Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12p04f
(660 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 22 6.0
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 22 6.0
DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 21 7.9
DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 21 7.9
DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 21 7.9
DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 21 7.9
DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 21 7.9
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 21 7.9
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 21 7.9
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 21 7.9
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 21 7.9
AB072429-1|BAB83990.1| 388|Apis mellifera IP3phosphatase protein. 21 7.9
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 21.8 bits (44), Expect = 6.0
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +1
Query: 307 QINVRNAFLDKIIRFKDF 360
Q+ R +LD+ +RF DF
Sbjct: 83 QLTFREQWLDERLRFNDF 100
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 21.8 bits (44), Expect = 6.0
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +1
Query: 307 QINVRNAFLDKIIRFKDF 360
Q+ R +LD+ +RF DF
Sbjct: 83 QLTFREQWLDERLRFNDF 100
>DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.4 bits (43), Expect = 7.9
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = -2
Query: 119 NNNINIFDLMNDSYFTFCYFIICIKE 42
+NN N + N++Y CY I I++
Sbjct: 86 SNNYNYSNYNNNNYKQLCYNINYIEQ 111
>DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.4 bits (43), Expect = 7.9
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = -2
Query: 119 NNNINIFDLMNDSYFTFCYFIICIKE 42
+NN N + N++Y CY I I++
Sbjct: 86 SNNYNYSNYNNNNYKQLCYNINYIEQ 111
>DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.4 bits (43), Expect = 7.9
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = -2
Query: 119 NNNINIFDLMNDSYFTFCYFIICIKE 42
+NN N + N++Y CY I I++
Sbjct: 86 SNNYNYSNYNNNNYKQLCYNINYIEQ 111
>DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.4 bits (43), Expect = 7.9
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = -2
Query: 119 NNNINIFDLMNDSYFTFCYFIICIKE 42
+NN N + N++Y CY I I++
Sbjct: 86 SNNYNYSNYNNNNYKQLCYNINYIEQ 111
>DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.4 bits (43), Expect = 7.9
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = -2
Query: 119 NNNINIFDLMNDSYFTFCYFIICIKE 42
+NN N + N++Y CY I I++
Sbjct: 86 SNNYNYSNYNNNNYKQLCYNINYIEQ 111
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.4 bits (43), Expect = 7.9
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = -2
Query: 272 NDSTHHNTIKYHIDRICINCKLSFFILSLE 183
N++ H+N KY+ + N KL + I +E
Sbjct: 87 NNTIHNNNYKYNYNNNNYNKKLYYNINYIE 116
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.4 bits (43), Expect = 7.9
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = -2
Query: 272 NDSTHHNTIKYHIDRICINCKLSFFILSLE 183
N++ H+N KY+ + N KL + I +E
Sbjct: 87 NNTIHNNNYKYNYNNNNYNKKLYYNINYIE 116
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.4 bits (43), Expect = 7.9
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = -2
Query: 272 NDSTHHNTIKYHIDRICINCKLSFFILSLE 183
N++ H+N KY+ + N KL + I +E
Sbjct: 87 NNTIHNNNYKYNYNNNNYNKKLYYNINYIE 116
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.4 bits (43), Expect = 7.9
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = -2
Query: 272 NDSTHHNTIKYHIDRICINCKLSFFILSLE 183
N++ H+N KY+ + N KL + I +E
Sbjct: 87 NNTIHNNNYKYNYNNNNYNKKLYYNINYIE 116
>AB072429-1|BAB83990.1| 388|Apis mellifera IP3phosphatase protein.
Length = 388
Score = 21.4 bits (43), Expect = 7.9
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -1
Query: 273 ERFHSP*YNKVPY 235
+RFH+ Y+ VPY
Sbjct: 211 DRFHNDKYSNVPY 223
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,214
Number of Sequences: 438
Number of extensions: 3515
Number of successful extensions: 14
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19855845
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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