Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12o21f
(586 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase pro... 26 0.31
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 24 1.3
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 24 1.3
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 24 1.3
DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor pro... 23 2.2
DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor pro... 23 2.2
AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled rec... 23 2.2
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase... 23 2.2
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 22 5.1
DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like recept... 21 6.7
M29492-1|AAA27727.1| 74|Apis mellifera protein ( Bee homeobox-... 21 8.9
AY217747-1|AAP45005.1| 246|Apis mellifera short-chain dehydroge... 21 8.9
>AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase
protein.
Length = 580
Score = 25.8 bits (54), Expect = 0.31
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +1
Query: 274 EANIYDV-DSWSLLVREAQARNINDVRTMYEKLITAFPTTGRYWK 405
++ YDV SW L+ E R +D R + + T F T +Y+K
Sbjct: 261 QSETYDVLRSWRNLMDEHSNRTNSDPRMILTEAYTEFNLTIKYYK 305
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 23.8 bits (49), Expect = 1.3
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +3
Query: 369 DNGIPDHRTLLENIYRT 419
DN + H LL N+Y T
Sbjct: 395 DNALASHNNLLNNVYST 411
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 23.8 bits (49), Expect = 1.3
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = -2
Query: 498 IALFFLNLLSLYT-DLFDSFKISRFHLLFDIYF 403
I LF + +Y L DS+ +S F LLF ++F
Sbjct: 429 IGLFCITEGGMYVFQLLDSYAVSGFCLLFLMFF 461
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 23.8 bits (49), Expect = 1.3
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = -2
Query: 498 IALFFLNLLSLYT-DLFDSFKISRFHLLFDIYF 403
I LF + +Y L DS+ +S F LLF ++F
Sbjct: 482 IGLFCITEGGMYVFQLLDSYAVSGFCLLFLMFF 514
>DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 23.0 bits (47), Expect = 2.2
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = -1
Query: 478 LTLFVY*PFRLFQNFSLSS 422
L++F Y P R+ QNF + S
Sbjct: 59 LSVFTYRPLRIVQNFFIVS 77
>DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 23.0 bits (47), Expect = 2.2
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = -1
Query: 478 LTLFVY*PFRLFQNFSLSS 422
L++F Y P R+ QNF + S
Sbjct: 59 LSVFTYRPLRIVQNFFIVS 77
>AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled
receptor protein.
Length = 399
Score = 23.0 bits (47), Expect = 2.2
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = -1
Query: 478 LTLFVY*PFRLFQNFSLSS 422
L++F Y P R+ QNF + S
Sbjct: 59 LSVFTYRPLRIVQNFFIVS 77
>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
protein.
Length = 1143
Score = 23.0 bits (47), Expect = 2.2
Identities = 10/35 (28%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +3
Query: 282 HIRCGLLVIASKRSPGPKHQR-CPNHVREVDNGIP 383
H+ ++ ++ GP H C N++RE+ +G P
Sbjct: 913 HLTVAVVQYKTQDGFGPIHYGVCSNYLREISDGEP 947
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 21.8 bits (44), Expect = 5.1
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3
Query: 336 HQRCPNHVREVDNGIPDHRTL 398
H + P+ +RE+ IPD RTL
Sbjct: 378 HPQHPDILRELLKKIPDLRTL 398
>DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like receptor
2 protein.
Length = 581
Score = 21.4 bits (43), Expect = 6.7
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = -1
Query: 286 ICWLRLHAGRGIGVHYPN 233
ICW HA R + V+ N
Sbjct: 296 ICWAPFHAQRLLAVYAQN 313
>M29492-1|AAA27727.1| 74|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H40. ).
Length = 74
Score = 21.0 bits (42), Expect = 8.9
Identities = 9/34 (26%), Positives = 17/34 (50%)
Frame = -1
Query: 241 YPNQCRRFHLQMPF*SLRLRLSIWF*VRATVFRR 140
Y + C R +L + ++ IWF R T +++
Sbjct: 32 YLSVCERLNLALSLSLTETQVKIWFQNRRTKWKK 65
>AY217747-1|AAP45005.1| 246|Apis mellifera short-chain
dehydrogenase/reductase protein.
Length = 246
Score = 21.0 bits (42), Expect = 8.9
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -2
Query: 123 TDCLWTHYSQC*NRFKTI 70
TDCL + +QC + K I
Sbjct: 172 TDCLRSELAQCESNIKVI 189
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,836
Number of Sequences: 438
Number of extensions: 3594
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16993167
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -