Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12o12r
         (471 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    28   0.19 
M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.              27   0.44 
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    23   4.1  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    23   4.1  
AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein p...    23   4.1  
AY750997-1|AAV31069.1|  153|Anopheles gambiae peritrophin-1 prot...    23   5.4  
AY344823-1|AAR02434.1|  153|Anopheles gambiae peritrophin A prot...    23   5.4  
AY344828-1|AAR02439.1|  153|Anopheles gambiae peritrophin A prot...    23   7.1  
AY344827-1|AAR02438.1|  153|Anopheles gambiae peritrophin A prot...    23   7.1  
AY344826-1|AAR02437.1|  153|Anopheles gambiae peritrophin A prot...    23   7.1  
AY344825-1|AAR02436.1|  153|Anopheles gambiae peritrophin A prot...    23   7.1  
AY344824-1|AAR02435.1|  153|Anopheles gambiae peritrophin A prot...    23   7.1  
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    22   9.4  
AF457547-1|AAL68777.1|  163|Anopheles gambiae selenoprotein prot...    22   9.4  

>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 27.9 bits (59), Expect = 0.19
 Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
 Frame = -3

Query: 301 QAHKQKGPSRPQVDRPTKPQQNCIR*LQRQNQQESLLEVYPRVGKQ-QSIL 152
           Q  +Q+   RPQ  RP + +    R  QR+  +  L+EV P  G+  +S+L
Sbjct: 463 QQPQQQQQQRPQQQRPQQQRPQQQRSQQRKPAKPELIEVSPNEGQDWESLL 513



 Score = 25.0 bits (52), Expect = 1.3
 Identities = 24/106 (22%), Positives = 41/106 (38%)
 Frame = -3

Query: 445 QGSREASDRKRQEEHHGIRLPVMDKGWKGNRQILLPHPV*SDLHRADCQAHKQKGPSRPQ 266
           QG R    + RQ+     R     +  +  +Q      V   L +   Q   Q+   + Q
Sbjct: 260 QGERYVPPQLRQQRQQQQRPRQQQQQQQQQQQQQGERYVPPQLRQQRQQQQHQQQQQQQQ 319

Query: 265 VDRPTKPQQNCIR*LQRQNQQESLLEVYPRVGKQQSILQDHVHRRQ 128
             R  + +Q   +  QRQ QQ+   +   +  +QQ   Q   H++Q
Sbjct: 320 QQRQQQQRQQQRQQQQRQQQQQQQQQQRQQQQRQQQQQQQQQHQQQ 365



 Score = 22.6 bits (46), Expect = 7.1
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = -3

Query: 301 QAHKQKGPSRPQVDRPTKPQQNCIR*LQRQNQQESL 194
           Q  +Q+   + Q  +  + QQ C +  Q+Q QQ+ L
Sbjct: 192 QQQQQQQQQQQQQQQQRQQQQQCQQQRQQQPQQQQL 227



 Score = 22.2 bits (45), Expect = 9.4
 Identities = 15/64 (23%), Positives = 28/64 (43%)
 Frame = -3

Query: 301 QAHKQKGPSRPQVDRPTKPQQNCIR*LQRQNQQESLLEVYPRVGKQQSILQDHVHRRQTV 122
           Q  +Q+   + Q  +  + QQ   +  QRQ QQ+   +   +  + Q   Q     RQ++
Sbjct: 324 QQQRQQQRQQQQRQQQQQQQQQQRQQQQRQQQQQQQQQHQQQQQQWQQQQQQQQQPRQSL 383

Query: 121 PEAR 110
           P  +
Sbjct: 384 PHRK 387


>M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.
          Length = 613

 Score = 26.6 bits (56), Expect = 0.44
 Identities = 24/110 (21%), Positives = 42/110 (38%)
 Frame = -3

Query: 445 QGSREASDRKRQEEHHGIRLPVMDKGWKGNRQILLPHPV*SDLHRADCQAHKQKGPSRPQ 266
           QG ++   R++Q++H         +  +  +Q        +       Q  +Q+   R Q
Sbjct: 215 QGPQQQEQRQQQQQHQQREQQQQQQQQQQQQQQQQQQQQRNQQREWQQQQQQQQHQQREQ 274

Query: 265 VDRPTKPQQNCIR*LQRQNQQESLLEVYPRVGKQQSILQDHVHRRQTVPE 116
             +    QQN     QRQ QQ+       +  +QQ +    V RRQ   +
Sbjct: 275 QQQQRVQQQNQQH--QRQQQQQQQQRQQQQQQEQQELWTTVVRRRQNTQQ 322



 Score = 22.6 bits (46), Expect = 7.1
 Identities = 15/62 (24%), Positives = 26/62 (41%)
 Frame = -3

Query: 313 RADCQAHKQKGPSRPQVDRPTKPQQNCIR*LQRQNQQESLLEVYPRVGKQQSILQDHVHR 134
           R + Q  +Q    + Q  +  + Q   +R   +Q QQ+   + Y   G  Q   Q H  +
Sbjct: 317 RQNTQQQQQSNQPQQQQQQTGRYQPPQMRQQLQQQQQQRQPQRYVVAGSSQQQQQQHQQQ 376

Query: 133 RQ 128
           +Q
Sbjct: 377 QQ 378


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1977

 Score = 23.4 bits (48), Expect = 4.1
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -1

Query: 147  IMSTEDKQYLKLDNTKGXSDDRIXXGDST 61
            +M+ +D     +D T G SDD    GD T
Sbjct: 971  VMAGDDMMMESVDLTIGGSDDGSFAGDKT 999


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1978

 Score = 23.4 bits (48), Expect = 4.1
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -1

Query: 147  IMSTEDKQYLKLDNTKGXSDDRIXXGDST 61
            +M+ +D     +D T G SDD    GD T
Sbjct: 969  VMAGDDMMMESVDLTIGGSDDGSFAGDKT 997


>AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein
           protein.
          Length = 541

 Score = 23.4 bits (48), Expect = 4.1
 Identities = 22/112 (19%), Positives = 47/112 (41%), Gaps = 3/112 (2%)
 Frame = -3

Query: 445 QGSREASDRKRQEEHHGIRLPVMDKGWKGNRQILLPHPV*SDLHRADCQAH---KQKGPS 275
           Q +++  ++ R    H + LP  +      R  ++P    S++ R   +     K +   
Sbjct: 200 QRNQQEQEQPRASTSHAVMLPRSEAS-TAVRGDVVPELTFSEVVRRRYRGKATGKPRSQQ 258

Query: 274 RPQVDRPTKPQQNCIR*LQRQNQQESLLEVYPRVGKQQSILQDHVHRRQTVP 119
           +PQ  +  + +Q  ++  Q+Q QQ       P   +QQ+  Q    +++  P
Sbjct: 259 QPQQQQQPQQKQQQLQRRQQQQQQHQGQRYVPPQLRQQAHQQQQRQQQKVRP 310


>AY750997-1|AAV31069.1|  153|Anopheles gambiae peritrophin-1
           protein.
          Length = 153

 Score = 23.0 bits (47), Expect = 5.4
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -2

Query: 227 VTPKTKPARKSPGSLPP 177
           VTP T+PA K   + PP
Sbjct: 81  VTPNTEPASKPSPNCPP 97


>AY344823-1|AAR02434.1|  153|Anopheles gambiae peritrophin A
           protein.
          Length = 153

 Score = 23.0 bits (47), Expect = 5.4
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -2

Query: 227 VTPKTKPARKSPGSLPP 177
           VTP T+PA K   + PP
Sbjct: 81  VTPNTEPASKPSPNCPP 97


>AY344828-1|AAR02439.1|  153|Anopheles gambiae peritrophin A
           protein.
          Length = 153

 Score = 22.6 bits (46), Expect = 7.1
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -2

Query: 227 VTPKTKPARKSPGSLPP 177
           VTP T+PA K   + PP
Sbjct: 81  VTPNTEPAPKPSPNCPP 97


>AY344827-1|AAR02438.1|  153|Anopheles gambiae peritrophin A
           protein.
          Length = 153

 Score = 22.6 bits (46), Expect = 7.1
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -2

Query: 227 VTPKTKPARKSPGSLPP 177
           VTP T+PA K   + PP
Sbjct: 81  VTPNTEPAPKPSPNCPP 97


>AY344826-1|AAR02437.1|  153|Anopheles gambiae peritrophin A
           protein.
          Length = 153

 Score = 22.6 bits (46), Expect = 7.1
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -2

Query: 227 VTPKTKPARKSPGSLPP 177
           VTP T+PA K   + PP
Sbjct: 81  VTPNTEPAPKPSPNCPP 97


>AY344825-1|AAR02436.1|  153|Anopheles gambiae peritrophin A
           protein.
          Length = 153

 Score = 22.6 bits (46), Expect = 7.1
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -2

Query: 227 VTPKTKPARKSPGSLPP 177
           VTP T+PA K   + PP
Sbjct: 81  VTPNTEPAPKPSPNCPP 97


>AY344824-1|AAR02435.1|  153|Anopheles gambiae peritrophin A
           protein.
          Length = 153

 Score = 22.6 bits (46), Expect = 7.1
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -2

Query: 227 VTPKTKPARKSPGSLPP 177
           VTP T+PA K   + PP
Sbjct: 81  VTPNTEPAPKPSPNCPP 97


>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 22.2 bits (45), Expect = 9.4
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = -1

Query: 309 QTVKLINKRDHHALKLIDQQNHNKI 235
           +T+ L+N+   HAL    +Q H ++
Sbjct: 600 RTLNLLNRSTDHALLAQKRQEHQRL 624


>AF457547-1|AAL68777.1|  163|Anopheles gambiae selenoprotein
           protein.
          Length = 163

 Score = 22.2 bits (45), Expect = 9.4
 Identities = 7/22 (31%), Positives = 15/22 (68%)
 Frame = -3

Query: 244 QQNCIR*LQRQNQQESLLEVYP 179
           +++C+   Q+  + +S L+VYP
Sbjct: 53  KEHCLECCQKDTEADSKLKVYP 74


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 490,696
Number of Sequences: 2352
Number of extensions: 10855
Number of successful extensions: 41
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 41245467
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)