Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12o17f
         (604 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ011021-1|CAB56834.1|  466|Homo sapiens cardiac potassium chann...    30   5.4  
AK127482-1|BAC86999.1| 1085|Homo sapiens protein ( Homo sapiens ...    30   7.2  
BT020128-1|AAV38930.1|  396|Homo sapiens cyclin B1 protein.            29   9.5  
BC006510-1|AAH06510.1|  433|Homo sapiens cyclin B1 protein.            29   9.5  
AY338491-1|AAP88038.1|  433|Homo sapiens cyclin B1 protein.            29   9.5  

>AJ011021-1|CAB56834.1|  466|Homo sapiens cardiac potassium channel
           subunit (Kv6.2) protein.
          Length = 466

 Score = 30.3 bits (65), Expect = 5.4
 Identities = 14/28 (50%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
 Frame = -2

Query: 318 CRASPAWGAFRRCSEAR-QGLRSCPGRD 238
           CR   AW A  RC  AR + LR+C G D
Sbjct: 26  CRVRLAWAALARCPLARLERLRACRGHD 53


>AK127482-1|BAC86999.1| 1085|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45574 fis, clone BRTHA3011187. ).
          Length = 1085

 Score = 29.9 bits (64), Expect = 7.2
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = -3

Query: 230 YQHRQQKRTHCASFIKTL*EREHTKFYVTVLRKLCT 123
           + +RQ +R H  + +K + E+EH +      R LCT
Sbjct: 868 FPNRQTRRNHLFTMMKNVTEQEHKQSLQLTFRSLCT 903


>BT020128-1|AAV38930.1|  396|Homo sapiens cyclin B1 protein.
          Length = 396

 Score = 29.5 bits (63), Expect = 9.5
 Identities = 10/22 (45%), Positives = 16/22 (72%)
 Frame = +3

Query: 510 ESVEICCTNPITEPVPKPQPDP 575
           E V +    P++EPVP+P+P+P
Sbjct: 84  EKVPMLVPVPVSEPVPEPEPEP 105


>BC006510-1|AAH06510.1|  433|Homo sapiens cyclin B1 protein.
          Length = 433

 Score = 29.5 bits (63), Expect = 9.5
 Identities = 10/22 (45%), Positives = 16/22 (72%)
 Frame = +3

Query: 510 ESVEICCTNPITEPVPKPQPDP 575
           E V +    P++EPVP+P+P+P
Sbjct: 84  EKVPMLVPVPVSEPVPEPEPEP 105


>AY338491-1|AAP88038.1|  433|Homo sapiens cyclin B1 protein.
          Length = 433

 Score = 29.5 bits (63), Expect = 9.5
 Identities = 10/22 (45%), Positives = 16/22 (72%)
 Frame = +3

Query: 510 ESVEICCTNPITEPVPKPQPDP 575
           E V +    P++EPVP+P+P+P
Sbjct: 84  EKVPMLVPVPVSEPVPEPEPEP 105


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,976,803
Number of Sequences: 237096
Number of extensions: 1993209
Number of successful extensions: 13423
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 12749
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13385
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6354183230
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)