbjct: 472 ETPSGISSLLNLDNQ 486


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 24.6 bits (51), Expect = 0.73
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = -2

Query: 164 KKITNFHKINIPDYKNNNINIFDLMNDSYFTFCYFI 57
           K + N + IN  ++K +  N +  +    F FCYFI
Sbjct: 117 KLLINLYTINY-NFKESERNDYVSLLQLVFVFCYFI 151


>AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16
           protein.
          Length = 384

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 11/37 (29%), Positives = 16/37 (43%)
 Frame = +2

Query: 245 LLYYGEWNRSKQSGMSIEEEGKLMYGMLFSIKSFVSK 355
           LL  G WN   Q    +     L   M+ S+ SF+ +
Sbjct: 97  LLSMGGWNEGSQKYSQVAANPGLRQAMVTSVLSFIDQ 133


>AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3
           protein.
          Length = 384

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 11/37 (29%), Positives = 16/37 (43%)
 Frame = +2

Query: 245 LLYYGEWNRSKQSGMSIEEEGKLMYGMLFSIKSFVSK 355
           LL  G WN   Q    +     L   M+ S+ SF+ +
Sbjct: 97  LLSMGGWNEGSQKYSQVAANPGLRQAMVTSVLSFIDQ 133


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = -1

Query: 363 GEIFETNDFIEKSIPYINL 307
           G  ++ + FI+K+I ++NL
Sbjct: 128 GSFYQPDYFIDKNIVFVNL 146


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = -1

Query: 363 GEIFETNDFIEKSIPYINL 307
           G  ++ + FI+K+I ++NL
Sbjct: 128 GSFYQPDYFIDKNIVFVNL 146


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = -1

Query: 363 GEIFETNDFIEKSIPYINL 307
           G  ++ + FI+K+I ++NL
Sbjct: 128 GSFYQPDYFIDKNIVFVNL 146


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = -1

Query: 363 GEIFETNDFIEKSIPYINL 307
           G  ++ + FI+K+I ++NL
Sbjct: 128 GSFYQPDYFIDKNIVFVNL 146


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = -1

Query: 363 GEIFETNDFIEKSIPYINL 307
           G  ++ + FI+K+I ++NL
Sbjct: 128 GSFYQPDYFIDKNIVFVNL 146


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 7/29 (24%), Positives = 13/29 (44%)
 Frame = -2

Query: 158 ITNFHKINIPDYKNNNINIFDLMNDSYFT 72
           +TN   +  P Y N +++     N  Y +
Sbjct: 353 VTNLTNLTYPSYYNQDVSCTHYQNPEYIS 381


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +3

Query: 210 FTIYTYSIDMVLYCIMVSGIVQNS 281
           F I    I ++LYCI+   ++ N+
Sbjct: 245 FFIIPLIILLILYCIIAKNLMSNA 268


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,713
Number of Sequences: 336
Number of extensions: 3304
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17073220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)