Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12o17r
(713 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_04_0090 - 13391028-13391117,13391369-13391502,13391532-133916... 35 0.056
02_05_0130 - 26070784-26070801,26071440-26072627 33 0.23
01_01_1220 + 9862195-9862281,9862427-9862646,9862764-9862916,986... 33 0.23
05_01_0158 - 1067721-1067827,1067951-1068008,1068276-1068334,106... 32 0.39
01_03_0241 - 14111286-14111935,14111992-14112115 32 0.39
11_01_0347 + 2601170-2602019,2602245-2603353 31 0.69
03_03_0042 + 14009649-14009866,14011342-14011419,14011791-140119... 31 0.69
06_03_0536 + 21906583-21908037 30 1.6
03_06_0217 - 32432590-32433495 30 2.1
11_03_0177 + 11269754-11270320,11271701-11272180,11272663-112732... 29 2.8
06_03_0093 - 16567817-16568077,16568613-16568710,16568770-16568968 29 2.8
06_02_0155 + 12380452-12381012 29 2.8
05_04_0202 - 19010953-19013355 29 2.8
03_02_0155 - 5974118-5974173,5974242-5974314,5974393-5974500,597... 29 2.8
02_03_0345 + 17973509-17974131,17974207-17974537,17974624-179749... 29 2.8
12_01_1114 + 11899808-11900089,11900278-11900451,11901269-11901604 29 3.7
09_06_0277 - 21983049-21983080,21983250-21984788,21986619-219866... 29 3.7
08_01_0377 - 3331696-3332371,3334063-3334472 29 3.7
10_08_0605 + 19158167-19158309,19158726-19158834,19159099-191592... 29 4.8
07_03_1625 - 28219006-28219041,28219150-28219227,28219318-282193... 29 4.8
07_01_0504 + 3756714-3757054,3757205-3757259,3757403-3757477,375... 29 4.8
02_03_0407 - 18675368-18675378,18676047-18676977,18677323-186773... 29 4.8
02_03_0346 + 17981337-17981720,17981811-17982185 29 4.8
11_06_0154 + 20707811-20708210,20709252-20709523 28 6.4
10_08_1031 - 22427691-22428086 28 6.4
09_04_0748 + 19901687-19902460 28 6.4
07_03_1575 - 27848977-27849095,27849254-27849302,27850270-278502... 28 6.4
06_03_0037 + 15773444-15773647,15773862-15774367,15775011-157752... 28 6.4
05_01_0351 + 2750253-2751042,2751951-2751958,2752122-2752149,275... 28 6.4
04_04_0835 + 28538032-28539006,28539113-28539203,28539291-285394... 28 6.4
03_03_0028 + 13893813-13893959,13894961-13895264,13896557-138967... 28 6.4
03_02_0268 - 6994095-6994555,6996873-6996982,6997237-6998612 28 6.4
01_01_0483 - 3550429-3551184 28 6.4
11_06_0557 - 24955837-24956214,24957225-24957395,24957576-249576... 28 8.5
07_03_1258 + 25244863-25245282,25246419-25246568,25246665-252468... 28 8.5
04_03_0594 - 17733827-17735085,17735576-17735642,17736379-177364... 28 8.5
04_01_0520 - 6852701-6855028,6855050-6855835,6856085-6856093 28 8.5
03_01_0474 + 3646724-3646789,3648952-3649067,3649547-3649595,364... 28 8.5
01_06_0111 + 26552513-26553361 28 8.5
>11_04_0090 -
13391028-13391117,13391369-13391502,13391532-13391659,
13391684-13391718,13391719-13392159
Length = 275
Score = 35.1 bits (77), Expect = 0.056
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +3
Query: 153 PMGQARGAPPSPWQVSLPSCPPAHTKLSCRRNLVP 257
P+ +A+ PP+ Q LP+ PP H LSC + P
Sbjct: 27 PLSRAKTPPPALLQAILPTAPPKHHSLSCSGSQAP 61
>02_05_0130 - 26070784-26070801,26071440-26072627
Length = 401
Score = 33.1 bits (72), Expect = 0.23
Identities = 17/35 (48%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = +2
Query: 110 DAPGDQPGQLVAAVTYGTGQGG--STVALASVPAL 208
DAPG PG LV+ V G G G ALA++PA+
Sbjct: 228 DAPGRLPGSLVSVVARGNGFAGPLQAAALAALPAM 262
>01_01_1220 +
9862195-9862281,9862427-9862646,9862764-9862916,
9863016-9863674,9863749-9863852,9863950-9864192,
9864262-9864376,9864696-9864909,9864995-9865511,
9866439-9866448,9867363-9867551,9867755-9868084,
9868639-9868872,9869303-9869743
Length = 1171
Score = 33.1 bits (72), Expect = 0.23
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = +2
Query: 92 VLLPAPDAPGDQPGQLVAAVTYGTGQGGSTVALASVPALLSPG 220
V+LP DA D+P +VA+ + G GG T A+ P L++PG
Sbjct: 494 VILPTEDAKDDKPAPVVASFS-ARGPGGLTEAILK-PDLMAPG 534
>05_01_0158 -
1067721-1067827,1067951-1068008,1068276-1068334,
1069009-1069087,1069177-1069233,1069531-1069580,
1069805-1069886,1070431-1070487,1070741-1070828,
1071171-1071247,1071325-1071443,1071719-1071950
Length = 354
Score = 32.3 bits (70), Expect = 0.39
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +2
Query: 77 VDRGHVLLPAPDAPGDQPGQLVAAVTYGTGQGG 175
+ RGHV LP +PG P VAA + TG+GG
Sbjct: 28 IGRGHVALPP--SPGRYPAVTVAAASRRTGEGG 58
>01_03_0241 - 14111286-14111935,14111992-14112115
Length = 257
Score = 32.3 bits (70), Expect = 0.39
Identities = 25/84 (29%), Positives = 35/84 (41%)
Frame = -1
Query: 278 AAAANQTWDQVPSARQFRVRRGTGGQGHLPGRRWSPPGLSHR*QPLQVGRAGRLGHRVRA 99
A AA W A + R RRG+GG+G + G R + Q+ R G V
Sbjct: 168 ATAARARWSSGKKAARARWRRGSGGEGEVELGEEGGKGEVERRRAAQIWGCRRRGELV-G 226
Query: 98 EGRARGLRQRGPHEVLGRPEDERV 27
+RG R+ G + G E+ V
Sbjct: 227 GADSRGRRRGGAADGWGGGEEAAV 250
>11_01_0347 + 2601170-2602019,2602245-2603353
Length = 652
Score = 31.5 bits (68), Expect = 0.69
Identities = 16/31 (51%), Positives = 16/31 (51%)
Frame = -1
Query: 644 WRSHRLQVRPGQFEGESRRMGHPDHQGNAGP 552
WR RLQ RP F GE R P HQG P
Sbjct: 186 WRG-RLQTRPPGFRGEGWRPPAPFHQGRQDP 215
>03_03_0042 +
14009649-14009866,14011342-14011419,14011791-14011955,
14012071-14012138,14012219-14012258,14013579-14013690,
14013859-14013942
Length = 254
Score = 31.5 bits (68), Expect = 0.69
Identities = 21/63 (33%), Positives = 27/63 (42%), Gaps = 3/63 (4%)
Frame = -1
Query: 713 SAGRFERIVRWSRSPDTSSSRHDWRSHRLQVRPGQF---EGESRRMGHPDHQGNAGPPSE 543
S R R S SP S +R D+R HR PG+ G+ +R H G + P E
Sbjct: 166 SVSRSPRSRYHSYSPSPSPARRDYRDHRDDYSPGESLSPHGQDKR--HHRSNGRSASPDE 223
Query: 542 TRR 534
R
Sbjct: 224 LER 226
>06_03_0536 + 21906583-21908037
Length = 484
Score = 30.3 bits (65), Expect = 1.6
Identities = 32/106 (30%), Positives = 43/106 (40%), Gaps = 3/106 (2%)
Frame = +2
Query: 2 SVSGGSVTPRVHLPVDPRPHAGHVGVDRGHVLLPAPDAPGDQPGQLVAAVTYGTGQGGST 181
S S S VH P P P A + + +L PAP P P ++ Q +
Sbjct: 24 SSSSSSGDDDVHCPTAPPPAAALLCL----LLSPAPTLPASDPPAILFQTLPPLAQSQAL 79
Query: 182 VALASVPALLSPG---AHETVVQTEPGPKSGSLQQRIAARVRHHID 310
LAS LL P + T V +EP + G +R A RH +D
Sbjct: 80 SFLASSAGLLDPALVRSLATRVLSEPSGRYGLWARRGA---RHLLD 122
>03_06_0217 - 32432590-32433495
Length = 301
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/70 (25%), Positives = 29/70 (41%), Gaps = 1/70 (1%)
Frame = +2
Query: 77 VDRGHVLLPAPDAPGDQPGQLVAAVTYGTGQGGSTV-ALASVPALLSPGAHETVVQTEPG 253
V G +L APD PG ++ + + G G T A A+ P+ S T + G
Sbjct: 226 VSSGRAMLAAPDQPGAGRDDMIDMLNWRRGSHGPTASAAATTPSPASTTTTLTTFASADG 285
Query: 254 PKSGSLQQRI 283
+G + +
Sbjct: 286 SNNGEENEEL 295
>11_03_0177 + 11269754-11270320,11271701-11272180,11272663-11273292,
11273377-11273443,11273510-11273620,11273696-11275206
Length = 1121
Score = 29.5 bits (63), Expect = 2.8
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = -2
Query: 493 KNDVALLRMHAPFNLAEHINMICLPDPGDSFDTSKNCVA--NGWGKDVFGLQGRYAVIL 323
+ +AL M++ NLAE INM+ + D F+ C++ G DV L+ R +L
Sbjct: 965 REGIALGLMYSFTNLAESINMLNVHDDNAVFEHKMRCISVLEADGFDVRHLRSRLETLL 1023
>06_03_0093 - 16567817-16568077,16568613-16568710,16568770-16568968
Length = 185
Score = 29.5 bits (63), Expect = 2.8
Identities = 30/86 (34%), Positives = 37/86 (43%), Gaps = 6/86 (6%)
Frame = -1
Query: 278 AAAANQTWDQVPSARQFRVRRGT----GGQGHLPGRRWSPPGLSHR*QPLQVGRAGRLGH 111
AAA + + V +A + RVRRG GG G G RW S R + G + H
Sbjct: 9 AAAVDSATESVSAASESRVRRGEEVVGGGDG---GGRWRVLSWSSREATVDAGAV--VPH 63
Query: 110 RVRAEGRARGL--RQRGPHEVLGRPE 39
R E AR L RQ V+ PE
Sbjct: 64 VGRGENPARPLSDRQLWRSSVISPPE 89
>06_02_0155 + 12380452-12381012
Length = 186
Score = 29.5 bits (63), Expect = 2.8
Identities = 24/71 (33%), Positives = 27/71 (38%), Gaps = 1/71 (1%)
Frame = +2
Query: 35 HLPVDPRPHAGHVGVDRGHVLLPAPDAPGDQPGQLVAAVTYGTGQ-GGSTVALASVPALL 211
H P P PHAG G AP AP P V A TYG Q A P ++
Sbjct: 36 HKP-SPPPHAGGAVNGNGGA---APPAPATSPDTEVRAPTYGDKQISPPKEGAAGKPPMV 91
Query: 212 SPGAHETVVQT 244
P A+ T
Sbjct: 92 VPAANHPQAPT 102
>05_04_0202 - 19010953-19013355
Length = 800
Score = 29.5 bits (63), Expect = 2.8
Identities = 21/69 (30%), Positives = 28/69 (40%)
Frame = -2
Query: 304 MVPNPRCNSLLQRTRLGTRFRLHDSFVCAGGQEGRDTCQGDGGAPLACPIGDSRYKLAGL 125
+V PR L R RFR D V G D G GG ++ + +R + GL
Sbjct: 23 VVARPRRAGLACAARSCYRFRTDDDGVVDVAVSGEDGDGGGGGYAVSVEVPGTRGREGGL 82
Query: 124 VAWGIGCGQ 98
V G G+
Sbjct: 83 VLRASGSGE 91
>03_02_0155 -
5974118-5974173,5974242-5974314,5974393-5974500,
5975189-5976914,5977065-5977620,5978008-5978485
Length = 998
Score = 29.5 bits (63), Expect = 2.8
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 5/82 (6%)
Frame = -1
Query: 674 SPDTSSSRHDWRSHRLQVRPGQFEGESRRMGHP---DHQGN-AGPPSETRR-GNNHTRRF 510
+P T S D R H+L + + +S +GHP D GN + +TRR G + +R
Sbjct: 270 APCTERSLED-REHQLMSKSNPVKHDSDELGHPVKEDLSGNDSDRGQQTRRHGRSQWKRS 328
Query: 509 QHEKP*ERRGAPADARALQPRR 444
+ + P RR +++L R
Sbjct: 329 RGQSPQGRRSCSPLSQSLSSGR 350
>02_03_0345 +
17973509-17974131,17974207-17974537,17974624-17974985,
17975314-17975572
Length = 524
Score = 29.5 bits (63), Expect = 2.8
Identities = 21/85 (24%), Positives = 36/85 (42%)
Frame = +2
Query: 116 PGDQPGQLVAAVTYGTGQGGSTVALASVPALLSPGAHETVVQTEPGPKSGSLQQRIAARV 295
P P QL+ ++ G+ Q G+ + A+V +S + + + + AAR+
Sbjct: 305 PDSCPDQLIRSLCIGSLQAGTDTSAATVEWAMSLLLNNPGAMARARGEIDACVGQPAARL 364
Query: 296 RHHIDFDFLQYHRVSALETKDVLPP 370
D L Y R +ET + PP
Sbjct: 365 LEAADLPKLHYLRCVVMETLRLYPP 389
>12_01_1114 + 11899808-11900089,11900278-11900451,11901269-11901604
Length = 263
Score = 29.1 bits (62), Expect = 3.7
Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Frame = -1
Query: 215 GTGGQGHLP-GRRWSPPGLSHR*QPLQVGRAGRLGHRVRA-EGRARGLRQRGPHEVLGRP 42
G+GG P G+RW+ +HR + L G G R+RA +G R G +GRP
Sbjct: 19 GSGGGRERPHGQRWTAAAAAHR-EDLVSGGGGWGRRRLRATDGDLRPAAVDGEAPAVGRP 77
>09_06_0277 -
21983049-21983080,21983250-21984788,21986619-21986655,
21987612-21987665,21987781-21987893,21988272-21988660,
21988783-21988903,21989245-21989342,21989963-21990153
Length = 857
Score = 29.1 bits (62), Expect = 3.7
Identities = 28/81 (34%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Frame = +2
Query: 20 VTPRVHLPVDP-RPHAGHVGVDRGHVLLPAPDA-PGDQPGQLVAAVTYG-TGQGGSTVAL 190
VTP+V P+ P AG+ V +V AP + P P A V Y T QG T
Sbjct: 214 VTPQVSQPLFPVSTSAGNGAVSSPYVASVAPGSIPTSSPSVAPAGVGYAATNQG--TGGP 271
Query: 191 ASVPALLSPGAHETVVQTEPG 253
A+VP P ++ T+PG
Sbjct: 272 AAVPP---PASNNKAPATQPG 289
>08_01_0377 - 3331696-3332371,3334063-3334472
Length = 361
Score = 29.1 bits (62), Expect = 3.7
Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Frame = +2
Query: 11 GGSVTPRVHLPVDPRPHAGHVGVDRGHVLLPAPDAPGDQ--PGQLVAAVTYG 160
GG V V V PH + D HV+ AP PG + G + A+V G
Sbjct: 205 GGGVGATVAAVVSRHPHIRGINYDLPHVISEAPPFPGVEHVGGDMFASVPRG 256
>10_08_0605 +
19158167-19158309,19158726-19158834,19159099-19159224,
19159388-19159543,19159623-19159805,19159904-19160020,
19160528-19160581,19160661-19160732,19160947-19161058,
19161188-19161284,19161434-19161528,19162093-19162167,
19162307-19162390,19162602-19162700,19163167-19163207
Length = 520
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/49 (34%), Positives = 22/49 (44%)
Frame = +2
Query: 173 GSTVALASVPALLSPGAHETVVQTEPGPKSGSLQQRIAARVRHHIDFDF 319
G+ VA +V LL+PGA + P G AA R H+ F F
Sbjct: 7 GAAVAAVAVLLLLAPGAEPIGLWLPPPTGGGGRLGGAAAPGRFHVSFTF 55
>07_03_1625 -
28219006-28219041,28219150-28219227,28219318-28219389,
28219468-28219567,28219632-28219708,28219802-28219872,
28219987-28220066,28220143-28220194,28220376-28220431,
28220506-28220551,28220631-28220682,28220787-28220888,
28220967-28221021,28221101-28221180,28221271-28221321,
28221354-28221377,28221742-28221833,28221928-28222057,
28222156-28222230,28222433-28222543,28222637-28222693
Length = 498
Score = 28.7 bits (61), Expect = 4.8
Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Frame = +2
Query: 398 VEAIPRVREADHVDVL-GEVEGRVHPQERHVVLKAFRVEIFVYDYFLDESHLVVQHFLDG 574
VE +++E ++ L G + +HP+ H + V+++ Y + L V H+L G
Sbjct: 173 VELAKKLQEETNIKPLWGTAQLFMHPRYMHGAATSPEVKVYAYGAAQVKKALEVTHYLGG 232
Query: 575 LGVPFSGSR 601
F G R
Sbjct: 233 ENYVFWGGR 241
>07_01_0504 +
3756714-3757054,3757205-3757259,3757403-3757477,
3757638-3757729,3757914-3757995,3758138-3758221,
3758326-3758445
Length = 282
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -3
Query: 126 WSPGASGAGRRTCPRSTPTWPA 61
WS G G GR P S P WPA
Sbjct: 33 WSNGGGGGGRLVAPPSAP-WPA 53
>02_03_0407 -
18675368-18675378,18676047-18676977,18677323-18677376,
18677809-18678039,18678112-18678319,18678405-18678433,
18678638-18678706,18678832-18678893,18679056-18679133,
18679243-18679315,18681135-18681260
Length = 623
Score = 28.7 bits (61), Expect = 4.8
Identities = 26/75 (34%), Positives = 32/75 (42%)
Frame = +2
Query: 8 SGGSVTPRVHLPVDPRPHAGHVGVDRGHVLLPAPDAPGDQPGQLVAAVTYGTGQGGSTVA 187
S SV+P+V + P P A + + H LLP P A D P + V Y G
Sbjct: 477 SSSSVSPKVSPKMSPVPPASSLKISELH-LLPLPPANVD-PVRPSGLVGY---SGPLVSK 531
Query: 188 LASVPALLSPGAHET 232
A PA SP A T
Sbjct: 532 RAPTPARASPKASRT 546
>02_03_0346 + 17981337-17981720,17981811-17982185
Length = 252
Score = 28.7 bits (61), Expect = 4.8
Identities = 22/85 (25%), Positives = 35/85 (41%)
Frame = +2
Query: 116 PGDQPGQLVAAVTYGTGQGGSTVALASVPALLSPGAHETVVQTEPGPKSGSLQQRIAARV 295
P P QL+ A+ G+ Q G+ + A V +S + + + + AAR+
Sbjct: 115 PDACPDQLIRALCIGSLQAGTETSAAVVEWAMSLLLNNPGAMARARGEIDACVGQPAARL 174
Query: 296 RHHIDFDFLQYHRVSALETKDVLPP 370
D L Y R +ET + PP
Sbjct: 175 LEAADLPKLHYLRCVVMETLRLYPP 199
>11_06_0154 + 20707811-20708210,20709252-20709523
Length = 223
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -1
Query: 641 RSHRLQVRPGQFEGESRRMGHPDHQGNAGPPSETRRGNN 525
R H L+ ++ GESRR+G + AG E G N
Sbjct: 71 RCHGLEKAEVEYGGESRRLGWEPTRHGAGDAGEAEWGRN 109
>10_08_1031 - 22427691-22428086
Length = 131
Score = 28.3 bits (60), Expect = 6.4
Identities = 18/36 (50%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = +2
Query: 29 RVHLPVDPRPHAGHVGVDR-GH-VLLPAPDAPGDQP 130
R HL P+P A H GV R GH V PAP +P P
Sbjct: 27 RAHL--GPKPPARHYGVRRVGHGVPAPAPPSPPPHP 60
>09_04_0748 + 19901687-19902460
Length = 257
Score = 28.3 bits (60), Expect = 6.4
Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +2
Query: 131 GQLVAAVTYGTGQ--GGSTVALASVPALLSPGAHETVVQTEPGP 256
G+L V G G+ GG VAL +PA LSP ++ PGP
Sbjct: 167 GRLRVPVEAGDGEDGGGGAVALPGLPA-LSPEGLPWFIKVGPGP 209
>07_03_1575 -
27848977-27849095,27849254-27849302,27850270-27850287,
27850798-27851786,27852119-27852733,27852893-27852921,
27853990-27854453,27854530-27854654,27854743-27855025,
27855112-27856102,27856965-27857576,27857666-27858630
Length = 1752
Score = 28.3 bits (60), Expect = 6.4
Identities = 28/114 (24%), Positives = 45/114 (39%), Gaps = 5/114 (4%)
Frame = +2
Query: 83 RGHVLLPAPDAPGD----QPGQLVAAVTYGTGQGGSTVALASVPALLSPGAHETVVQTE- 247
R V+ P P++ G Q AA + + VA A+ + E +
Sbjct: 139 RRRVVSPGPESSGKPLRRSARQAKAAARVAEMEAAAAVAAAAEAEAAAAAMAEAEAEAAV 198
Query: 248 PGPKSGSLQQRIAARVRHHIDFDFLQYHRVSALETKDVLPPAVGDAVLAGVEAI 409
P+SGS ++R + R+ L+ V L K LPP+ L G+ A+
Sbjct: 199 TPPQSGSKRKRASGAGRYRSVAKDLEKAAVERLPPKPELPPSSQSLDLEGLPAL 252
>06_03_0037 +
15773444-15773647,15773862-15774367,15775011-15775246,
15775483-15775685,15775989-15776279,15776997-15777084,
15777539-15777861
Length = 616
Score = 28.3 bits (60), Expect = 6.4
Identities = 25/76 (32%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
Frame = +2
Query: 41 PVDPRPHAGHVGVDRGHVLLPAPDAPGDQPGQLVAAVTYGTGQGGSTVALASVPALLS-P 217
P D R H +GVDR H++ + P D Q G G + AS P ++
Sbjct: 10 PFDVRSHVPTLGVDRSHLMQGSGVHPHDDV-QRGGLQQLGAGDREEEIQGASQPERIALH 68
Query: 218 GAHETVVQTEPGPKSG 265
GAH V E PK G
Sbjct: 69 GAH---VPDEMVPKFG 81
>05_01_0351 +
2750253-2751042,2751951-2751958,2752122-2752149,
2754692-2754775,2755780-2757548
Length = 892
Score = 28.3 bits (60), Expect = 6.4
Identities = 16/49 (32%), Positives = 18/49 (36%), Gaps = 1/49 (2%)
Frame = +3
Query: 81 TAGTSFCPHPMPQATSPANL*RLSPMGQARGAPPSPWQVS-LPSCPPAH 224
T F P P+ PA L P + PP P LP PP H
Sbjct: 699 TKSVGFAPPPLQPPARPAQHPHLQPPARPAQQPPRPPVTQPLPPPPPLH 747
>04_04_0835 +
28538032-28539006,28539113-28539203,28539291-28539448,
28539543-28539594,28539707-28539786,28539890-28539983,
28540078-28540633,28541160-28541259,28541576-28541617,
28542445-28542588
Length = 763
Score = 28.3 bits (60), Expect = 6.4
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +2
Query: 395 GVEAIPRVREADHVDVLGEVE 457
G+E P +R+AD DV+G+VE
Sbjct: 45 GLERSPSLRQADFADVVGDVE 65
>03_03_0028 +
13893813-13893959,13894961-13895264,13896557-13896761,
13897428-13897646,13897734-13897869,13899130-13899387,
13899402-13899686
Length = 517
Score = 28.3 bits (60), Expect = 6.4
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 8/85 (9%)
Frame = +2
Query: 398 VEAIPRVREADHVDVLG---EVEGRVHPQERHVVLKAFRVEIFVYDYFLDE----SHLVV 556
V +P A ++ +L E+E + P E+H V A + + +Y+L E SH +
Sbjct: 298 VSILPEYMHAYYIKLLSNFDEMENSLEPNEKHRVSYAITMYKQLSEYYLQEARWSSHRYL 357
Query: 557 QHFLDGLGV-PFSGSRPQIARGVLV 628
F + L V S P +A VL+
Sbjct: 358 PSFAEHLYVSSISSGIPALAPAVLM 382
>03_02_0268 - 6994095-6994555,6996873-6996982,6997237-6998612
Length = 648
Score = 28.3 bits (60), Expect = 6.4
Identities = 21/61 (34%), Positives = 28/61 (45%)
Frame = -2
Query: 226 VCAGGQEGRDTCQGDGGAPLACPIGDSRYKLAGLVAWGIGCGQKDVPAVYANVARMRSWV 47
+ GG E D GDGG P+ + R + L A G G G + VPAV+ + V
Sbjct: 24 ILGGGPELGDAAAGDGGKQ---PV-ELRKMMDELDAAGDGGGDEAVPAVFICPISLEPMV 79
Query: 46 D 44
D
Sbjct: 80 D 80
>01_01_0483 - 3550429-3551184
Length = 251
Score = 28.3 bits (60), Expect = 6.4
Identities = 21/76 (27%), Positives = 30/76 (39%), Gaps = 2/76 (2%)
Frame = +2
Query: 65 GHVGVDRGHVLLPAPD--APGDQPGQLVAAVTYGTGQGGSTVALASVPALLSPGAHETVV 238
G VG+ + AP A PGQL AAV+ G GG + + + P H
Sbjct: 136 GEVGIPTALPVTAAPRLAAAMPAPGQLAAAVSAGMYGGGRRLGVIDGGGIAPPSPHTAGC 195
Query: 239 QTEPGPKSGSLQQRIA 286
+GS+ +A
Sbjct: 196 YYARNNNAGSIGADVA 211
>11_06_0557 -
24955837-24956214,24957225-24957395,24957576-24957635,
24958419-24958623,24958710-24958953,24959103-24959394,
24959734-24960828,24960915-24961409,24961665-24961823,
24961893-24962387
Length = 1197
Score = 27.9 bits (59), Expect = 8.5
Identities = 26/83 (31%), Positives = 30/83 (36%), Gaps = 1/83 (1%)
Frame = +2
Query: 11 GGSVTPRVHLPVDPRPHAGHVGVDRGHVLLPAPDAPGDQPGQLVAAVTYGTGQGGSTVAL 190
GGS R P P G GV G P G PG A G +T ++
Sbjct: 52 GGSPASRAASPPPPTAAGGQGGVGGG----PVSGGGGSAPGGAATAQREGAPPAAAT-SV 106
Query: 191 ASVPALLSPGAHETVVQTEP-GP 256
P +P ETV Q P GP
Sbjct: 107 QGAPR--APATAETVPQGSPRGP 127
>07_03_1258 +
25244863-25245282,25246419-25246568,25246665-25246877,
25246979-25247068,25247311-25247424,25247881-25248150,
25248251-25248407,25248691-25248741,25248742-25248819,
25249357-25249457,25249832-25250002,25250136-25250210,
25251527-25251793
Length = 718
Score = 27.9 bits (59), Expect = 8.5
Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +2
Query: 119 GDQPGQLVAAVTYGTGQGGSTVALASVPALLSPGAHET-VVQTEPG 253
G P + +A + G G GG ASV ALL P A V T+PG
Sbjct: 23 GLPPPRPLAGMDRGVGVGGGGGGDASVAALLLPSAPMAYAVVTDPG 68
>04_03_0594 -
17733827-17735085,17735576-17735642,17736379-17736413,
17736810-17737665
Length = 738
Score = 27.9 bits (59), Expect = 8.5
Identities = 14/49 (28%), Positives = 20/49 (40%)
Frame = -2
Query: 178 GAPLACPIGDSRYKLAGLVAWGIGCGQKDVPAVYANVARMRSWVDRKMN 32
G C IGD + GIGC Q ++P + + W D + N
Sbjct: 137 GCAATCGIGDDLVSINSAGCSGIGCCQTNIP---KGIRYYKVWFDGRFN 182
>04_01_0520 - 6852701-6855028,6855050-6855835,6856085-6856093
Length = 1040
Score = 27.9 bits (59), Expect = 8.5
Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
Frame = +1
Query: 154 LWDRPGGLHRRPGKCPCPPVP---RRTRNCRAD 243
++DR L P CPCPP+P + R+C+ +
Sbjct: 729 IFDRVVALSVAPVICPCPPLPLESKCNRSCKVE 761
>03_01_0474 +
3646724-3646789,3648952-3649067,3649547-3649595,
3649641-3649697,3649743-3650993
Length = 512
Score = 27.9 bits (59), Expect = 8.5
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
Frame = -1
Query: 695 RIVRWSRSPDTSSSRHDWRS----HRLQVRPGQFEGESRRM 585
RI +W R+PD RH + S +RL V G+ EG R +
Sbjct: 277 RINKWLRAPDMLQKRHCFGSCVINNRLYVAGGECEGIQRTL 317
>01_06_0111 + 26552513-26553361
Length = 282
Score = 27.9 bits (59), Expect = 8.5
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = -1
Query: 104 RAEGRARGLRQRGPHEVL 51
+ EG A+GLRQRGP +L
Sbjct: 96 QGEGDAKGLRQRGPPHIL 113
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,839,778
Number of Sequences: 37544
Number of extensions: 641978
Number of successful extensions: 2893
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 2660
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2889
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1851002996
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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