Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12o21f
         (586 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    28   0.051
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    23   1.9  
AY563109-1|AAS99587.1|   46|Tribolium castaneum aristaless protein.    23   2.5  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    22   3.3  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    21   5.8  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    21   7.7  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 28.3 bits (60), Expect = 0.051
 Identities = 15/43 (34%), Positives = 25/43 (58%)
 Frame = -2

Query: 543 IVXVYFYFCL*LISQIALFFLNLLSLYTDLFDSFKISRFHLLF 415
           ++ +Y+++C  +I  + L F  LL +Y   F +F I   HLLF
Sbjct: 143 LLCIYYFYCAFIIFTVHLLF--LLCIY-HFFCAFIIFTMHLLF 182



 Score = 22.6 bits (46), Expect = 2.5
 Identities = 11/51 (21%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
 Frame = -2

Query: 546 NIVXVYFYFCL*LISQIALFFL---NLLSLYTDLFDSFKISRFHLLFDIYF 403
           N+  +Y+++C+ +   + L FL      +++   +  F I   H L   Y+
Sbjct: 52  NLRRIYYFYCVSITFNVHLLFLLCSGYFTVHLLFYCPFIIFTVHFLLCTYY 102


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = -3

Query: 242 LPQSMSAISSTDAILKFTFEVIYLV 168
           +P  + +   + AIL+  FEVI++V
Sbjct: 66  VPTKLISFYKSTAILEIAFEVIFIV 90


>AY563109-1|AAS99587.1|   46|Tribolium castaneum aristaless protein.
          Length = 46

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 9/26 (34%), Positives = 12/26 (46%)
 Frame = -1

Query: 244 HYPNQCRRFHLQMPF*SLRLRLSIWF 167
           HYP+   R  L M       R+ +WF
Sbjct: 20  HYPDVFTREELAMKIGLTEARIQVWF 45


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -1

Query: 448 LFQNFSLSSPVRYIFSSNVLWS 383
           LF   +L+   R+ FSS+V WS
Sbjct: 67  LFLEMTLAHHCRFKFSSSVGWS 88


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +1

Query: 364 KLITAFPTTGRYWKI 408
           KLI   P  GR WK+
Sbjct: 284 KLILGIPAYGRAWKM 298


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = +1

Query: 523 IEIDXYYILITVCWCVAYLD 582
           +EI+ YY ++  C  + YL+
Sbjct: 324 LEIEKYYNILYFCRIMVYLN 343


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,580
Number of Sequences: 336
Number of extensions: 3175
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14621740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)